RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
PDLIM7-202ENST00000355841 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
PDLIM7-202ENST00000355841 Q6ZQT0 140 aa9.96□□□□□ -0.81
PDLIM7-202ENST00000355841 UBL5Q9BZL1 73 aa9.96□□□□□ -0.81
PDLIM7-202ENST00000355841 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
PDLIM7-202ENST00000355841 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
PDLIM7-202ENST00000355841 KRTAP13-3Q3SY46 172 aa9.93□□□□□ -0.82
PDLIM7-202ENST00000355841 SERP2Q8N6R1 65 aa9.91□□□□□ -0.82
PDLIM7-202ENST00000355841 A0A087WVE0 104 aa9.87□□□□□ -0.83
PDLIM7-202ENST00000355841 C9orf92A6NGG3 77 aa9.87□□□□□ -0.83
PDLIM7-202ENST00000355841 Q96NJ1 140 aa9.87□□□□□ -0.83
PDLIM7-202ENST00000355841 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
PDLIM7-202ENST00000355841 CXCL6P80162 114 aa9.83□□□□□ -0.84
PDLIM7-202ENST00000355841 Q6ZVQ6 151 aa9.83□□□□□ -0.84
PDLIM7-202ENST00000355841 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
PDLIM7-202ENST00000355841 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
PDLIM7-202ENST00000355841 XP32Q5T750 250 aa9.79□□□□□ -0.84
PDLIM7-202ENST00000355841 SMIM20Q8N5G0 67 aa9.79□□□□□ -0.84
PDLIM7-202ENST00000355841 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
PDLIM7-202ENST00000355841 TMEM258P61165 79 aa9.77□□□□□ -0.84
PDLIM7-202ENST00000355841 A0A1B0GW54 56 aa9.74□□□□□ -0.85
PDLIM7-202ENST00000355841 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
PDLIM7-202ENST00000355841 RPS28P62857 69 aaKnown RBP9.73□□□□□ -0.85
PDLIM7-202ENST00000355841 J3KT08 172 aa9.71□□□□□ -0.85
PDLIM7-202ENST00000355841 NREPQ16612 68 aa9.7□□□□□ -0.86
PDLIM7-202ENST00000355841 DSCR10P59022 87 aa9.69□□□□□ -0.86
PDLIM7-202ENST00000355841 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
PDLIM7-202ENST00000355841 MUC2Q02817 5179 aa9.68□□□□□ -0.86
PDLIM7-202ENST00000355841 MUC17Q685J3 4493 aa9.66□□□□□ -0.86
PDLIM7-202ENST00000355841 IGHV6-1A0A0B4J1U7 121 aa9.66□□□□□ -0.86
PDLIM7-202ENST00000355841 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
PDLIM7-202ENST00000355841 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
PDLIM7-202ENST00000355841 LINC00313P59037 77 aa9.62□□□□□ -0.87
PDLIM7-202ENST00000355841 SEC61BP60468 96 aaKnown RBP9.62□□□□□ -0.87
PDLIM7-202ENST00000355841 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
PDLIM7-202ENST00000355841 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
PDLIM7-202ENST00000355841 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
PDLIM7-202ENST00000355841 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
PDLIM7-202ENST00000355841 A8MWP4 228 aa9.59□□□□□ -0.87
PDLIM7-202ENST00000355841 BPY2O14599 106 aa9.58□□□□□ -0.88
PDLIM7-202ENST00000355841 NDUFB1O75438 58 aa9.58□□□□□ -0.88
PDLIM7-202ENST00000355841 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
PDLIM7-202ENST00000355841 NDUFC1O43677 76 aa9.56□□□□□ -0.88
PDLIM7-202ENST00000355841 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
PDLIM7-202ENST00000355841 FAM236DA0A1B0GTK5 79 aa9.55□□□□□ -0.88
PDLIM7-202ENST00000355841 H7BZZ5 65 aa9.55□□□□□ -0.88
PDLIM7-202ENST00000355841 FAM236CP0DP71 79 aa9.55□□□□□ -0.88
PDLIM7-202ENST00000355841 Q75L30 129 aa9.55□□□□□ -0.88
PDLIM7-202ENST00000355841 C8orf87E5RJ46 101 aa9.53□□□□□ -0.88
PDLIM7-202ENST00000355841 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
PDLIM7-202ENST00000355841 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
PDLIM7-202ENST00000355841 K7EQZ3 153 aa9.52□□□□□ -0.89
PDLIM7-202ENST00000355841 A8MUU9 505 aa9.51□□□□□ -0.89
PDLIM7-202ENST00000355841 Q8N9L7 120 aa9.51□□□□□ -0.89
PDLIM7-202ENST00000355841 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
PDLIM7-202ENST00000355841 ATP5EP56381 51 aaPredicted RBP9.49□□□□□ -0.89
PDLIM7-202ENST00000355841 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
PDLIM7-202ENST00000355841 OCR1Q9BZK8 76 aa9.48□□□□□ -0.89
PDLIM7-202ENST00000355841 SERP1Q9Y6X1 66 aa9.47□□□□□ -0.89
PDLIM7-202ENST00000355841 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.89
PDLIM7-202ENST00000355841 SNURFQ9Y675 71 aa9.45□□□□□ -0.9
PDLIM7-202ENST00000355841 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
PDLIM7-202ENST00000355841 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
PDLIM7-202ENST00000355841 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
PDLIM7-202ENST00000355841 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
PDLIM7-202ENST00000355841 WFDC13Q8IUB5 93 aa9.37□□□□□ -0.91
PDLIM7-202ENST00000355841 MRPL34Q9BQ48 92 aaKnown RBP9.36□□□□□ -0.91
PDLIM7-202ENST00000355841 CASC2Q6XLA1 102 aa9.33□□□□□ -0.92
PDLIM7-202ENST00000355841 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
PDLIM7-202ENST00000355841 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
PDLIM7-202ENST00000355841 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
PDLIM7-202ENST00000355841 SMIM26A0A096LP01 95 aa9.31□□□□□ -0.92
PDLIM7-202ENST00000355841 NDUFS5O43920 106 aa9.31□□□□□ -0.92
PDLIM7-202ENST00000355841 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
PDLIM7-202ENST00000355841 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
PDLIM7-202ENST00000355841 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
PDLIM7-202ENST00000355841 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
PDLIM7-202ENST00000355841 Q5W150 140 aa9.19□□□□□ -0.94
PDLIM7-202ENST00000355841 H3BPC8 53 aa9.17□□□□□ -0.94
PDLIM7-202ENST00000355841 MP68P56378 58 aa9.17□□□□□ -0.94
PDLIM7-202ENST00000355841 SPINK7P58062 85 aa9.16□□□□□ -0.94
PDLIM7-202ENST00000355841 COX6B2Q6YFQ2 88 aa9.13□□□□□ -0.95
PDLIM7-202ENST00000355841 CYP4F30PQ9H0H9 118 aa9.13□□□□□ -0.95
PDLIM7-202ENST00000355841 HRES1P13985 223 aa9.12□□□□□ -0.95
PDLIM7-202ENST00000355841 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
PDLIM7-202ENST00000355841 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
PDLIM7-202ENST00000355841 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
PDLIM7-202ENST00000355841 H0Y9P7 68 aa9.07□□□□□ -0.96
PDLIM7-202ENST00000355841 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
PDLIM7-202ENST00000355841 SPANXA2-OT1Q8N9U9 137 aa9.06□□□□□ -0.96
PDLIM7-202ENST00000355841 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
PDLIM7-202ENST00000355841 MT1HP80294 61 aa9.05□□□□□ -0.96
PDLIM7-202ENST00000355841 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
PDLIM7-202ENST00000355841 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
PDLIM7-202ENST00000355841 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
PDLIM7-202ENST00000355841 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
PDLIM7-202ENST00000355841 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
PDLIM7-202ENST00000355841 PRO0628Q9UI54 55 aa9□□□□□ -0.97
PDLIM7-202ENST00000355841 FLGP20930 4061 aaPredicted RBP8.99□□□□□ -0.97
PDLIM7-202ENST00000355841 Q1T7F1 81 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms