RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 TGP01266 2768 aa12.76□□□□□ -0.37
LIMS2-202ENST00000355119 A0A087X002 238 aa12.74□□□□□ -0.37
LIMS2-202ENST00000355119 NOTCH2NLQ7Z3S9 236 aa12.74□□□□□ -0.37
LIMS2-202ENST00000355119 Q1T7F1 81 aa12.72□□□□□ -0.37
LIMS2-202ENST00000355119 FRAS1Q86XX4 4008 aa12.72□□□□□ -0.37
LIMS2-202ENST00000355119 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
LIMS2-202ENST00000355119 C8orf87E5RJ46 101 aa12.69□□□□□ -0.38
LIMS2-202ENST00000355119 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
LIMS2-202ENST00000355119 DNAH11Q96DT5 4516 aa12.69□□□□□ -0.38
LIMS2-202ENST00000355119 DNAH5Q8TE73 4624 aa12.68□□□□□ -0.38
LIMS2-202ENST00000355119 KRTAP13-2Q52LG2 175 aa12.67□□□□□ -0.38
LIMS2-202ENST00000355119 PCOTHQ58A44 107 aa12.66□□□□□ -0.38
LIMS2-202ENST00000355119 V9GYY9 64 aa12.61□□□□□ -0.39
LIMS2-202ENST00000355119 PRO0628Q9UI54 55 aa12.6□□□□□ -0.39
LIMS2-202ENST00000355119 LOC101927531A0A1B0GV80 90 aa12.58□□□□□ -0.4
LIMS2-202ENST00000355119 KRTAP1-4P0C5Y4 121 aa12.58□□□□□ -0.4
LIMS2-202ENST00000355119 C1orf195Q5TG92 126 aa12.57□□□□□ -0.4
LIMS2-202ENST00000355119 PKD1P98161 4303 aa12.56□□□□□ -0.4
LIMS2-202ENST00000355119 LINC00313P59037 77 aa12.55□□□□□ -0.4
LIMS2-202ENST00000355119 KRTAP13-3Q3SY46 172 aa12.55□□□□□ -0.4
LIMS2-202ENST00000355119 COA5Q86WW8 74 aa12.55□□□□□ -0.4
LIMS2-202ENST00000355119 LIMD2Q9BT23 127 aa12.55□□□□□ -0.4
LIMS2-202ENST00000355119 Q5W150 140 aa12.54□□□□□ -0.4
LIMS2-202ENST00000355119 BRK1Q8WUW1 75 aa12.52□□□□□ -0.4
LIMS2-202ENST00000355119 FAT2Q9NYQ8 4349 aa12.5□□□□□ -0.41
LIMS2-202ENST00000355119 Q8N9P0 234 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-202ENST00000355119 PSPHP1O15172 72 aa12.47□□□□□ -0.41
LIMS2-202ENST00000355119 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
LIMS2-202ENST00000355119 C4orf48Q5BLP8 95 aa12.45□□□□□ -0.42
LIMS2-202ENST00000355119 LRP1BQ9NZR2 4599 aa12.44□□□□□ -0.42
LIMS2-202ENST00000355119 HYDINQ4G0P3 5121 aa12.44□□□□□ -0.42
LIMS2-202ENST00000355119 FAM229AH3BQW9 127 aa12.44□□□□□ -0.42
LIMS2-202ENST00000355119 TYMSOSQ8TAI1 123 aa12.44□□□□□ -0.42
LIMS2-202ENST00000355119 A8MUN3 132 aa12.41□□□□□ -0.42
LIMS2-202ENST00000355119 SPINK1P00995 79 aa12.4□□□□□ -0.42
LIMS2-202ENST00000355119 KRTAP16-1A8MUX0 517 aa12.39□□□□□ -0.43
LIMS2-202ENST00000355119 HRES1P13985 223 aa12.38□□□□□ -0.43
LIMS2-202ENST00000355119 Q5VV11 94 aa12.35□□□□□ -0.43
LIMS2-202ENST00000355119 PRR15LQ9BU68 103 aa12.33□□□□□ -0.44
LIMS2-202ENST00000355119 IGKV2-30P06310 120 aa12.31□□□□□ -0.44
LIMS2-202ENST00000355119 RPS29P62273 56 aaKnown RBP12.3□□□□□ -0.44
LIMS2-202ENST00000355119 RETNLBQ9BQ08 111 aa12.3□□□□□ -0.44
LIMS2-202ENST00000355119 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
LIMS2-202ENST00000355119 SPAG11AQ6PDA7 123 aa12.27□□□□□ -0.44
LIMS2-202ENST00000355119 ACYP2P14621 99 aa12.27□□□□□ -0.45
LIMS2-202ENST00000355119 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
LIMS2-202ENST00000355119 LINC01558Q9Y6Z2 57 aa12.27□□□□□ -0.45
LIMS2-202ENST00000355119 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
LIMS2-202ENST00000355119 A0A1B0GVY2 172 aa12.25□□□□□ -0.45
LIMS2-202ENST00000355119 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
LIMS2-202ENST00000355119 Q75L30 129 aa12.23□□□□□ -0.45
LIMS2-202ENST00000355119 DMAC1Q96GE9 116 aa12.23□□□□□ -0.45
LIMS2-202ENST00000355119 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.46
LIMS2-202ENST00000355119 SACSQ9NZJ4 4579 aa12.17□□□□□ -0.46
LIMS2-202ENST00000355119 IGKV2D-30A0A075B6S6 120 aa12.12□□□□□ -0.47
LIMS2-202ENST00000355119 KRTAP10-4P60372 401 aaPredicted RBP12.11□□□□□ -0.47
LIMS2-202ENST00000355119 A6NED7 52 aa12.08□□□□□ -0.48
LIMS2-202ENST00000355119 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
LIMS2-202ENST00000355119 KMT2CQ8NEZ4 4911 aaKnown RBP12.06□□□□□ -0.48
LIMS2-202ENST00000355119 PKHD1P08F94 4074 aa12.05□□□□□ -0.48
LIMS2-202ENST00000355119 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
LIMS2-202ENST00000355119 A8MU10 97 aa11.99□□□□□ -0.49
LIMS2-202ENST00000355119 LCA10Q71F78 164 aa11.98□□□□□ -0.49
LIMS2-202ENST00000355119 CDC42SE1Q9NRR8 79 aa11.96□□□□□ -0.49
LIMS2-202ENST00000355119 A8MUU9 505 aa11.93□□□□□ -0.5
LIMS2-202ENST00000355119 C20orf166-AS1Q96NR2 134 aa11.93□□□□□ -0.5
LIMS2-202ENST00000355119 APOBP04114 4563 aaKnown RBP11.92□□□□□ -0.5
LIMS2-202ENST00000355119 SPINK7P58062 85 aa11.91□□□□□ -0.5
LIMS2-202ENST00000355119 C9orf92A6NGG3 77 aa11.91□□□□□ -0.5
LIMS2-202ENST00000355119 ATP11AUNQ6ZP68 121 aa11.9□□□□□ -0.5
LIMS2-202ENST00000355119 PKHD1L1Q86WI1 4243 aa11.87□□□□□ -0.51
LIMS2-202ENST00000355119 A0A1B0GU69 56 aa11.85□□□□□ -0.51
LIMS2-202ENST00000355119 RYR2Q92736 4967 aa11.84□□□□□ -0.51
LIMS2-202ENST00000355119 PMAIP1Q13794 54 aa11.84□□□□□ -0.51
LIMS2-202ENST00000355119 SPTSSBQ8NFR3 76 aa11.84□□□□□ -0.51
LIMS2-202ENST00000355119 RYR3Q15413 4870 aa11.83□□□□□ -0.52
LIMS2-202ENST00000355119 FAT1Q14517 4588 aa11.8□□□□□ -0.52
LIMS2-202ENST00000355119 Q8N1X5 172 aa11.79□□□□□ -0.52
LIMS2-202ENST00000355119 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
LIMS2-202ENST00000355119 A6NN06 94 aa11.67□□□□□ -0.54
LIMS2-202ENST00000355119 Q5VSD8 79 aa11.67□□□□□ -0.54
LIMS2-202ENST00000355119 SPATA8Q6RVD6 105 aa11.62□□□□□ -0.55
LIMS2-202ENST00000355119 UQCR11O14957 56 aa11.61□□□□□ -0.55
LIMS2-202ENST00000355119 FLG2Q5D862 2391 aaPredicted RBP11.59□□□□□ -0.55
LIMS2-202ENST00000355119 KRTAP3-1Q9BYR8 98 aa11.58□□□□□ -0.56
LIMS2-202ENST00000355119 SEC61GP60059 68 aa11.57□□□□□ -0.56
LIMS2-202ENST00000355119 KTN1-AS1Q86SY8 53 aa11.57□□□□□ -0.56
LIMS2-202ENST00000355119 MIR22HGQ0VDD5 57 aa11.56□□□□□ -0.56
LIMS2-202ENST00000355119 COX6B2Q6YFQ2 88 aa11.5□□□□□ -0.57
LIMS2-202ENST00000355119 FAT3Q8TDW7 4589 aa11.45□□□□□ -0.58
LIMS2-202ENST00000355119 RPL37P61927 97 aaKnown RBP11.45□□□□□ -0.58
LIMS2-202ENST00000355119 TNXBP22105 4242 aa11.45□□□□□ -0.58
LIMS2-202ENST00000355119 HSPG2P98160 4391 aa11.43□□□□□ -0.58
LIMS2-202ENST00000355119 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
LIMS2-202ENST00000355119 XP32Q5T750 250 aa11.38□□□□□ -0.59
LIMS2-202ENST00000355119 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
LIMS2-202ENST00000355119 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
LIMS2-202ENST00000355119 MT1HL1P0DM35 61 aa11.32□□□□□ -0.6
LIMS2-202ENST00000355119 RYR1P21817 5038 aa11.31□□□□□ -0.6
LIMS2-202ENST00000355119 A0A1B0GU33 70 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms