RNA–Protein interactions for RNA: ENST00000354833.7

SERF1A-202, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 1 (best) BASIC

Gene SERF1A, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-202ENST00000354833 HSPG2P98160 4391 aa13.94□□□□□ -0.18
SERF1A-202ENST00000354833 LINC00304Q8N9R0 145 aa13.93□□□□□ -0.18
SERF1A-202ENST00000354833 KLKP1Q107X0 134 aa13.92□□□□□ -0.18
SERF1A-202ENST00000354833 SPAG11AQ6PDA7 123 aa13.91□□□□□ -0.18
SERF1A-202ENST00000354833 TMEM254Q8TBM7 123 aa13.91□□□□□ -0.18
SERF1A-202ENST00000354833 Q5VSD8 79 aa13.91□□□□□ -0.18
SERF1A-202ENST00000354833 PKHD1L1Q86WI1 4243 aa13.89□□□□□ -0.19
SERF1A-202ENST00000354833 RPS29P62273 56 aaKnown RBP13.89□□□□□ -0.19
SERF1A-202ENST00000354833 NOTCH2NLQ7Z3S9 236 aa13.88□□□□□ -0.19
SERF1A-202ENST00000354833 SNURFQ9Y675 71 aa13.88□□□□□ -0.19
SERF1A-202ENST00000354833 RYR1P21817 5038 aa13.86□□□□□ -0.19
SERF1A-202ENST00000354833 C5orf47Q569G3 176 aa13.84□□□□□ -0.19
SERF1A-202ENST00000354833 A0A0U1RQV1 116 aa13.84□□□□□ -0.19
SERF1A-202ENST00000354833 C8orf87E5RJ46 101 aa13.82□□□□□ -0.2
SERF1A-202ENST00000354833 MRPL34Q9BQ48 92 aaKnown RBP13.82□□□□□ -0.2
SERF1A-202ENST00000354833 H7BZZ5 65 aa13.77□□□□□ -0.21
SERF1A-202ENST00000354833 TMEM258P61165 79 aa13.76□□□□□ -0.21
SERF1A-202ENST00000354833 TP53AIP1Q9HCN2 124 aa13.76□□□□□ -0.21
SERF1A-202ENST00000354833 NDUFC1O43677 76 aa13.75□□□□□ -0.21
SERF1A-202ENST00000354833 LINC00313P59037 77 aa13.75□□□□□ -0.21
SERF1A-202ENST00000354833 KRTAP17-1Q9BYP8 105 aa13.74□□□□□ -0.21
SERF1A-202ENST00000354833 MP68P56378 58 aa13.73□□□□□ -0.21
SERF1A-202ENST00000354833 NDUFS5O43920 106 aa13.72□□□□□ -0.21
SERF1A-202ENST00000354833 EPPK1P58107 5090 aaKnown RBP13.71□□□□□ -0.21
SERF1A-202ENST00000354833 ZCCHC13Q8WW36 166 aaKnown RBP13.71□□□□□ -0.21
SERF1A-202ENST00000354833 H0Y9P7 68 aa13.7□□□□□ -0.22
SERF1A-202ENST00000354833 KIAA1109Q2LD37 5005 aa13.69□□□□□ -0.22
SERF1A-202ENST00000354833 TRAV22A0A0B4J277 110 aa13.68□□□□□ -0.22
SERF1A-202ENST00000354833 Q8N1X5 172 aa13.68□□□□□ -0.22
SERF1A-202ENST00000354833 H3BPC8 53 aa13.65□□□□□ -0.22
SERF1A-202ENST00000354833 KRTAP10-8P60410 259 aa13.65□□□□□ -0.22
SERF1A-202ENST00000354833 LINC00208Q96KT6 92 aa13.64□□□□□ -0.23
SERF1A-202ENST00000354833 KRTAP16-1A8MUX0 517 aa13.61□□□□□ -0.23
SERF1A-202ENST00000354833 Q8N9P0 234 aaPredicted RBP13.6□□□□□ -0.23
SERF1A-202ENST00000354833 LRP1Q07954 4544 aaKnown RBP13.58□□□□□ -0.23
SERF1A-202ENST00000354833 FAM236DA0A1B0GTK5 79 aa13.58□□□□□ -0.24
SERF1A-202ENST00000354833 FAM236CP0DP71 79 aa13.58□□□□□ -0.24
SERF1A-202ENST00000354833 C1orf64Q8NEQ6 169 aa13.57□□□□□ -0.24
SERF1A-202ENST00000354833 TNXBP22105 4242 aa13.57□□□□□ -0.24
SERF1A-202ENST00000354833 FAT3Q8TDW7 4589 aa13.51□□□□□ -0.25
SERF1A-202ENST00000354833 Q5W150 140 aa13.5□□□□□ -0.25
SERF1A-202ENST00000354833 ATP5EP56381 51 aaPredicted RBP13.49□□□□□ -0.25
SERF1A-202ENST00000354833 KRTAP13-3Q3SY46 172 aa13.49□□□□□ -0.25
SERF1A-202ENST00000354833 RETNLBQ9BQ08 111 aa13.49□□□□□ -0.25
SERF1A-202ENST00000354833 FLG2Q5D862 2391 aaPredicted RBP13.47□□□□□ -0.25
SERF1A-202ENST00000354833 MT1HL1P0DM35 61 aa13.41□□□□□ -0.26
SERF1A-202ENST00000354833 RPS28P62857 69 aaKnown RBP13.4□□□□□ -0.26
SERF1A-202ENST00000354833 LOC101927531A0A1B0GV80 90 aa13.38□□□□□ -0.27
SERF1A-202ENST00000354833 C9orf92A6NGG3 77 aa13.36□□□□□ -0.27
SERF1A-202ENST00000354833 MYCBP2O75592 4640 aa13.36□□□□□ -0.27
SERF1A-202ENST00000354833 SPANXA2-OT1Q8N9U9 137 aa13.33□□□□□ -0.27
SERF1A-202ENST00000354833 SERP1Q9Y6X1 66 aa13.33□□□□□ -0.27
SERF1A-202ENST00000354833 PCOTHQ58A44 107 aa13.33□□□□□ -0.28
SERF1A-202ENST00000354833 OXTP01178 125 aa13.31□□□□□ -0.28
SERF1A-202ENST00000354833 KRTAP4-5Q9BYR2 181 aa13.31□□□□□ -0.28
SERF1A-202ENST00000354833 FP248Q71RG6 208 aaPredicted RBP13.3□□□□□ -0.28
SERF1A-202ENST00000354833 C20orf166-AS1Q96NR2 134 aa13.29□□□□□ -0.28
SERF1A-202ENST00000354833 CYP4F30PQ9H0H9 118 aa13.29□□□□□ -0.28
SERF1A-202ENST00000354833 PRR4Q16378 134 aa13.27□□□□□ -0.28
SERF1A-202ENST00000354833 A8MUU9 505 aa13.27□□□□□ -0.29
SERF1A-202ENST00000354833 IGLV7-46A0A075B6I9 117 aa13.24□□□□□ -0.29
SERF1A-202ENST00000354833 IGKV2-30P06310 120 aa13.24□□□□□ -0.29
SERF1A-202ENST00000354833 DMBT1Q9UGM3 2413 aaPredicted RBP13.21□□□□□ -0.29
SERF1A-202ENST00000354833 Q75L30 129 aa13.14□□□□□ -0.31
SERF1A-202ENST00000354833 IGKV2D-30A0A075B6S6 120 aa13.13□□□□□ -0.31
SERF1A-202ENST00000354833 BIRC6Q9NR09 4857 aa13.11□□□□□ -0.31
SERF1A-202ENST00000354833 HRES1P13985 223 aa13.08□□□□□ -0.32
SERF1A-202ENST00000354833 C7orf65Q6ZTY9 151 aa13.06□□□□□ -0.32
SERF1A-202ENST00000354833 HERC2O95714 4834 aa13.03□□□□□ -0.32
SERF1A-202ENST00000354833 ABCA13Q86UQ4 5058 aa13.01□□□□□ -0.33
SERF1A-202ENST00000354833 SMIM26A0A096LP01 95 aa13.01□□□□□ -0.33
SERF1A-202ENST00000354833 XP32Q5T750 250 aa12.99□□□□□ -0.33
SERF1A-202ENST00000354833 RPL37P61927 97 aaKnown RBP12.96□□□□□ -0.33
SERF1A-202ENST00000354833 COA5Q86WW8 74 aa12.95□□□□□ -0.34
SERF1A-202ENST00000354833 ATP11AUNQ6ZP68 121 aa12.93□□□□□ -0.34
SERF1A-202ENST00000354833 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
SERF1A-202ENST00000354833 TPRXLQ17RH7 258 aa12.9□□□□□ -0.34
SERF1A-202ENST00000354833 J3QL48 77 aa12.89□□□□□ -0.35
SERF1A-202ENST00000354833 ACYP2P14621 99 aa12.88□□□□□ -0.35
SERF1A-202ENST00000354833 SPINK7P58062 85 aa12.88□□□□□ -0.35
SERF1A-202ENST00000354833 C4orf26Q17RF5 130 aa12.78□□□□□ -0.36
SERF1A-202ENST00000354833 MPLKIPQ8TAP9 179 aa12.78□□□□□ -0.36
SERF1A-202ENST00000354833 Q1T7F1 81 aa12.72□□□□□ -0.37
SERF1A-202ENST00000354833 A8MUN3 132 aa12.72□□□□□ -0.37
SERF1A-202ENST00000354833 CHKB-CPT1BH3BT56 60 aa12.68□□□□□ -0.38
SERF1A-202ENST00000354833 V9GYY9 64 aa12.64□□□□□ -0.39
SERF1A-202ENST00000354833 LPAP08519 4548 aa12.63□□□□□ -0.39
SERF1A-202ENST00000354833 KRTAP3-1Q9BYR8 98 aa12.61□□□□□ -0.39
SERF1A-202ENST00000354833 LRP2P98164 4655 aa12.6□□□□□ -0.39
SERF1A-202ENST00000354833 COX6B2Q6YFQ2 88 aa12.59□□□□□ -0.39
SERF1A-202ENST00000354833 LINC01558Q9Y6Z2 57 aa12.5□□□□□ -0.41
SERF1A-202ENST00000354833 PCLOQ9Y6V0 5065 aa12.49□□□□□ -0.41
SERF1A-202ENST00000354833 PSPHP1O15172 72 aa12.48□□□□□ -0.41
SERF1A-202ENST00000354833 SEC61BP60468 96 aaKnown RBP12.44□□□□□ -0.42
SERF1A-202ENST00000354833 PRR15LQ9BU68 103 aa12.43□□□□□ -0.42
SERF1A-202ENST00000354833 Q5VV11 94 aa12.38□□□□□ -0.43
SERF1A-202ENST00000354833 SPTSSBQ8NFR3 76 aa12.36□□□□□ -0.43
SERF1A-202ENST00000354833 HERC1Q15751 4861 aa12.26□□□□□ -0.45
SERF1A-202ENST00000354833 RBM12B-AS1Q9P1G2 102 aa12.26□□□□□ -0.45
SERF1A-202ENST00000354833 A0A1B0GU69 56 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms