RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 DNAH6Q9C0G6 4158 aa11.61□□□□□ -0.55
COL13A1-201ENST00000354547 DNHD1Q96M86 4753 aa11.6□□□□□ -0.55
COL13A1-201ENST00000354547 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
COL13A1-201ENST00000354547 CD164Q04900 197 aa11.57□□□□□ -0.56
COL13A1-201ENST00000354547 TP53AIP1Q9HCN2 124 aa11.57□□□□□ -0.56
COL13A1-201ENST00000354547 ASB16-AS1Q495Z4 193 aa11.57□□□□□ -0.56
COL13A1-201ENST00000354547 MRPL34Q9BQ48 92 aaKnown RBP11.57□□□□□ -0.56
COL13A1-201ENST00000354547 SEC61GP60059 68 aa11.54□□□□□ -0.56
COL13A1-201ENST00000354547 KRTAP10-2P60368 255 aa11.54□□□□□ -0.56
COL13A1-201ENST00000354547 COA5Q86WW8 74 aa11.54□□□□□ -0.56
COL13A1-201ENST00000354547 DNAH11Q96DT5 4516 aa11.52□□□□□ -0.57
COL13A1-201ENST00000354547 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
COL13A1-201ENST00000354547 Q8N9P0 234 aaPredicted RBP11.49□□□□□ -0.57
COL13A1-201ENST00000354547 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
COL13A1-201ENST00000354547 ALMS1Q8TCU4 4167 aa11.46□□□□□ -0.57
COL13A1-201ENST00000354547 A8MU10 97 aa11.46□□□□□ -0.58
COL13A1-201ENST00000354547 V9GYY9 64 aa11.46□□□□□ -0.58
COL13A1-201ENST00000354547 Q5W150 140 aa11.45□□□□□ -0.58
COL13A1-201ENST00000354547 Q5VV11 94 aa11.45□□□□□ -0.58
COL13A1-201ENST00000354547 RETNLBQ9BQ08 111 aa11.44□□□□□ -0.58
COL13A1-201ENST00000354547 DNAH5Q8TE73 4624 aa11.43□□□□□ -0.58
COL13A1-201ENST00000354547 CHKB-CPT1BH3BT56 60 aa11.43□□□□□ -0.58
COL13A1-201ENST00000354547 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
COL13A1-201ENST00000354547 C1orf195Q5TG92 126 aa11.39□□□□□ -0.59
COL13A1-201ENST00000354547 LIMD2Q9BT23 127 aa11.38□□□□□ -0.59
COL13A1-201ENST00000354547 LRP1BQ9NZR2 4599 aa11.37□□□□□ -0.59
COL13A1-201ENST00000354547 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
COL13A1-201ENST00000354547 HRES1P13985 223 aa11.35□□□□□ -0.59
COL13A1-201ENST00000354547 KRTAP10-1P60331 282 aa11.35□□□□□ -0.59
COL13A1-201ENST00000354547 KRTAP13-2Q52LG2 175 aa11.33□□□□□ -0.6
COL13A1-201ENST00000354547 HYDINQ4G0P3 5121 aa11.32□□□□□ -0.6
COL13A1-201ENST00000354547 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
COL13A1-201ENST00000354547 LINC00313P59037 77 aa11.3□□□□□ -0.6
COL13A1-201ENST00000354547 A6NED7 52 aa11.28□□□□□ -0.6
COL13A1-201ENST00000354547 PRR26Q8N8Z3 221 aa11.27□□□□□ -0.61
COL13A1-201ENST00000354547 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
COL13A1-201ENST00000354547 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
COL13A1-201ENST00000354547 PKD1P98161 4303 aa11.24□□□□□ -0.61
COL13A1-201ENST00000354547 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
COL13A1-201ENST00000354547 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
COL13A1-201ENST00000354547 Q75L30 129 aa11.2□□□□□ -0.62
COL13A1-201ENST00000354547 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
COL13A1-201ENST00000354547 Q6ZSA8 131 aa11.19□□□□□ -0.62
COL13A1-201ENST00000354547 LCA10Q71F78 164 aa11.19□□□□□ -0.62
COL13A1-201ENST00000354547 PMAIP1Q13794 54 aa11.18□□□□□ -0.62
COL13A1-201ENST00000354547 LINC01558Q9Y6Z2 57 aa11.17□□□□□ -0.62
COL13A1-201ENST00000354547 PLA2G1BP04054 148 aaKnown RBP11.17□□□□□ -0.62
COL13A1-201ENST00000354547 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
COL13A1-201ENST00000354547 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
COL13A1-201ENST00000354547 ACYP2P14621 99 aa11.12□□□□□ -0.63
COL13A1-201ENST00000354547 IGKV2D-30A0A075B6S6 120 aa11.12□□□□□ -0.63
COL13A1-201ENST00000354547 IGKV2-30P06310 120 aa11.12□□□□□ -0.63
COL13A1-201ENST00000354547 SPINK7P58062 85 aa11.11□□□□□ -0.63
COL13A1-201ENST00000354547 TYMSOSQ8TAI1 123 aa11.1□□□□□ -0.63
COL13A1-201ENST00000354547 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
COL13A1-201ENST00000354547 H3BS24 57 aa11.09□□□□□ -0.63
COL13A1-201ENST00000354547 KRTAP16-1A8MUX0 517 aa11.07□□□□□ -0.64
COL13A1-201ENST00000354547 SMR3BP02814 79 aaPredicted RBP11.03□□□□□ -0.64
COL13A1-201ENST00000354547 DMAC1Q96GE9 116 aa11.03□□□□□ -0.64
COL13A1-201ENST00000354547 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
COL13A1-201ENST00000354547 ATP11AUNQ6ZP68 121 aa10.98□□□□□ -0.65
COL13A1-201ENST00000354547 SPINK1P00995 79 aa10.95□□□□□ -0.66
COL13A1-201ENST00000354547 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
COL13A1-201ENST00000354547 A0A0A0MQY5 61 aa10.92□□□□□ -0.66
COL13A1-201ENST00000354547 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
COL13A1-201ENST00000354547 A0A1B0GU69 56 aa10.89□□□□□ -0.67
COL13A1-201ENST00000354547 FAT1Q14517 4588 aa10.87□□□□□ -0.67
COL13A1-201ENST00000354547 Q8N1X5 172 aa10.87□□□□□ -0.67
COL13A1-201ENST00000354547 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
COL13A1-201ENST00000354547 C9orf92A6NGG3 77 aa10.86□□□□□ -0.67
COL13A1-201ENST00000354547 A6NN06 94 aa10.84□□□□□ -0.67
COL13A1-201ENST00000354547 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
COL13A1-201ENST00000354547 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
COL13A1-201ENST00000354547 MIR22HGQ0VDD5 57 aa10.65□□□□□ -0.7
COL13A1-201ENST00000354547 UQCR11O14957 56 aa10.64□□□□□ -0.71
COL13A1-201ENST00000354547 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
COL13A1-201ENST00000354547 RPS29P62273 56 aaKnown RBP10.63□□□□□ -0.71
COL13A1-201ENST00000354547 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
COL13A1-201ENST00000354547 RBM12B-AS1Q9P1G2 102 aa10.6□□□□□ -0.71
COL13A1-201ENST00000354547 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
COL13A1-201ENST00000354547 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
COL13A1-201ENST00000354547 A8MUU9 505 aa10.55□□□□□ -0.72
COL13A1-201ENST00000354547 PRAC1Q96KF2 57 aa10.55□□□□□ -0.72
COL13A1-201ENST00000354547 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
COL13A1-201ENST00000354547 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
COL13A1-201ENST00000354547 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.73
COL13A1-201ENST00000354547 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.73
COL13A1-201ENST00000354547 KMT2CQ8NEZ4 4911 aaKnown RBP10.5□□□□□ -0.73
COL13A1-201ENST00000354547 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
COL13A1-201ENST00000354547 KRTAP3-3Q9BYR6 98 aa10.48□□□□□ -0.73
COL13A1-201ENST00000354547 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
COL13A1-201ENST00000354547 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
COL13A1-201ENST00000354547 KRTAP21-3Q3LHN1 58 aa10.48□□□□□ -0.73
COL13A1-201ENST00000354547 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
COL13A1-201ENST00000354547 RYR2Q92736 4967 aa10.44□□□□□ -0.74
COL13A1-201ENST00000354547 MYCBP2O75592 4640 aa10.33□□□□□ -0.76
COL13A1-201ENST00000354547 H0YAA0 97 aa10.31□□□□□ -0.76
COL13A1-201ENST00000354547 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
COL13A1-201ENST00000354547 A0A1B0GU33 70 aa10.29□□□□□ -0.76
COL13A1-201ENST00000354547 HSPG2P98160 4391 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms