RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
RTN3-204ENST00000354497 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.33
RTN3-204ENST00000354497 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
RTN3-204ENST00000354497 Q5VV11 94 aa6.76□□□□□ -1.33
RTN3-204ENST00000354497 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
RTN3-204ENST00000354497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.76□□□□□ -1.33
RTN3-204ENST00000354497 A0A1B0GW54 56 aa6.76□□□□□ -1.33
RTN3-204ENST00000354497 LINC00242Q5T6M2 205 aa6.76□□□□□ -1.33
RTN3-204ENST00000354497 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
RTN3-204ENST00000354497 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
RTN3-204ENST00000354497 H0Y9J4 135 aa6.75□□□□□ -1.33
RTN3-204ENST00000354497 NDUFB1O75438 58 aa6.75□□□□□ -1.33
RTN3-204ENST00000354497 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
RTN3-204ENST00000354497 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
RTN3-204ENST00000354497 Q75L30 129 aa6.74□□□□□ -1.33
RTN3-204ENST00000354497 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
RTN3-204ENST00000354497 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
RTN3-204ENST00000354497 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
RTN3-204ENST00000354497 A8MUN3 132 aa6.71□□□□□ -1.34
RTN3-204ENST00000354497 NKAPP1Q8N9T2 125 aa6.71□□□□□ -1.34
RTN3-204ENST00000354497 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
RTN3-204ENST00000354497 Q9BRP9 147 aa6.71□□□□□ -1.34
RTN3-204ENST00000354497 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
RTN3-204ENST00000354497 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
RTN3-204ENST00000354497 HCG22E2RYF7 251 aa6.68□□□□□ -1.34
RTN3-204ENST00000354497 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
RTN3-204ENST00000354497 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
RTN3-204ENST00000354497 PSPHP1O15172 72 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 LINC00575Q6W349 94 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 KRTAP11-1Q8IUC1 163 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
RTN3-204ENST00000354497 FAM168BA1KXE4 195 aa6.66□□□□□ -1.34
RTN3-204ENST00000354497 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
RTN3-204ENST00000354497 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
RTN3-204ENST00000354497 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.35
RTN3-204ENST00000354497 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
RTN3-204ENST00000354497 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
RTN3-204ENST00000354497 H3BPC8 53 aa6.63□□□□□ -1.35
RTN3-204ENST00000354497 COX7BP24311 80 aa6.63□□□□□ -1.35
RTN3-204ENST00000354497 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
RTN3-204ENST00000354497 LINC00158P58513 81 aa6.62□□□□□ -1.35
RTN3-204ENST00000354497 COX17Q14061 63 aa6.62□□□□□ -1.35
RTN3-204ENST00000354497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.62□□□□□ -1.35
RTN3-204ENST00000354497 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
RTN3-204ENST00000354497 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
RTN3-204ENST00000354497 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
RTN3-204ENST00000354497 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
RTN3-204ENST00000354497 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
RTN3-204ENST00000354497 TYMSOSQ8TAI1 123 aa6.59□□□□□ -1.36
RTN3-204ENST00000354497 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
RTN3-204ENST00000354497 IGHV3OR16-9A0A0B4J2B5 98 aa6.56□□□□□ -1.36
RTN3-204ENST00000354497 ZNF861PO60384 105 aa6.56□□□□□ -1.36
RTN3-204ENST00000354497 C10orf25Q5T742 122 aa6.56□□□□□ -1.36
RTN3-204ENST00000354497 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
RTN3-204ENST00000354497 MOBPQ13875 183 aa6.55□□□□□ -1.36
RTN3-204ENST00000354497 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
RTN3-204ENST00000354497 LINC00208Q96KT6 92 aa6.55□□□□□ -1.36
RTN3-204ENST00000354497 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
RTN3-204ENST00000354497 Q8IZM0 81 aa6.54□□□□□ -1.36
RTN3-204ENST00000354497 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
RTN3-204ENST00000354497 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
RTN3-204ENST00000354497 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
RTN3-204ENST00000354497 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
RTN3-204ENST00000354497 A6NED7 52 aa6.53□□□□□ -1.36
RTN3-204ENST00000354497 TLX1NBP0CAT3 122 aa6.53□□□□□ -1.36
RTN3-204ENST00000354497 MP68P56378 58 aa6.53□□□□□ -1.36
RTN3-204ENST00000354497 A8MU10 97 aa6.52□□□□□ -1.37
RTN3-204ENST00000354497 LINC00313P59037 77 aa6.52□□□□□ -1.37
RTN3-204ENST00000354497 TPRXLQ17RH7 258 aa6.52□□□□□ -1.37
RTN3-204ENST00000354497 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
RTN3-204ENST00000354497 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
RTN3-204ENST00000354497 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
RTN3-204ENST00000354497 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
RTN3-204ENST00000354497 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
RTN3-204ENST00000354497 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
RTN3-204ENST00000354497 SMIM29Q86T20 159 aa6.48□□□□□ -1.37
RTN3-204ENST00000354497 Q6ZQY7 126 aa6.47□□□□□ -1.37
RTN3-204ENST00000354497 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
RTN3-204ENST00000354497 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
RTN3-204ENST00000354497 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
RTN3-204ENST00000354497 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
RTN3-204ENST00000354497 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
RTN3-204ENST00000354497 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
RTN3-204ENST00000354497 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
RTN3-204ENST00000354497 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
RTN3-204ENST00000354497 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.39
RTN3-204ENST00000354497 Q8N9L7 120 aa6.38□□□□□ -1.39
RTN3-204ENST00000354497 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
RTN3-204ENST00000354497 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
RTN3-204ENST00000354497 SEC61BP60468 96 aaKnown RBP6.36□□□□□ -1.39
RTN3-204ENST00000354497 COA5Q86WW8 74 aa6.36□□□□□ -1.39
RTN3-204ENST00000354497 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
RTN3-204ENST00000354497 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
RTN3-204ENST00000354497 DSCR10P59022 87 aa6.34□□□□□ -1.39
RTN3-204ENST00000354497 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
RTN3-204ENST00000354497 PRLHP81277 87 aa6.33□□□□□ -1.4
RTN3-204ENST00000354497 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
RTN3-204ENST00000354497 Q8NBF4 154 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms