RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 PSPHP1O15172 72 aa13.03□□□□□ -0.32
NKX2-4-201ENST00000351817 DNAH6Q9C0G6 4158 aa13.01□□□□□ -0.33
NKX2-4-201ENST00000351817 PCOTHQ58A44 107 aa13□□□□□ -0.33
NKX2-4-201ENST00000351817 DNAH8Q96JB1 4490 aa12.99□□□□□ -0.33
NKX2-4-201ENST00000351817 A0A087X002 238 aa12.98□□□□□ -0.33
NKX2-4-201ENST00000351817 CD164Q04900 197 aa12.98□□□□□ -0.33
NKX2-4-201ENST00000351817 NOTCH2NLQ7Z3S9 236 aa12.98□□□□□ -0.33
NKX2-4-201ENST00000351817 COA5Q86WW8 74 aa12.96□□□□□ -0.33
NKX2-4-201ENST00000351817 Q8N9P0 234 aaPredicted RBP12.95□□□□□ -0.34
NKX2-4-201ENST00000351817 A8MUN3 132 aa12.94□□□□□ -0.34
NKX2-4-201ENST00000351817 CIRBP-AS1Q8TBR5 109 aa12.94□□□□□ -0.34
NKX2-4-201ENST00000351817 SPINK6Q6UWN8 80 aa12.93□□□□□ -0.34
NKX2-4-201ENST00000351817 LIMD2Q9BT23 127 aa12.93□□□□□ -0.34
NKX2-4-201ENST00000351817 SSBP3-AS1Q7Z2R9 100 aa12.92□□□□□ -0.34
NKX2-4-201ENST00000351817 FRAS1Q86XX4 4008 aa12.9□□□□□ -0.34
NKX2-4-201ENST00000351817 ALMS1Q8TCU4 4167 aa12.9□□□□□ -0.34
NKX2-4-201ENST00000351817 Q5VV11 94 aa12.88□□□□□ -0.35
NKX2-4-201ENST00000351817 DNAH11Q96DT5 4516 aa12.87□□□□□ -0.35
NKX2-4-201ENST00000351817 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
NKX2-4-201ENST00000351817 HYDINQ4G0P3 5121 aa12.86□□□□□ -0.35
NKX2-4-201ENST00000351817 DNAH5Q8TE73 4624 aa12.86□□□□□ -0.35
NKX2-4-201ENST00000351817 LOC101927531A0A1B0GV80 90 aa12.84□□□□□ -0.35
NKX2-4-201ENST00000351817 C8orf87E5RJ46 101 aa12.83□□□□□ -0.36
NKX2-4-201ENST00000351817 PRR15LQ9BU68 103 aa12.81□□□□□ -0.36
NKX2-4-201ENST00000351817 KRTAP13-3Q3SY46 172 aa12.8□□□□□ -0.36
NKX2-4-201ENST00000351817 Q5W150 140 aa12.8□□□□□ -0.36
NKX2-4-201ENST00000351817 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
NKX2-4-201ENST00000351817 CHKB-CPT1BH3BT56 60 aa12.76□□□□□ -0.37
NKX2-4-201ENST00000351817 PKD1P98161 4303 aa12.75□□□□□ -0.37
NKX2-4-201ENST00000351817 HRES1P13985 223 aa12.75□□□□□ -0.37
NKX2-4-201ENST00000351817 Q6ZSA8 131 aa12.73□□□□□ -0.37
NKX2-4-201ENST00000351817 Q75L30 129 aa12.72□□□□□ -0.37
NKX2-4-201ENST00000351817 KRTAP13-2Q52LG2 175 aa12.72□□□□□ -0.37
NKX2-4-201ENST00000351817 LINC00313P59037 77 aa12.7□□□□□ -0.38
NKX2-4-201ENST00000351817 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
NKX2-4-201ENST00000351817 LINC01558Q9Y6Z2 57 aa12.69□□□□□ -0.38
NKX2-4-201ENST00000351817 SPAG11AQ6PDA7 123 aa12.67□□□□□ -0.38
NKX2-4-201ENST00000351817 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
NKX2-4-201ENST00000351817 KTN1-AS1Q86SY8 53 aa12.62□□□□□ -0.39
NKX2-4-201ENST00000351817 A8MU10 97 aa12.62□□□□□ -0.39
NKX2-4-201ENST00000351817 A6NED7 52 aa12.6□□□□□ -0.39
NKX2-4-201ENST00000351817 LRP1BQ9NZR2 4599 aa12.59□□□□□ -0.39
NKX2-4-201ENST00000351817 SACSQ9NZJ4 4579 aa12.58□□□□□ -0.4
NKX2-4-201ENST00000351817 KRTAP1-4P0C5Y4 121 aa12.58□□□□□ -0.4
NKX2-4-201ENST00000351817 ACYP2P14621 99 aa12.58□□□□□ -0.4
NKX2-4-201ENST00000351817 KRTAP16-1A8MUX0 517 aa12.53□□□□□ -0.4
NKX2-4-201ENST00000351817 LCA10Q71F78 164 aa12.53□□□□□ -0.4
NKX2-4-201ENST00000351817 IGKV2-30P06310 120 aa12.52□□□□□ -0.41
NKX2-4-201ENST00000351817 ATP11AUNQ6ZP68 121 aa12.52□□□□□ -0.41
NKX2-4-201ENST00000351817 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
NKX2-4-201ENST00000351817 DMAC1Q96GE9 116 aa12.52□□□□□ -0.41
NKX2-4-201ENST00000351817 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.41
NKX2-4-201ENST00000351817 CDC42SE1Q9NRR8 79 aa12.48□□□□□ -0.41
NKX2-4-201ENST00000351817 RBM12B-AS1Q9P1G2 102 aa12.47□□□□□ -0.41
NKX2-4-201ENST00000351817 C4orf48Q5BLP8 95 aa12.47□□□□□ -0.41
NKX2-4-201ENST00000351817 PLA2G1BP04054 148 aaKnown RBP12.45□□□□□ -0.42
NKX2-4-201ENST00000351817 TYMSOSQ8TAI1 123 aa12.43□□□□□ -0.42
NKX2-4-201ENST00000351817 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
NKX2-4-201ENST00000351817 SPTSSBQ8NFR3 76 aa12.42□□□□□ -0.42
NKX2-4-201ENST00000351817 VPS13BQ7Z7G8 4022 aa12.42□□□□□ -0.42
NKX2-4-201ENST00000351817 SPINK1P00995 79 aa12.41□□□□□ -0.42
NKX2-4-201ENST00000351817 SPINK7P58062 85 aa12.39□□□□□ -0.43
NKX2-4-201ENST00000351817 A6NN06 94 aa12.35□□□□□ -0.43
NKX2-4-201ENST00000351817 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
NKX2-4-201ENST00000351817 A0A1B0GVY2 172 aa12.3□□□□□ -0.44
NKX2-4-201ENST00000351817 DYNC1H1Q14204 4646 aaKnown RBP12.29□□□□□ -0.44
NKX2-4-201ENST00000351817 C7orf65Q6ZTY9 151 aa12.29□□□□□ -0.44
NKX2-4-201ENST00000351817 RPS29P62273 56 aaKnown RBP12.27□□□□□ -0.45
NKX2-4-201ENST00000351817 LINC00304Q8N9R0 145 aa12.26□□□□□ -0.45
NKX2-4-201ENST00000351817 RYR2Q92736 4967 aa12.25□□□□□ -0.45
NKX2-4-201ENST00000351817 A0A1B0GU69 56 aa12.22□□□□□ -0.45
NKX2-4-201ENST00000351817 SMR3BP02814 79 aaPredicted RBP12.17□□□□□ -0.46
NKX2-4-201ENST00000351817 KMT2CQ8NEZ4 4911 aaKnown RBP12.17□□□□□ -0.46
NKX2-4-201ENST00000351817 APOBP04114 4563 aaKnown RBP12.16□□□□□ -0.46
NKX2-4-201ENST00000351817 FAT1Q14517 4588 aa12.08□□□□□ -0.48
NKX2-4-201ENST00000351817 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
NKX2-4-201ENST00000351817 SPATA8Q6RVD6 105 aa12.04□□□□□ -0.48
NKX2-4-201ENST00000351817 Q8N1X5 172 aa12.02□□□□□ -0.49
NKX2-4-201ENST00000351817 UQCR11O14957 56 aa12.01□□□□□ -0.49
NKX2-4-201ENST00000351817 A8MUU9 505 aa11.99□□□□□ -0.49
NKX2-4-201ENST00000351817 C20orf166-AS1Q96NR2 134 aa11.99□□□□□ -0.49
NKX2-4-201ENST00000351817 C9orf92A6NGG3 77 aa11.98□□□□□ -0.49
NKX2-4-201ENST00000351817 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
NKX2-4-201ENST00000351817 PKHD1L1Q86WI1 4243 aa11.9□□□□□ -0.5
NKX2-4-201ENST00000351817 RYR3Q15413 4870 aa11.84□□□□□ -0.51
NKX2-4-201ENST00000351817 LINC01554Q52M75 96 aa11.78□□□□□ -0.52
NKX2-4-201ENST00000351817 KRTAP3-1Q9BYR8 98 aa11.78□□□□□ -0.52
NKX2-4-201ENST00000351817 HSPG2P98160 4391 aa11.75□□□□□ -0.53
NKX2-4-201ENST00000351817 Q5VSD8 79 aa11.67□□□□□ -0.54
NKX2-4-201ENST00000351817 H3BS24 57 aa11.66□□□□□ -0.54
NKX2-4-201ENST00000351817 FLG2Q5D862 2391 aaPredicted RBP11.65□□□□□ -0.54
NKX2-4-201ENST00000351817 PRAC1Q96KF2 57 aa11.64□□□□□ -0.55
NKX2-4-201ENST00000351817 RYR1P21817 5038 aa11.63□□□□□ -0.55
NKX2-4-201ENST00000351817 LRP1Q07954 4544 aaKnown RBP11.63□□□□□ -0.55
NKX2-4-201ENST00000351817 COX6B2Q6YFQ2 88 aa11.63□□□□□ -0.55
NKX2-4-201ENST00000351817 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
NKX2-4-201ENST00000351817 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
NKX2-4-201ENST00000351817 TNXBP22105 4242 aa11.61□□□□□ -0.55
NKX2-4-201ENST00000351817 KRTAP10-8P60410 259 aa11.58□□□□□ -0.56
NKX2-4-201ENST00000351817 H0YAA0 97 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms