RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 MRPL34Q9BQ48 92 aaKnown RBP13.31□□□□□ -0.28
CNTFR-201ENST00000351266 LRP1BQ9NZR2 4599 aa13.3□□□□□ -0.28
CNTFR-201ENST00000351266 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
CNTFR-201ENST00000351266 SACSQ9NZJ4 4579 aa13.28□□□□□ -0.28
CNTFR-201ENST00000351266 LIMD2Q9BT23 127 aa13.27□□□□□ -0.28
CNTFR-201ENST00000351266 C8orf87E5RJ46 101 aa13.27□□□□□ -0.29
CNTFR-201ENST00000351266 PLA2G1BP04054 148 aaKnown RBP13.26□□□□□ -0.29
CNTFR-201ENST00000351266 C1orf64Q8NEQ6 169 aa13.25□□□□□ -0.29
CNTFR-201ENST00000351266 NDUFS5O43920 106 aa13.23□□□□□ -0.29
CNTFR-201ENST00000351266 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.3
CNTFR-201ENST00000351266 NOTCH2NLQ7Z3S9 236 aa13.2□□□□□ -0.3
CNTFR-201ENST00000351266 TYMSOSQ8TAI1 123 aa13.2□□□□□ -0.3
CNTFR-201ENST00000351266 SMIM26A0A096LP01 95 aa13.19□□□□□ -0.3
CNTFR-201ENST00000351266 C1orf195Q5TG92 126 aa13.18□□□□□ -0.3
CNTFR-201ENST00000351266 CYP4F30PQ9H0H9 118 aa13.18□□□□□ -0.3
CNTFR-201ENST00000351266 SPANXA2-OT1Q8N9U9 137 aa13.17□□□□□ -0.3
CNTFR-201ENST00000351266 SPINK1P00995 79 aa13.15□□□□□ -0.3
CNTFR-201ENST00000351266 VPS13BQ7Z7G8 4022 aa13.12□□□□□ -0.31
CNTFR-201ENST00000351266 LINC00313P59037 77 aa13.12□□□□□ -0.31
CNTFR-201ENST00000351266 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
CNTFR-201ENST00000351266 RPS29P62273 56 aaKnown RBP13.08□□□□□ -0.32
CNTFR-201ENST00000351266 SPAG11AQ6PDA7 123 aa13.07□□□□□ -0.32
CNTFR-201ENST00000351266 PKHD1P08F94 4074 aa13.04□□□□□ -0.32
CNTFR-201ENST00000351266 LINC00304Q8N9R0 145 aa13.03□□□□□ -0.32
CNTFR-201ENST00000351266 PRR4Q16378 134 aa13.03□□□□□ -0.32
CNTFR-201ENST00000351266 PRR26Q8N8Z3 221 aa13.03□□□□□ -0.32
CNTFR-201ENST00000351266 DYNC1H1Q14204 4646 aaKnown RBP13.02□□□□□ -0.32
CNTFR-201ENST00000351266 LOC101927531A0A1B0GV80 90 aa13.02□□□□□ -0.32
CNTFR-201ENST00000351266 FP248Q71RG6 208 aaPredicted RBP13.01□□□□□ -0.33
CNTFR-201ENST00000351266 Q8N9P0 234 aaPredicted RBP13.01□□□□□ -0.33
CNTFR-201ENST00000351266 IGLV7-46A0A075B6I9 117 aa13□□□□□ -0.33
CNTFR-201ENST00000351266 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
CNTFR-201ENST00000351266 KRTAP13-3Q3SY46 172 aa12.97□□□□□ -0.33
CNTFR-201ENST00000351266 FAM229AH3BQW9 127 aa12.96□□□□□ -0.33
CNTFR-201ENST00000351266 RYR2Q92736 4967 aa12.96□□□□□ -0.34
CNTFR-201ENST00000351266 PCOTHQ58A44 107 aa12.96□□□□□ -0.34
CNTFR-201ENST00000351266 C4orf26Q17RF5 130 aa12.95□□□□□ -0.34
CNTFR-201ENST00000351266 Q5W150 140 aa12.94□□□□□ -0.34
CNTFR-201ENST00000351266 KRTAP16-1A8MUX0 517 aa12.92□□□□□ -0.34
CNTFR-201ENST00000351266 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
CNTFR-201ENST00000351266 MPLKIPQ8TAP9 179 aa12.83□□□□□ -0.36
CNTFR-201ENST00000351266 Q1T7F1 81 aa12.8□□□□□ -0.36
CNTFR-201ENST00000351266 COA5Q86WW8 74 aa12.77□□□□□ -0.37
CNTFR-201ENST00000351266 V9GYY9 64 aa12.76□□□□□ -0.37
CNTFR-201ENST00000351266 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
CNTFR-201ENST00000351266 IGKV2-30P06310 120 aa12.75□□□□□ -0.37
CNTFR-201ENST00000351266 RETNLBQ9BQ08 111 aa12.72□□□□□ -0.37
CNTFR-201ENST00000351266 FAT1Q14517 4588 aa12.71□□□□□ -0.37
CNTFR-201ENST00000351266 HRES1P13985 223 aa12.66□□□□□ -0.38
CNTFR-201ENST00000351266 Q5VSD8 79 aa12.64□□□□□ -0.39
CNTFR-201ENST00000351266 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
CNTFR-201ENST00000351266 ACYP2P14621 99 aa12.62□□□□□ -0.39
CNTFR-201ENST00000351266 SVIPQ8NHG7 77 aa12.62□□□□□ -0.39
CNTFR-201ENST00000351266 DMAC1Q96GE9 116 aa12.59□□□□□ -0.39
CNTFR-201ENST00000351266 IGKV2D-30A0A075B6S6 120 aa12.58□□□□□ -0.4
CNTFR-201ENST00000351266 C20orf166-AS1Q96NR2 134 aa12.56□□□□□ -0.4
CNTFR-201ENST00000351266 A8MUU9 505 aa12.54□□□□□ -0.4
CNTFR-201ENST00000351266 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
CNTFR-201ENST00000351266 C9orf92A6NGG3 77 aa12.52□□□□□ -0.4
CNTFR-201ENST00000351266 C7orf65Q6ZTY9 151 aa12.52□□□□□ -0.4
CNTFR-201ENST00000351266 PSPHP1O15172 72 aa12.5□□□□□ -0.41
CNTFR-201ENST00000351266 Q8N1X5 172 aa12.5□□□□□ -0.41
CNTFR-201ENST00000351266 A8MUN3 132 aa12.46□□□□□ -0.42
CNTFR-201ENST00000351266 RYR3Q15413 4870 aa12.45□□□□□ -0.42
CNTFR-201ENST00000351266 CHKB-CPT1BH3BT56 60 aa12.44□□□□□ -0.42
CNTFR-201ENST00000351266 LINC01558Q9Y6Z2 57 aa12.43□□□□□ -0.42
CNTFR-201ENST00000351266 PRO0628Q9UI54 55 aa12.43□□□□□ -0.42
CNTFR-201ENST00000351266 PRR15LQ9BU68 103 aa12.42□□□□□ -0.42
CNTFR-201ENST00000351266 HSPG2P98160 4391 aa12.42□□□□□ -0.42
CNTFR-201ENST00000351266 BRK1Q8WUW1 75 aa12.41□□□□□ -0.42
CNTFR-201ENST00000351266 Q5VV11 94 aa12.4□□□□□ -0.42
CNTFR-201ENST00000351266 Q75L30 129 aa12.38□□□□□ -0.43
CNTFR-201ENST00000351266 FLG2Q5D862 2391 aaPredicted RBP12.37□□□□□ -0.43
CNTFR-201ENST00000351266 RYR1P21817 5038 aa12.35□□□□□ -0.43
CNTFR-201ENST00000351266 TNXBP22105 4242 aa12.29□□□□□ -0.44
CNTFR-201ENST00000351266 KRTAP17-1Q9BYP8 105 aa12.25□□□□□ -0.45
CNTFR-201ENST00000351266 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
CNTFR-201ENST00000351266 SPINK7P58062 85 aa12.22□□□□□ -0.45
CNTFR-201ENST00000351266 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
CNTFR-201ENST00000351266 MT1HL1P0DM35 61 aa12.19□□□□□ -0.46
CNTFR-201ENST00000351266 ATP11AUNQ6ZP68 121 aa12.19□□□□□ -0.46
CNTFR-201ENST00000351266 A6NED7 52 aa12.15□□□□□ -0.46
CNTFR-201ENST00000351266 RPL37P61927 97 aaKnown RBP12.13□□□□□ -0.47
CNTFR-201ENST00000351266 SPTSSBQ8NFR3 76 aa12.1□□□□□ -0.47
CNTFR-201ENST00000351266 A0A1B0GU69 56 aa12.09□□□□□ -0.47
CNTFR-201ENST00000351266 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
CNTFR-201ENST00000351266 XP32Q5T750 250 aa12.09□□□□□ -0.47
CNTFR-201ENST00000351266 COX6B2Q6YFQ2 88 aa12.02□□□□□ -0.49
CNTFR-201ENST00000351266 CDC42SE1Q9NRR8 79 aa12.02□□□□□ -0.49
CNTFR-201ENST00000351266 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
CNTFR-201ENST00000351266 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
CNTFR-201ENST00000351266 KRTAP3-1Q9BYR8 98 aa12□□□□□ -0.49
CNTFR-201ENST00000351266 LCA10Q71F78 164 aa11.98□□□□□ -0.49
CNTFR-201ENST00000351266 TPRXLQ17RH7 258 aa11.92□□□□□ -0.5
CNTFR-201ENST00000351266 A8MU10 97 aa11.91□□□□□ -0.5
CNTFR-201ENST00000351266 SEC61GP60059 68 aa11.91□□□□□ -0.5
CNTFR-201ENST00000351266 MYCBP2O75592 4640 aa11.88□□□□□ -0.51
CNTFR-201ENST00000351266 UQCR11O14957 56 aa11.84□□□□□ -0.51
CNTFR-201ENST00000351266 KRTAP4-5Q9BYR2 181 aa11.82□□□□□ -0.52
CNTFR-201ENST00000351266 PMAIP1Q13794 54 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms