RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
TNFSF13-202ENST00000349228 IGLV7-46A0A075B6I9 117 aa9.18□□□□□ -0.94
TNFSF13-202ENST00000349228 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
TNFSF13-202ENST00000349228 A6NN06 94 aa9.17□□□□□ -0.94
TNFSF13-202ENST00000349228 LY6G6CO95867 125 aa9.17□□□□□ -0.94
TNFSF13-202ENST00000349228 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
TNFSF13-202ENST00000349228 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
TNFSF13-202ENST00000349228 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
TNFSF13-202ENST00000349228 STARD9Q9P2P6 4700 aa9.12□□□□□ -0.95
TNFSF13-202ENST00000349228 KRTAP21-3Q3LHN1 58 aa9.12□□□□□ -0.95
TNFSF13-202ENST00000349228 DNHD1Q96M86 4753 aa9.11□□□□□ -0.95
TNFSF13-202ENST00000349228 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
TNFSF13-202ENST00000349228 PRKDCP78527 4128 aaKnown RBP9.1□□□□□ -0.95
TNFSF13-202ENST00000349228 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
TNFSF13-202ENST00000349228 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
TNFSF13-202ENST00000349228 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
TNFSF13-202ENST00000349228 A0A087X002 238 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 Q6ZSA8 131 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 PSPHP1O15172 72 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 COA5Q86WW8 74 aa9.05□□□□□ -0.96
TNFSF13-202ENST00000349228 Q8N9P0 234 aaPredicted RBP9.04□□□□□ -0.96
TNFSF13-202ENST00000349228 DNAH17Q9UFH2 4485 aa9.04□□□□□ -0.96
TNFSF13-202ENST00000349228 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
TNFSF13-202ENST00000349228 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
TNFSF13-202ENST00000349228 KRTAP10-1P60331 282 aa8.97□□□□□ -0.97
TNFSF13-202ENST00000349228 KMT2AQ03164 3969 aa8.96□□□□□ -0.97
TNFSF13-202ENST00000349228 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
TNFSF13-202ENST00000349228 Q5VV11 94 aa8.95□□□□□ -0.98
TNFSF13-202ENST00000349228 FBN3Q75N90 2809 aa8.95□□□□□ -0.98
TNFSF13-202ENST00000349228 DNAH2Q9P225 4427 aa8.95□□□□□ -0.98
TNFSF13-202ENST00000349228 Q5W150 140 aa8.94□□□□□ -0.98
TNFSF13-202ENST00000349228 DNAH8Q96JB1 4490 aa8.94□□□□□ -0.98
TNFSF13-202ENST00000349228 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
TNFSF13-202ENST00000349228 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
TNFSF13-202ENST00000349228 TGP01266 2768 aa8.92□□□□□ -0.98
TNFSF13-202ENST00000349228 HRES1P13985 223 aa8.91□□□□□ -0.98
TNFSF13-202ENST00000349228 PRR15LQ9BU68 103 aa8.91□□□□□ -0.98
TNFSF13-202ENST00000349228 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.98
TNFSF13-202ENST00000349228 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.99
TNFSF13-202ENST00000349228 A8MU10 97 aa8.88□□□□□ -0.99
TNFSF13-202ENST00000349228 CHKB-CPT1BH3BT56 60 aa8.88□□□□□ -0.99
TNFSF13-202ENST00000349228 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
TNFSF13-202ENST00000349228 ACYP2P14621 99 aa8.87□□□□□ -0.99
TNFSF13-202ENST00000349228 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
TNFSF13-202ENST00000349228 SPINK1P00995 79 aa8.83□□□□□ -1
TNFSF13-202ENST00000349228 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
TNFSF13-202ENST00000349228 IGKV2-30P06310 120 aa8.81□□□□□ -1
TNFSF13-202ENST00000349228 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
TNFSF13-202ENST00000349228 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
TNFSF13-202ENST00000349228 DMAC1Q96GE9 116 aa8.81□□□□□ -1
TNFSF13-202ENST00000349228 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
TNFSF13-202ENST00000349228 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
TNFSF13-202ENST00000349228 CDC42SE1Q9NRR8 79 aa8.78□□□□□ -1
TNFSF13-202ENST00000349228 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
TNFSF13-202ENST00000349228 A6NED7 52 aa8.76□□□□□ -1.01
TNFSF13-202ENST00000349228 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
TNFSF13-202ENST00000349228 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
TNFSF13-202ENST00000349228 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
TNFSF13-202ENST00000349228 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
TNFSF13-202ENST00000349228 PKD1P98161 4303 aa8.68□□□□□ -1.02
TNFSF13-202ENST00000349228 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
TNFSF13-202ENST00000349228 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
TNFSF13-202ENST00000349228 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
TNFSF13-202ENST00000349228 FAT2Q9NYQ8 4349 aa8.62□□□□□ -1.03
TNFSF13-202ENST00000349228 SPINK7P58062 85 aa8.6□□□□□ -1.03
TNFSF13-202ENST00000349228 A0A1B0GU69 56 aa8.56□□□□□ -1.04
TNFSF13-202ENST00000349228 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
TNFSF13-202ENST00000349228 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
TNFSF13-202ENST00000349228 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
TNFSF13-202ENST00000349228 A8MUU9 505 aa8.5□□□□□ -1.05
TNFSF13-202ENST00000349228 C20orf166-AS1Q96NR2 134 aa8.5□□□□□ -1.05
TNFSF13-202ENST00000349228 KRTAP10-4P60372 401 aaPredicted RBP8.49□□□□□ -1.05
TNFSF13-202ENST00000349228 ROMO1P60602 79 aa8.49□□□□□ -1.05
TNFSF13-202ENST00000349228 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
TNFSF13-202ENST00000349228 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
TNFSF13-202ENST00000349228 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
TNFSF13-202ENST00000349228 UQCR11O14957 56 aa8.43□□□□□ -1.06
TNFSF13-202ENST00000349228 SACSQ9NZJ4 4579 aa8.41□□□□□ -1.06
TNFSF13-202ENST00000349228 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
TNFSF13-202ENST00000349228 Q8N1X5 172 aa8.39□□□□□ -1.07
TNFSF13-202ENST00000349228 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
TNFSF13-202ENST00000349228 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
TNFSF13-202ENST00000349228 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
TNFSF13-202ENST00000349228 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
TNFSF13-202ENST00000349228 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
TNFSF13-202ENST00000349228 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
TNFSF13-202ENST00000349228 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
TNFSF13-202ENST00000349228 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
TNFSF13-202ENST00000349228 P0C880 135 aa8.22□□□□□ -1.09
TNFSF13-202ENST00000349228 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
TNFSF13-202ENST00000349228 LUZP6Q538Z0 58 aa8.17□□□□□ -1.1
TNFSF13-202ENST00000349228 KMT2CQ8NEZ4 4911 aaKnown RBP8.15□□□□□ -1.1
TNFSF13-202ENST00000349228 Q5VSD8 79 aa8.14□□□□□ -1.11
TNFSF13-202ENST00000349228 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
TNFSF13-202ENST00000349228 FAT1Q14517 4588 aa8.12□□□□□ -1.11
TNFSF13-202ENST00000349228 A0A1B0GU33 70 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms