RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 SACSQ9NZJ4 4579 aa12.78□□□□□ -0.36
PTPN18-202ENST00000347849 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
PTPN18-202ENST00000347849 IGLV9-49A0A0B4J1Y8 123 aa12.77□□□□□ -0.37
PTPN18-202ENST00000347849 PRR15LQ9BU68 103 aa12.77□□□□□ -0.37
PTPN18-202ENST00000347849 PCOTHQ58A44 107 aa12.76□□□□□ -0.37
PTPN18-202ENST00000347849 CIRBP-AS1Q8TBR5 109 aa12.76□□□□□ -0.37
PTPN18-202ENST00000347849 LRP1BQ9NZR2 4599 aa12.75□□□□□ -0.37
PTPN18-202ENST00000347849 IGLV7-46A0A075B6I9 117 aa12.74□□□□□ -0.37
PTPN18-202ENST00000347849 COA5Q86WW8 74 aa12.74□□□□□ -0.37
PTPN18-202ENST00000347849 KRTAP10-1P60331 282 aa12.73□□□□□ -0.37
PTPN18-202ENST00000347849 ZNF861PO60384 105 aa12.73□□□□□ -0.37
PTPN18-202ENST00000347849 Q96NJ1 140 aa12.72□□□□□ -0.37
PTPN18-202ENST00000347849 LINC00483Q53H64 154 aa12.69□□□□□ -0.38
PTPN18-202ENST00000347849 CD164Q04900 197 aa12.67□□□□□ -0.38
PTPN18-202ENST00000347849 TP53AIP1Q9HCN2 124 aa12.67□□□□□ -0.38
PTPN18-202ENST00000347849 NDUFS5O43920 106 aa12.66□□□□□ -0.38
PTPN18-202ENST00000347849 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
PTPN18-202ENST00000347849 C8orf17Q9NRJ1 99 aa12.66□□□□□ -0.38
PTPN18-202ENST00000347849 ASB16-AS1Q495Z4 193 aa12.66□□□□□ -0.38
PTPN18-202ENST00000347849 PKHD1P08F94 4074 aa12.65□□□□□ -0.38
PTPN18-202ENST00000347849 IGHV6-1A0A0B4J1U7 121 aa12.65□□□□□ -0.38
PTPN18-202ENST00000347849 MOBPQ13875 183 aa12.64□□□□□ -0.39
PTPN18-202ENST00000347849 Q6ZSA8 131 aa12.64□□□□□ -0.39
PTPN18-202ENST00000347849 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
PTPN18-202ENST00000347849 A6NED7 52 aa12.6□□□□□ -0.39
PTPN18-202ENST00000347849 LOC101927531A0A1B0GV80 90 aa12.6□□□□□ -0.39
PTPN18-202ENST00000347849 LCA10Q71F78 164 aa12.6□□□□□ -0.39
PTPN18-202ENST00000347849 Q75L30 129 aa12.6□□□□□ -0.39
PTPN18-202ENST00000347849 SPTSSBQ8NFR3 76 aa12.6□□□□□ -0.39
PTPN18-202ENST00000347849 SPAG11AQ6PDA7 123 aa12.59□□□□□ -0.39
PTPN18-202ENST00000347849 A0A1B0GVX0 72 aa12.58□□□□□ -0.4
PTPN18-202ENST00000347849 CDK2AP2O75956 126 aa12.56□□□□□ -0.4
PTPN18-202ENST00000347849 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
PTPN18-202ENST00000347849 A0A087X002 238 aa12.54□□□□□ -0.4
PTPN18-202ENST00000347849 NOTCH2NLQ7Z3S9 236 aa12.54□□□□□ -0.4
PTPN18-202ENST00000347849 MRPL34Q9BQ48 92 aaKnown RBP12.53□□□□□ -0.4
PTPN18-202ENST00000347849 HRES1P13985 223 aa12.5□□□□□ -0.41
PTPN18-202ENST00000347849 LINC01558Q9Y6Z2 57 aa12.49□□□□□ -0.41
PTPN18-202ENST00000347849 KMT2CQ8NEZ4 4911 aaKnown RBP12.49□□□□□ -0.41
PTPN18-202ENST00000347849 ATP11AUNQ6ZP68 121 aa12.48□□□□□ -0.41
PTPN18-202ENST00000347849 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
PTPN18-202ENST00000347849 RYR2Q92736 4967 aa12.45□□□□□ -0.42
PTPN18-202ENST00000347849 SPINK6Q6UWN8 80 aa12.44□□□□□ -0.42
PTPN18-202ENST00000347849 CDC42SE1Q9NRR8 79 aa12.43□□□□□ -0.42
PTPN18-202ENST00000347849 Q5W150 140 aa12.39□□□□□ -0.43
PTPN18-202ENST00000347849 KTN1-AS1Q86SY8 53 aa12.39□□□□□ -0.43
PTPN18-202ENST00000347849 SPINK7P58062 85 aa12.37□□□□□ -0.43
PTPN18-202ENST00000347849 KRTAP13-2Q52LG2 175 aa12.37□□□□□ -0.43
PTPN18-202ENST00000347849 RBM12B-AS1Q9P1G2 102 aa12.36□□□□□ -0.43
PTPN18-202ENST00000347849 PRR26Q8N8Z3 221 aa12.35□□□□□ -0.43
PTPN18-202ENST00000347849 A6NN06 94 aa12.34□□□□□ -0.43
PTPN18-202ENST00000347849 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
PTPN18-202ENST00000347849 KRTAP1-4P0C5Y4 121 aa12.33□□□□□ -0.44
PTPN18-202ENST00000347849 FAT1Q14517 4588 aa12.3□□□□□ -0.44
PTPN18-202ENST00000347849 SMR3BP02814 79 aaPredicted RBP12.29□□□□□ -0.44
PTPN18-202ENST00000347849 SSBP3-AS1Q7Z2R9 100 aa12.29□□□□□ -0.44
PTPN18-202ENST00000347849 APOBP04114 4563 aaKnown RBP12.29□□□□□ -0.44
PTPN18-202ENST00000347849 KRTAP13-3Q3SY46 172 aa12.29□□□□□ -0.44
PTPN18-202ENST00000347849 ACYP2P14621 99 aa12.22□□□□□ -0.45
PTPN18-202ENST00000347849 PLA2G1BP04054 148 aaKnown RBP12.19□□□□□ -0.46
PTPN18-202ENST00000347849 RETNLBQ9BQ08 111 aa12.18□□□□□ -0.46
PTPN18-202ENST00000347849 RYR3Q15413 4870 aa12.15□□□□□ -0.46
PTPN18-202ENST00000347849 C8orf87E5RJ46 101 aa12.14□□□□□ -0.47
PTPN18-202ENST00000347849 C7orf65Q6ZTY9 151 aa12.14□□□□□ -0.47
PTPN18-202ENST00000347849 LINC00313P59037 77 aa12.13□□□□□ -0.47
PTPN18-202ENST00000347849 DMAC1Q96GE9 116 aa12.11□□□□□ -0.47
PTPN18-202ENST00000347849 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
PTPN18-202ENST00000347849 TYMSOSQ8TAI1 123 aa12.09□□□□□ -0.47
PTPN18-202ENST00000347849 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
PTPN18-202ENST00000347849 A0A1B0GU69 56 aa12.02□□□□□ -0.48
PTPN18-202ENST00000347849 IGKV2-30P06310 120 aa12.01□□□□□ -0.49
PTPN18-202ENST00000347849 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
PTPN18-202ENST00000347849 SPINK1P00995 79 aa11.93□□□□□ -0.5
PTPN18-202ENST00000347849 PKHD1L1Q86WI1 4243 aa11.92□□□□□ -0.5
PTPN18-202ENST00000347849 LINC00304Q8N9R0 145 aa11.92□□□□□ -0.5
PTPN18-202ENST00000347849 HSPG2P98160 4391 aa11.91□□□□□ -0.5
PTPN18-202ENST00000347849 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
PTPN18-202ENST00000347849 KRTAP16-1A8MUX0 517 aa11.91□□□□□ -0.5
PTPN18-202ENST00000347849 PRAC1Q96KF2 57 aa11.88□□□□□ -0.51
PTPN18-202ENST00000347849 SPATA8Q6RVD6 105 aa11.88□□□□□ -0.51
PTPN18-202ENST00000347849 ADM2Q7Z4H4 148 aa11.85□□□□□ -0.51
PTPN18-202ENST00000347849 LRP1Q07954 4544 aaKnown RBP11.84□□□□□ -0.51
PTPN18-202ENST00000347849 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
PTPN18-202ENST00000347849 UQCR11O14957 56 aa11.82□□□□□ -0.52
PTPN18-202ENST00000347849 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
PTPN18-202ENST00000347849 RYR1P21817 5038 aa11.8□□□□□ -0.52
PTPN18-202ENST00000347849 KIAA1109Q2LD37 5005 aa11.76□□□□□ -0.53
PTPN18-202ENST00000347849 RPS29P62273 56 aaKnown RBP11.75□□□□□ -0.53
PTPN18-202ENST00000347849 Q5VSD8 79 aa11.72□□□□□ -0.53
PTPN18-202ENST00000347849 EPPK1P58107 5090 aaKnown RBP11.72□□□□□ -0.53
PTPN18-202ENST00000347849 TNXBP22105 4242 aa11.7□□□□□ -0.54
PTPN18-202ENST00000347849 Q8N1X5 172 aa11.66□□□□□ -0.54
PTPN18-202ENST00000347849 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
PTPN18-202ENST00000347849 C9orf92A6NGG3 77 aa11.63□□□□□ -0.55
PTPN18-202ENST00000347849 H3BS24 57 aa11.63□□□□□ -0.55
PTPN18-202ENST00000347849 MYCBP2O75592 4640 aa11.59□□□□□ -0.55
PTPN18-202ENST00000347849 FAT3Q8TDW7 4589 aa11.58□□□□□ -0.55
PTPN18-202ENST00000347849 LINC01554Q52M75 96 aa11.58□□□□□ -0.56
PTPN18-202ENST00000347849 KRTAP10-8P60410 259 aa11.57□□□□□ -0.56
PTPN18-202ENST00000347849 CSAG1Q6PB30 78 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms