RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 SPINK1P00995 79 aa12.94□□□□□ -0.34
TNFRSF10B-202ENST00000347739 C1orf195Q5TG92 126 aa12.92□□□□□ -0.34
TNFRSF10B-202ENST00000347739 SNURFQ9Y675 71 aa12.91□□□□□ -0.34
TNFRSF10B-202ENST00000347739 A0A0U1RQV1 116 aa12.91□□□□□ -0.34
TNFRSF10B-202ENST00000347739 FAM229AH3BQW9 127 aa12.91□□□□□ -0.34
TNFRSF10B-202ENST00000347739 C5orf47Q569G3 176 aa12.91□□□□□ -0.34
TNFRSF10B-202ENST00000347739 RPS29P62273 56 aaKnown RBP12.9□□□□□ -0.34
TNFRSF10B-202ENST00000347739 TMEM258P61165 79 aa12.89□□□□□ -0.35
TNFRSF10B-202ENST00000347739 SPAG11AQ6PDA7 123 aa12.88□□□□□ -0.35
TNFRSF10B-202ENST00000347739 LINC00304Q8N9R0 145 aa12.88□□□□□ -0.35
TNFRSF10B-202ENST00000347739 NDUFC1O43677 76 aa12.87□□□□□ -0.35
TNFRSF10B-202ENST00000347739 H7BZZ5 65 aa12.86□□□□□ -0.35
TNFRSF10B-202ENST00000347739 PKHD1L1Q86WI1 4243 aa12.85□□□□□ -0.35
TNFRSF10B-202ENST00000347739 C8orf87E5RJ46 101 aa12.85□□□□□ -0.35
TNFRSF10B-202ENST00000347739 NOTCH2NLQ7Z3S9 236 aa12.85□□□□□ -0.35
TNFRSF10B-202ENST00000347739 MRPL34Q9BQ48 92 aaKnown RBP12.82□□□□□ -0.36
TNFRSF10B-202ENST00000347739 TP53AIP1Q9HCN2 124 aa12.81□□□□□ -0.36
TNFRSF10B-202ENST00000347739 Q5VSD8 79 aa12.8□□□□□ -0.36
TNFRSF10B-202ENST00000347739 HSPG2P98160 4391 aa12.8□□□□□ -0.36
TNFRSF10B-202ENST00000347739 ZCCHC13Q8WW36 166 aaKnown RBP12.79□□□□□ -0.36
TNFRSF10B-202ENST00000347739 MP68P56378 58 aa12.78□□□□□ -0.36
TNFRSF10B-202ENST00000347739 H3BPC8 53 aa12.75□□□□□ -0.37
TNFRSF10B-202ENST00000347739 RYR1P21817 5038 aa12.75□□□□□ -0.37
TNFRSF10B-202ENST00000347739 H0Y9P7 68 aa12.74□□□□□ -0.37
TNFRSF10B-202ENST00000347739 LINC00313P59037 77 aa12.74□□□□□ -0.37
TNFRSF10B-202ENST00000347739 TRAV22A0A0B4J277 110 aa12.73□□□□□ -0.37
TNFRSF10B-202ENST00000347739 NDUFS5O43920 106 aa12.71□□□□□ -0.38
TNFRSF10B-202ENST00000347739 FAM236DA0A1B0GTK5 79 aa12.69□□□□□ -0.38
TNFRSF10B-202ENST00000347739 FAM236CP0DP71 79 aa12.69□□□□□ -0.38
TNFRSF10B-202ENST00000347739 LINC00208Q96KT6 92 aa12.68□□□□□ -0.38
TNFRSF10B-202ENST00000347739 ATP5EP56381 51 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF10B-202ENST00000347739 Q8N9P0 234 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF10B-202ENST00000347739 KRTAP16-1A8MUX0 517 aa12.63□□□□□ -0.39
TNFRSF10B-202ENST00000347739 C1orf64Q8NEQ6 169 aa12.62□□□□□ -0.39
TNFRSF10B-202ENST00000347739 KRTAP17-1Q9BYP8 105 aa12.61□□□□□ -0.39
TNFRSF10B-202ENST00000347739 KRTAP10-8P60410 259 aa12.6□□□□□ -0.39
TNFRSF10B-202ENST00000347739 Q8N1X5 172 aa12.59□□□□□ -0.39
TNFRSF10B-202ENST00000347739 RPS28P62857 69 aaKnown RBP12.58□□□□□ -0.4
TNFRSF10B-202ENST00000347739 KIAA1109Q2LD37 5005 aa12.56□□□□□ -0.4
TNFRSF10B-202ENST00000347739 KRTAP13-3Q3SY46 172 aa12.55□□□□□ -0.4
TNFRSF10B-202ENST00000347739 EPPK1P58107 5090 aaKnown RBP12.55□□□□□ -0.4
TNFRSF10B-202ENST00000347739 Q5W150 140 aa12.52□□□□□ -0.41
TNFRSF10B-202ENST00000347739 LRP1Q07954 4544 aaKnown RBP12.5□□□□□ -0.41
TNFRSF10B-202ENST00000347739 TNXBP22105 4242 aa12.5□□□□□ -0.41
TNFRSF10B-202ENST00000347739 SERP1Q9Y6X1 66 aa12.48□□□□□ -0.41
TNFRSF10B-202ENST00000347739 LOC101927531A0A1B0GV80 90 aa12.46□□□□□ -0.41
TNFRSF10B-202ENST00000347739 FAT3Q8TDW7 4589 aa12.46□□□□□ -0.42
TNFRSF10B-202ENST00000347739 FLG2Q5D862 2391 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF10B-202ENST00000347739 SPANXA2-OT1Q8N9U9 137 aa12.45□□□□□ -0.42
TNFRSF10B-202ENST00000347739 CYP4F30PQ9H0H9 118 aa12.42□□□□□ -0.42
TNFRSF10B-202ENST00000347739 RETNLBQ9BQ08 111 aa12.42□□□□□ -0.42
TNFRSF10B-202ENST00000347739 OXTP01178 125 aa12.4□□□□□ -0.43
TNFRSF10B-202ENST00000347739 PCOTHQ58A44 107 aa12.37□□□□□ -0.43
TNFRSF10B-202ENST00000347739 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
TNFRSF10B-202ENST00000347739 IGLV7-46A0A075B6I9 117 aa12.34□□□□□ -0.43
TNFRSF10B-202ENST00000347739 C9orf92A6NGG3 77 aa12.33□□□□□ -0.44
TNFRSF10B-202ENST00000347739 C20orf166-AS1Q96NR2 134 aa12.33□□□□□ -0.44
TNFRSF10B-202ENST00000347739 FP248Q71RG6 208 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF10B-202ENST00000347739 PRR4Q16378 134 aa12.31□□□□□ -0.44
TNFRSF10B-202ENST00000347739 A8MUU9 505 aa12.31□□□□□ -0.44
TNFRSF10B-202ENST00000347739 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
TNFRSF10B-202ENST00000347739 MYCBP2O75592 4640 aa12.27□□□□□ -0.45
TNFRSF10B-202ENST00000347739 KRTAP4-5Q9BYR2 181 aa12.2□□□□□ -0.46
TNFRSF10B-202ENST00000347739 SMIM26A0A096LP01 95 aa12.18□□□□□ -0.46
TNFRSF10B-202ENST00000347739 Q75L30 129 aa12.18□□□□□ -0.46
TNFRSF10B-202ENST00000347739 IGKV2D-30A0A075B6S6 120 aa12.15□□□□□ -0.46
TNFRSF10B-202ENST00000347739 HRES1P13985 223 aa12.15□□□□□ -0.46
TNFRSF10B-202ENST00000347739 DMBT1Q9UGM3 2413 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF10B-202ENST00000347739 C7orf65Q6ZTY9 151 aa12.12□□□□□ -0.47
TNFRSF10B-202ENST00000347739 COA5Q86WW8 74 aa12.06□□□□□ -0.48
TNFRSF10B-202ENST00000347739 DMAC1Q96GE9 116 aa12.04□□□□□ -0.48
TNFRSF10B-202ENST00000347739 XP32Q5T750 250 aa12.01□□□□□ -0.49
TNFRSF10B-202ENST00000347739 BIRC6Q9NR09 4857 aa12□□□□□ -0.49
TNFRSF10B-202ENST00000347739 ACYP2P14621 99 aa11.99□□□□□ -0.49
TNFRSF10B-202ENST00000347739 RPL37P61927 97 aaKnown RBP11.99□□□□□ -0.49
TNFRSF10B-202ENST00000347739 ATP11AUNQ6ZP68 121 aa11.95□□□□□ -0.5
TNFRSF10B-202ENST00000347739 HERC2O95714 4834 aa11.95□□□□□ -0.5
TNFRSF10B-202ENST00000347739 TPRXLQ17RH7 258 aa11.93□□□□□ -0.5
TNFRSF10B-202ENST00000347739 SPINK7P58062 85 aa11.92□□□□□ -0.5
TNFRSF10B-202ENST00000347739 ABCA13Q86UQ4 5058 aa11.92□□□□□ -0.5
TNFRSF10B-202ENST00000347739 Q1T7F1 81 aa11.91□□□□□ -0.5
TNFRSF10B-202ENST00000347739 MPLKIPQ8TAP9 179 aa11.9□□□□□ -0.5
TNFRSF10B-202ENST00000347739 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
TNFRSF10B-202ENST00000347739 A8MUN3 132 aa11.85□□□□□ -0.51
TNFRSF10B-202ENST00000347739 V9GYY9 64 aa11.84□□□□□ -0.51
TNFRSF10B-202ENST00000347739 J3QL48 77 aa11.83□□□□□ -0.52
TNFRSF10B-202ENST00000347739 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
TNFRSF10B-202ENST00000347739 KRTAP3-1Q9BYR8 98 aa11.69□□□□□ -0.54
TNFRSF10B-202ENST00000347739 COX6B2Q6YFQ2 88 aa11.68□□□□□ -0.54
TNFRSF10B-202ENST00000347739 LINC01558Q9Y6Z2 57 aa11.68□□□□□ -0.54
TNFRSF10B-202ENST00000347739 PSPHP1O15172 72 aa11.63□□□□□ -0.55
TNFRSF10B-202ENST00000347739 LRP2P98164 4655 aa11.61□□□□□ -0.55
TNFRSF10B-202ENST00000347739 LPAP08519 4548 aa11.6□□□□□ -0.55
TNFRSF10B-202ENST00000347739 PRR15LQ9BU68 103 aa11.58□□□□□ -0.56
TNFRSF10B-202ENST00000347739 Q5VV11 94 aa11.57□□□□□ -0.56
TNFRSF10B-202ENST00000347739 SPTSSBQ8NFR3 76 aa11.52□□□□□ -0.57
TNFRSF10B-202ENST00000347739 SEC61BP60468 96 aaKnown RBP11.49□□□□□ -0.57
TNFRSF10B-202ENST00000347739 PCLOQ9Y6V0 5065 aa11.41□□□□□ -0.58
TNFRSF10B-202ENST00000347739 A0A1B0GU69 56 aa11.39□□□□□ -0.59
TNFRSF10B-202ENST00000347739 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms