RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.4
SMG7-201ENST00000347615 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
SMG7-201ENST00000347615 KRTAP10-2P60368 255 aa6.25□□□□□ -1.41
SMG7-201ENST00000347615 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
SMG7-201ENST00000347615 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
SMG7-201ENST00000347615 SPRR1BP22528 89 aa6.22□□□□□ -1.41
SMG7-201ENST00000347615 A0A1B0GU33 70 aa6.21□□□□□ -1.41
SMG7-201ENST00000347615 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
SMG7-201ENST00000347615 NIPBLQ6KC79 2804 aaeCLIP6.21□□□□□ -1.42
SMG7-201ENST00000347615 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
SMG7-201ENST00000347615 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
SMG7-201ENST00000347615 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
SMG7-201ENST00000347615 KMT2BQ9UMN6 2715 aaPredicted RBP6.18□□□□□ -1.42
SMG7-201ENST00000347615 J3QL48 77 aa6.17□□□□□ -1.42
SMG7-201ENST00000347615 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
SMG7-201ENST00000347615 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
SMG7-201ENST00000347615 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
SMG7-201ENST00000347615 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
SMG7-201ENST00000347615 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
SMG7-201ENST00000347615 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
SMG7-201ENST00000347615 LINC00483Q53H64 154 aa6.1□□□□□ -1.43
SMG7-201ENST00000347615 Q6ZR54 194 aa6.1□□□□□ -1.43
SMG7-201ENST00000347615 H3BS24 57 aa6.1□□□□□ -1.43
SMG7-201ENST00000347615 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
SMG7-201ENST00000347615 FLG2Q5D862 2391 aaPredicted RBP6.05□□□□□ -1.44
SMG7-201ENST00000347615 Q6ZSA8 131 aa6.05□□□□□ -1.44
SMG7-201ENST00000347615 S4R3F8 94 aa6.03□□□□□ -1.44
SMG7-201ENST00000347615 Q6ZRN7 208 aaPredicted RBP6.02□□□□□ -1.45
SMG7-201ENST00000347615 LCE6AA0A183 80 aa6.01□□□□□ -1.45
SMG7-201ENST00000347615 TENM4Q6N022 2769 aa6.01□□□□□ -1.45
SMG7-201ENST00000347615 TENM3Q9P273 2699 aa5.99□□□□□ -1.45
SMG7-201ENST00000347615 A6NN06 94 aa5.98□□□□□ -1.45
SMG7-201ENST00000347615 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
SMG7-201ENST00000347615 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
SMG7-201ENST00000347615 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.45
SMG7-201ENST00000347615 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
SMG7-201ENST00000347615 TENM1Q9UKZ4 2725 aa5.95□□□□□ -1.46
SMG7-201ENST00000347615 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
SMG7-201ENST00000347615 Q5VSD8 79 aa5.94□□□□□ -1.46
SMG7-201ENST00000347615 PDZD2O15018 2839 aa5.94□□□□□ -1.46
SMG7-201ENST00000347615 VWFP04275 2813 aa5.93□□□□□ -1.46
SMG7-201ENST00000347615 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
SMG7-201ENST00000347615 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.47
SMG7-201ENST00000347615 ROMO1P60602 79 aa5.89□□□□□ -1.47
SMG7-201ENST00000347615 PKD1L1Q8TDX9 2849 aa5.88□□□□□ -1.47
SMG7-201ENST00000347615 R4GN34 69 aa5.88□□□□□ -1.47
SMG7-201ENST00000347615 M0QZ58 72 aa5.84□□□□□ -1.47
SMG7-201ENST00000347615 M0R2T5 61 aa5.84□□□□□ -1.47
SMG7-201ENST00000347615 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
SMG7-201ENST00000347615 CSMD3Q7Z407 3707 aa5.81□□□□□ -1.48
SMG7-201ENST00000347615 TGP01266 2768 aa5.79□□□□□ -1.48
SMG7-201ENST00000347615 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
SMG7-201ENST00000347615 OTOGQ6ZRI0 2925 aa5.77□□□□□ -1.49
SMG7-201ENST00000347615 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
SMG7-201ENST00000347615 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
SMG7-201ENST00000347615 ANK3Q12955 4377 aaKnown RBP5.76□□□□□ -1.49
SMG7-201ENST00000347615 ZNF469Q96JG9 3925 aaPredicted RBP5.73□□□□□ -1.49
SMG7-201ENST00000347615 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
SMG7-201ENST00000347615 KRTAP1-4P0C5Y4 121 aa5.67□□□□□ -1.5
SMG7-201ENST00000347615 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
SMG7-201ENST00000347615 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
SMG7-201ENST00000347615 A8MUU9 505 aa5.65□□□□□ -1.5
SMG7-201ENST00000347615 H0YAA0 97 aa5.64□□□□□ -1.51
SMG7-201ENST00000347615 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
SMG7-201ENST00000347615 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.52
SMG7-201ENST00000347615 AKAP9Q99996 3911 aa5.58□□□□□ -1.52
SMG7-201ENST00000347615 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
SMG7-201ENST00000347615 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
SMG7-201ENST00000347615 C20orf166-AS1Q96NR2 134 aa5.56□□□□□ -1.52
SMG7-201ENST00000347615 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
SMG7-201ENST00000347615 XP32Q5T750 250 aa5.49□□□□□ -1.53
SMG7-201ENST00000347615 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
SMG7-201ENST00000347615 P0C880 135 aa5.48□□□□□ -1.53
SMG7-201ENST00000347615 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
SMG7-201ENST00000347615 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
SMG7-201ENST00000347615 MEGF8Q7Z7M0 2845 aa5.45□□□□□ -1.54
SMG7-201ENST00000347615 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
SMG7-201ENST00000347615 HUWE1Q7Z6Z7 4374 aaKnown RBP5.4□□□□□ -1.55
SMG7-201ENST00000347615 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
SMG7-201ENST00000347615 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
SMG7-201ENST00000347615 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
SMG7-201ENST00000347615 TNP1P09430 55 aa5.28□□□□□ -1.56
SMG7-201ENST00000347615 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
SMG7-201ENST00000347615 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
SMG7-201ENST00000347615 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.57
SMG7-201ENST00000347615 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
SMG7-201ENST00000347615 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
SMG7-201ENST00000347615 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
SMG7-201ENST00000347615 DNAH9Q9NYC9 4486 aa5.08□□□□□ -1.6
SMG7-201ENST00000347615 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
SMG7-201ENST00000347615 DNAH1Q9P2D7 4330 aa5.06□□□□□ -1.6
SMG7-201ENST00000347615 KRTAP21-3Q3LHN1 58 aa5.06□□□□□ -1.6
SMG7-201ENST00000347615 LYSTQ99698 3801 aa5.05□□□□□ -1.6
SMG7-201ENST00000347615 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
SMG7-201ENST00000347615 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
SMG7-201ENST00000347615 ANK2Q01484 3957 aa5□□□□□ -1.61
SMG7-201ENST00000347615 DNAH11Q96DT5 4516 aa4.99□□□□□ -1.61
SMG7-201ENST00000347615 KRTAP3-3Q9BYR6 98 aa4.97□□□□□ -1.61
SMG7-201ENST00000347615 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
SMG7-201ENST00000347615 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms