RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 CD164Q04900 197 aa11.31□□□□□ -0.6
LYSMD4-202ENST00000344791 SPANXA2-OT1Q8N9U9 137 aa11.31□□□□□ -0.6
LYSMD4-202ENST00000344791 KRTAP10-2P60368 255 aa11.3□□□□□ -0.6
LYSMD4-202ENST00000344791 MRPL34Q9BQ48 92 aaKnown RBP11.3□□□□□ -0.6
LYSMD4-202ENST00000344791 DNAH11Q96DT5 4516 aa11.28□□□□□ -0.6
LYSMD4-202ENST00000344791 COA5Q86WW8 74 aa11.27□□□□□ -0.6
LYSMD4-202ENST00000344791 TP53AIP1Q9HCN2 124 aa11.27□□□□□ -0.6
LYSMD4-202ENST00000344791 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.61
LYSMD4-202ENST00000344791 ALMS1Q8TCU4 4167 aa11.25□□□□□ -0.61
LYSMD4-202ENST00000344791 A8MU10 97 aa11.24□□□□□ -0.61
LYSMD4-202ENST00000344791 IGLV7-46A0A075B6I9 117 aa11.23□□□□□ -0.61
LYSMD4-202ENST00000344791 RETNLBQ9BQ08 111 aa11.23□□□□□ -0.61
LYSMD4-202ENST00000344791 PRR15LQ9BU68 103 aa11.22□□□□□ -0.61
LYSMD4-202ENST00000344791 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
LYSMD4-202ENST00000344791 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.61
LYSMD4-202ENST00000344791 Q5W150 140 aa11.2□□□□□ -0.62
LYSMD4-202ENST00000344791 Q5VV11 94 aa11.18□□□□□ -0.62
LYSMD4-202ENST00000344791 CHKB-CPT1BH3BT56 60 aa11.18□□□□□ -0.62
LYSMD4-202ENST00000344791 HYDINQ4G0P3 5121 aa11.17□□□□□ -0.62
LYSMD4-202ENST00000344791 SPAG11AQ6PDA7 123 aa11.16□□□□□ -0.62
LYSMD4-202ENST00000344791 V9GYY9 64 aa11.15□□□□□ -0.62
LYSMD4-202ENST00000344791 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
LYSMD4-202ENST00000344791 C1orf195Q5TG92 126 aa11.12□□□□□ -0.63
LYSMD4-202ENST00000344791 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
LYSMD4-202ENST00000344791 LIMD2Q9BT23 127 aa11.09□□□□□ -0.63
LYSMD4-202ENST00000344791 HRES1P13985 223 aa11.09□□□□□ -0.63
LYSMD4-202ENST00000344791 KRTAP13-2Q52LG2 175 aa11.09□□□□□ -0.63
LYSMD4-202ENST00000344791 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
LYSMD4-202ENST00000344791 A6NED7 52 aa11.04□□□□□ -0.64
LYSMD4-202ENST00000344791 LINC00313P59037 77 aa11.04□□□□□ -0.64
LYSMD4-202ENST00000344791 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
LYSMD4-202ENST00000344791 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.64
LYSMD4-202ENST00000344791 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.65
LYSMD4-202ENST00000344791 SPTSSBQ8NFR3 76 aa11.01□□□□□ -0.65
LYSMD4-202ENST00000344791 PKD1P98161 4303 aa10.99□□□□□ -0.65
LYSMD4-202ENST00000344791 KRTAP13-3Q3SY46 172 aa10.99□□□□□ -0.65
LYSMD4-202ENST00000344791 FAT2Q9NYQ8 4349 aa10.96□□□□□ -0.65
LYSMD4-202ENST00000344791 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
LYSMD4-202ENST00000344791 Q6ZSA8 131 aa10.93□□□□□ -0.66
LYSMD4-202ENST00000344791 LCA10Q71F78 164 aa10.93□□□□□ -0.66
LYSMD4-202ENST00000344791 PLA2G1BP04054 148 aaKnown RBP10.92□□□□□ -0.66
LYSMD4-202ENST00000344791 PMAIP1Q13794 54 aa10.92□□□□□ -0.66
LYSMD4-202ENST00000344791 Q75L30 129 aa10.92□□□□□ -0.66
LYSMD4-202ENST00000344791 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
LYSMD4-202ENST00000344791 KRTAP1-4P0C5Y4 121 aa10.91□□□□□ -0.66
LYSMD4-202ENST00000344791 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
LYSMD4-202ENST00000344791 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
LYSMD4-202ENST00000344791 LINC01558Q9Y6Z2 57 aa10.88□□□□□ -0.67
LYSMD4-202ENST00000344791 FAM229AH3BQW9 127 aa10.87□□□□□ -0.67
LYSMD4-202ENST00000344791 SPINK7P58062 85 aa10.87□□□□□ -0.67
LYSMD4-202ENST00000344791 C4orf48Q5BLP8 95 aa10.87□□□□□ -0.67
LYSMD4-202ENST00000344791 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
LYSMD4-202ENST00000344791 ACYP2P14621 99 aa10.85□□□□□ -0.67
LYSMD4-202ENST00000344791 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
LYSMD4-202ENST00000344791 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
LYSMD4-202ENST00000344791 DMAC1Q96GE9 116 aa10.76□□□□□ -0.69
LYSMD4-202ENST00000344791 CDC42SE1Q9NRR8 79 aa10.75□□□□□ -0.69
LYSMD4-202ENST00000344791 ATP11AUNQ6ZP68 121 aa10.7□□□□□ -0.7
LYSMD4-202ENST00000344791 C7orf65Q6ZTY9 151 aa10.69□□□□□ -0.7
LYSMD4-202ENST00000344791 SPINK1P00995 79 aa10.68□□□□□ -0.7
LYSMD4-202ENST00000344791 FAT1Q14517 4588 aa10.68□□□□□ -0.7
LYSMD4-202ENST00000344791 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
LYSMD4-202ENST00000344791 C9orf92A6NGG3 77 aa10.66□□□□□ -0.7
LYSMD4-202ENST00000344791 Q8N1X5 172 aa10.65□□□□□ -0.7
LYSMD4-202ENST00000344791 A0A1B0GU69 56 aa10.64□□□□□ -0.71
LYSMD4-202ENST00000344791 SACSQ9NZJ4 4579 aa10.63□□□□□ -0.71
LYSMD4-202ENST00000344791 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
LYSMD4-202ENST00000344791 A6NN06 94 aa10.57□□□□□ -0.72
LYSMD4-202ENST00000344791 KTN1-AS1Q86SY8 53 aa10.55□□□□□ -0.72
LYSMD4-202ENST00000344791 SEC61GP60059 68 aa10.54□□□□□ -0.72
LYSMD4-202ENST00000344791 APOBP04114 4563 aaKnown RBP10.41□□□□□ -0.74
LYSMD4-202ENST00000344791 MIR22HGQ0VDD5 57 aa10.4□□□□□ -0.74
LYSMD4-202ENST00000344791 UQCR11O14957 56 aa10.39□□□□□ -0.75
LYSMD4-202ENST00000344791 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
LYSMD4-202ENST00000344791 RBM12B-AS1Q9P1G2 102 aa10.36□□□□□ -0.75
LYSMD4-202ENST00000344791 A0A1B0GVY2 172 aa10.35□□□□□ -0.75
LYSMD4-202ENST00000344791 RPS29P62273 56 aaKnown RBP10.35□□□□□ -0.75
LYSMD4-202ENST00000344791 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
LYSMD4-202ENST00000344791 PRAC1Q96KF2 57 aa10.34□□□□□ -0.75
LYSMD4-202ENST00000344791 ADM2Q7Z4H4 148 aa10.33□□□□□ -0.76
LYSMD4-202ENST00000344791 SPATA8Q6RVD6 105 aa10.32□□□□□ -0.76
LYSMD4-202ENST00000344791 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
LYSMD4-202ENST00000344791 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
LYSMD4-202ENST00000344791 A8MUU9 505 aa10.29□□□□□ -0.76
LYSMD4-202ENST00000344791 C20orf166-AS1Q96NR2 134 aa10.28□□□□□ -0.76
LYSMD4-202ENST00000344791 DMBT1Q9UGM3 2413 aaPredicted RBP10.28□□□□□ -0.76
LYSMD4-202ENST00000344791 RYR2Q92736 4967 aa10.26□□□□□ -0.77
LYSMD4-202ENST00000344791 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
LYSMD4-202ENST00000344791 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
LYSMD4-202ENST00000344791 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
LYSMD4-202ENST00000344791 MYCBP2O75592 4640 aa10.18□□□□□ -0.78
LYSMD4-202ENST00000344791 H0YAA0 97 aa10.09□□□□□ -0.79
LYSMD4-202ENST00000344791 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
LYSMD4-202ENST00000344791 HSPG2P98160 4391 aa10.06□□□□□ -0.8
LYSMD4-202ENST00000344791 Q5VSD8 79 aa10.05□□□□□ -0.8
LYSMD4-202ENST00000344791 A0A1B0GU33 70 aa10.04□□□□□ -0.8
LYSMD4-202ENST00000344791 TNXBP22105 4242 aa10.03□□□□□ -0.8
LYSMD4-202ENST00000344791 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.8
LYSMD4-202ENST00000344791 RYR3Q15413 4870 aa9.98□□□□□ -0.81
LYSMD4-202ENST00000344791 H1FX-AS1Q4G0G2 97 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms