RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 A0A1W2PNM2 257 aa7.16□□□□□ -1.26
HLA-DQA1-201ENST00000343139 A0A1B0GW54 56 aa7.15□□□□□ -1.27
HLA-DQA1-201ENST00000343139 ANAPC13Q9BS18 74 aa7.15□□□□□ -1.27
HLA-DQA1-201ENST00000343139 A0A087WSZ3 146 aa7.14□□□□□ -1.27
HLA-DQA1-201ENST00000343139 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
HLA-DQA1-201ENST00000343139 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
HLA-DQA1-201ENST00000343139 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
HLA-DQA1-201ENST00000343139 Q96NJ1 140 aa7.09□□□□□ -1.27
HLA-DQA1-201ENST00000343139 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
HLA-DQA1-201ENST00000343139 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
HLA-DQA1-201ENST00000343139 Q6ZVQ6 151 aa7.08□□□□□ -1.28
HLA-DQA1-201ENST00000343139 HIST1H4AP62805 103 aaKnown RBP7.08□□□□□ -1.28
HLA-DQA1-201ENST00000343139 CXCL6P80162 114 aa7.08□□□□□ -1.28
HLA-DQA1-201ENST00000343139 IGKV3D-7A0A0C4DH55 119 aa7.07□□□□□ -1.28
HLA-DQA1-201ENST00000343139 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
HLA-DQA1-201ENST00000343139 ATOX1O00244 68 aa7.04□□□□□ -1.28
HLA-DQA1-201ENST00000343139 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
HLA-DQA1-201ENST00000343139 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
HLA-DQA1-201ENST00000343139 Q75L30 129 aa7.01□□□□□ -1.29
HLA-DQA1-201ENST00000343139 KRTAP4-1Q9BYQ7 146 aa7.01□□□□□ -1.29
HLA-DQA1-201ENST00000343139 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
HLA-DQA1-201ENST00000343139 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
HLA-DQA1-201ENST00000343139 NREPQ16612 68 aa6.99□□□□□ -1.29
HLA-DQA1-201ENST00000343139 A0A087WVE0 104 aa6.98□□□□□ -1.29
HLA-DQA1-201ENST00000343139 C20orf166-AS1Q96NR2 134 aa6.98□□□□□ -1.29
HLA-DQA1-201ENST00000343139 J3KT08 172 aa6.97□□□□□ -1.29
HLA-DQA1-201ENST00000343139 UQCRQO14949 82 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 A8MUU9 505 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 BPY2O14599 106 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 COX7CP15954 63 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 LINC00313P59037 77 aa6.95□□□□□ -1.3
HLA-DQA1-201ENST00000343139 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
HLA-DQA1-201ENST00000343139 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
HLA-DQA1-201ENST00000343139 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
HLA-DQA1-201ENST00000343139 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
HLA-DQA1-201ENST00000343139 DSCR10P59022 87 aa6.92□□□□□ -1.3
HLA-DQA1-201ENST00000343139 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
HLA-DQA1-201ENST00000343139 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
HLA-DQA1-201ENST00000343139 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
HLA-DQA1-201ENST00000343139 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
HLA-DQA1-201ENST00000343139 IGHV6-1A0A0B4J1U7 121 aa6.89□□□□□ -1.31
HLA-DQA1-201ENST00000343139 NDUFB1O75438 58 aa6.88□□□□□ -1.31
HLA-DQA1-201ENST00000343139 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
HLA-DQA1-201ENST00000343139 TRAV7A0A075B6U4 112 aa6.86□□□□□ -1.31
HLA-DQA1-201ENST00000343139 A8MWP4 228 aa6.86□□□□□ -1.31
HLA-DQA1-201ENST00000343139 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
HLA-DQA1-201ENST00000343139 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
HLA-DQA1-201ENST00000343139 PRR15Q8IV56 129 aa6.82□□□□□ -1.32
HLA-DQA1-201ENST00000343139 Q8N9L7 120 aa6.82□□□□□ -1.32
HLA-DQA1-201ENST00000343139 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
HLA-DQA1-201ENST00000343139 K7EQZ3 153 aa6.79□□□□□ -1.32
HLA-DQA1-201ENST00000343139 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
HLA-DQA1-201ENST00000343139 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
HLA-DQA1-201ENST00000343139 HCG22E2RYF7 251 aa6.77□□□□□ -1.33
HLA-DQA1-201ENST00000343139 TMEM258P61165 79 aa6.77□□□□□ -1.33
HLA-DQA1-201ENST00000343139 OCR1Q9BZK8 76 aa6.77□□□□□ -1.33
HLA-DQA1-201ENST00000343139 KLKP1Q107X0 134 aa6.76□□□□□ -1.33
HLA-DQA1-201ENST00000343139 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
HLA-DQA1-201ENST00000343139 MT1HP80294 61 aa6.74□□□□□ -1.33
HLA-DQA1-201ENST00000343139 C20orf197Q8N268 126 aa6.74□□□□□ -1.33
HLA-DQA1-201ENST00000343139 MMP24-AS1A0A0U1RRL7 71 aa6.73□□□□□ -1.33
HLA-DQA1-201ENST00000343139 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
HLA-DQA1-201ENST00000343139 ZCCHC13Q8WW36 166 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-201ENST00000343139 NDUFC1O43677 76 aa6.72□□□□□ -1.33
HLA-DQA1-201ENST00000343139 COX6B2Q6YFQ2 88 aa6.72□□□□□ -1.33
HLA-DQA1-201ENST00000343139 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA1-201ENST00000343139 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-201ENST00000343139 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
HLA-DQA1-201ENST00000343139 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
HLA-DQA1-201ENST00000343139 CASC2Q6XLA1 102 aa6.67□□□□□ -1.34
HLA-DQA1-201ENST00000343139 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
HLA-DQA1-201ENST00000343139 H7BZZ5 65 aa6.65□□□□□ -1.34
HLA-DQA1-201ENST00000343139 C5orf47Q569G3 176 aa6.65□□□□□ -1.34
HLA-DQA1-201ENST00000343139 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
HLA-DQA1-201ENST00000343139 HRES1P13985 223 aa6.65□□□□□ -1.35
HLA-DQA1-201ENST00000343139 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
HLA-DQA1-201ENST00000343139 SPINK7P58062 85 aa6.63□□□□□ -1.35
HLA-DQA1-201ENST00000343139 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
HLA-DQA1-201ENST00000343139 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
HLA-DQA1-201ENST00000343139 FAM236DA0A1B0GTK5 79 aa6.61□□□□□ -1.35
HLA-DQA1-201ENST00000343139 H3BPC8 53 aa6.61□□□□□ -1.35
HLA-DQA1-201ENST00000343139 FAM236CP0DP71 79 aa6.61□□□□□ -1.35
HLA-DQA1-201ENST00000343139 M0R2T5 61 aa6.6□□□□□ -1.35
HLA-DQA1-201ENST00000343139 MP68P56378 58 aa6.6□□□□□ -1.35
HLA-DQA1-201ENST00000343139 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
HLA-DQA1-201ENST00000343139 NDUFS5O43920 106 aa6.59□□□□□ -1.35
HLA-DQA1-201ENST00000343139 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
HLA-DQA1-201ENST00000343139 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
HLA-DQA1-201ENST00000343139 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
HLA-DQA1-201ENST00000343139 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
HLA-DQA1-201ENST00000343139 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
HLA-DQA1-201ENST00000343139 H0Y9P7 68 aa6.53□□□□□ -1.36
HLA-DQA1-201ENST00000343139 Q5W150 140 aa6.52□□□□□ -1.36
HLA-DQA1-201ENST00000343139 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
HLA-DQA1-201ENST00000343139 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
HLA-DQA1-201ENST00000343139 SPANXA2-OT1Q8N9U9 137 aa6.46□□□□□ -1.38
HLA-DQA1-201ENST00000343139 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
HLA-DQA1-201ENST00000343139 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
HLA-DQA1-201ENST00000343139 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms