RNA–Protein interactions for RNA: ENST00000343028.8

TM7SF3-201, Transcript of transmembrane 7 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM7SF3, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-201ENST00000343028 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
TM7SF3-201ENST00000343028 SPINK6Q6UWN8 80 aa11.54□□□□□ -0.56
TM7SF3-201ENST00000343028 IGLV7-43P04211 117 aa11.54□□□□□ -0.56
TM7SF3-201ENST00000343028 CHKB-CPT1BH3BT56 60 aa11.51□□□□□ -0.57
TM7SF3-201ENST00000343028 A0A087X002 238 aa11.5□□□□□ -0.57
TM7SF3-201ENST00000343028 NOTCH2NLQ7Z3S9 236 aa11.5□□□□□ -0.57
TM7SF3-201ENST00000343028 NDUFS5O43920 106 aa11.49□□□□□ -0.57
TM7SF3-201ENST00000343028 Q8N9P0 234 aaPredicted RBP11.48□□□□□ -0.57
TM7SF3-201ENST00000343028 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
TM7SF3-201ENST00000343028 CD164Q04900 197 aa11.47□□□□□ -0.57
TM7SF3-201ENST00000343028 PRR15LQ9BU68 103 aa11.47□□□□□ -0.57
TM7SF3-201ENST00000343028 C8orf17Q9NRJ1 99 aa11.47□□□□□ -0.57
TM7SF3-201ENST00000343028 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
TM7SF3-201ENST00000343028 PKD1P98161 4303 aa11.45□□□□□ -0.58
TM7SF3-201ENST00000343028 SPTSSBQ8NFR3 76 aa11.44□□□□□ -0.58
TM7SF3-201ENST00000343028 A0A1B0GVX0 72 aa11.44□□□□□ -0.58
TM7SF3-201ENST00000343028 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
TM7SF3-201ENST00000343028 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
TM7SF3-201ENST00000343028 FAT2Q9NYQ8 4349 aa11.42□□□□□ -0.58
TM7SF3-201ENST00000343028 PCOTHQ58A44 107 aa11.42□□□□□ -0.58
TM7SF3-201ENST00000343028 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
TM7SF3-201ENST00000343028 LCA10Q71F78 164 aa11.37□□□□□ -0.59
TM7SF3-201ENST00000343028 KTN1-AS1Q86SY8 53 aa11.37□□□□□ -0.59
TM7SF3-201ENST00000343028 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
TM7SF3-201ENST00000343028 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
TM7SF3-201ENST00000343028 A6NED7 52 aa11.35□□□□□ -0.59
TM7SF3-201ENST00000343028 ASB16-AS1Q495Z4 193 aa11.35□□□□□ -0.59
TM7SF3-201ENST00000343028 MRPL34Q9BQ48 92 aaKnown RBP11.33□□□□□ -0.6
TM7SF3-201ENST00000343028 H3BPC8 53 aa11.33□□□□□ -0.6
TM7SF3-201ENST00000343028 COA5Q86WW8 74 aa11.32□□□□□ -0.6
TM7SF3-201ENST00000343028 RBM12B-AS1Q9P1G2 102 aa11.32□□□□□ -0.6
TM7SF3-201ENST00000343028 Q75L30 129 aa11.31□□□□□ -0.6
TM7SF3-201ENST00000343028 KRTAP13-2Q52LG2 175 aa11.3□□□□□ -0.6
TM7SF3-201ENST00000343028 ATP11AUNQ6ZP68 121 aa11.3□□□□□ -0.6
TM7SF3-201ENST00000343028 TP53AIP1Q9HCN2 124 aa11.28□□□□□ -0.6
TM7SF3-201ENST00000343028 Q6ZSA8 131 aa11.28□□□□□ -0.6
TM7SF3-201ENST00000343028 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
TM7SF3-201ENST00000343028 SSBP3-AS1Q7Z2R9 100 aa11.25□□□□□ -0.61
TM7SF3-201ENST00000343028 A6NN06 94 aa11.24□□□□□ -0.61
TM7SF3-201ENST00000343028 Q5W150 140 aa11.23□□□□□ -0.61
TM7SF3-201ENST00000343028 RETNLBQ9BQ08 111 aa11.22□□□□□ -0.61
TM7SF3-201ENST00000343028 IGLV7-46A0A075B6I9 117 aa11.22□□□□□ -0.61
TM7SF3-201ENST00000343028 SPAG11AQ6PDA7 123 aa11.2□□□□□ -0.62
TM7SF3-201ENST00000343028 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
TM7SF3-201ENST00000343028 SACSQ9NZJ4 4579 aa11.17□□□□□ -0.62
TM7SF3-201ENST00000343028 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
TM7SF3-201ENST00000343028 PLA2G1BP04054 148 aaKnown RBP11.13□□□□□ -0.63
TM7SF3-201ENST00000343028 LINC00313P59037 77 aa11.13□□□□□ -0.63
TM7SF3-201ENST00000343028 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
TM7SF3-201ENST00000343028 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
TM7SF3-201ENST00000343028 SPINK7P58062 85 aa11.1□□□□□ -0.63
TM7SF3-201ENST00000343028 C7orf65Q6ZTY9 151 aa11.1□□□□□ -0.63
TM7SF3-201ENST00000343028 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
TM7SF3-201ENST00000343028 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
TM7SF3-201ENST00000343028 C8orf87E5RJ46 101 aa11.04□□□□□ -0.64
TM7SF3-201ENST00000343028 HRES1P13985 223 aa11.03□□□□□ -0.64
TM7SF3-201ENST00000343028 FAT1Q14517 4588 aa11.03□□□□□ -0.64
TM7SF3-201ENST00000343028 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.64
TM7SF3-201ENST00000343028 DYNC1H1Q14204 4646 aaKnown RBP11.02□□□□□ -0.65
TM7SF3-201ENST00000343028 PRR26Q8N8Z3 221 aa11.01□□□□□ -0.65
TM7SF3-201ENST00000343028 KRTAP16-1A8MUX0 517 aa10.94□□□□□ -0.66
TM7SF3-201ENST00000343028 KRTAP21-3Q3LHN1 58 aa10.93□□□□□ -0.66
TM7SF3-201ENST00000343028 FAM229AH3BQW9 127 aa10.92□□□□□ -0.66
TM7SF3-201ENST00000343028 KMT2CQ8NEZ4 4911 aaKnown RBP10.91□□□□□ -0.66
TM7SF3-201ENST00000343028 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
TM7SF3-201ENST00000343028 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
TM7SF3-201ENST00000343028 PRAC1Q96KF2 57 aa10.88□□□□□ -0.67
TM7SF3-201ENST00000343028 SPINK1P00995 79 aa10.88□□□□□ -0.67
TM7SF3-201ENST00000343028 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
TM7SF3-201ENST00000343028 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
TM7SF3-201ENST00000343028 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
TM7SF3-201ENST00000343028 RYR2Q92736 4967 aa10.81□□□□□ -0.68
TM7SF3-201ENST00000343028 ACYP2P14621 99 aa10.79□□□□□ -0.68
TM7SF3-201ENST00000343028 A0A1B0GVY2 172 aa10.79□□□□□ -0.68
TM7SF3-201ENST00000343028 C9orf92A6NGG3 77 aa10.78□□□□□ -0.68
TM7SF3-201ENST00000343028 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
TM7SF3-201ENST00000343028 KRTAP10-4P60372 401 aaPredicted RBP10.71□□□□□ -0.69
TM7SF3-201ENST00000343028 Q8N1X5 172 aa10.65□□□□□ -0.7
TM7SF3-201ENST00000343028 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
TM7SF3-201ENST00000343028 A0A1B0GU69 56 aa10.64□□□□□ -0.71
TM7SF3-201ENST00000343028 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
TM7SF3-201ENST00000343028 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
TM7SF3-201ENST00000343028 RPS29P62273 56 aaKnown RBP10.59□□□□□ -0.71
TM7SF3-201ENST00000343028 SPATA8Q6RVD6 105 aa10.59□□□□□ -0.71
TM7SF3-201ENST00000343028 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
TM7SF3-201ENST00000343028 MIR22HGQ0VDD5 57 aa10.55□□□□□ -0.72
TM7SF3-201ENST00000343028 DMBT1Q9UGM3 2413 aaPredicted RBP10.54□□□□□ -0.72
TM7SF3-201ENST00000343028 RYR3Q15413 4870 aa10.53□□□□□ -0.72
TM7SF3-201ENST00000343028 UQCR11O14957 56 aa10.5□□□□□ -0.73
TM7SF3-201ENST00000343028 HSPG2P98160 4391 aa10.47□□□□□ -0.73
TM7SF3-201ENST00000343028 A8MUU9 505 aa10.46□□□□□ -0.74
TM7SF3-201ENST00000343028 CSAG1Q6PB30 78 aa10.46□□□□□ -0.74
TM7SF3-201ENST00000343028 C20orf166-AS1Q96NR2 134 aa10.46□□□□□ -0.74
TM7SF3-201ENST00000343028 H3BS24 57 aa10.45□□□□□ -0.74
TM7SF3-201ENST00000343028 TNXBP22105 4242 aa10.42□□□□□ -0.74
TM7SF3-201ENST00000343028 MYCBP2O75592 4640 aa10.42□□□□□ -0.74
TM7SF3-201ENST00000343028 Q5VSD8 79 aa10.41□□□□□ -0.74
TM7SF3-201ENST00000343028 FAT3Q8TDW7 4589 aa10.38□□□□□ -0.75
TM7SF3-201ENST00000343028 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
TM7SF3-201ENST00000343028 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms