RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.64
CFAP54-201ENST00000342887 NDUFS5O43920 106 aa4.83□□□□□ -1.64
CFAP54-201ENST00000342887 A8MWP4 228 aa4.83□□□□□ -1.64
CFAP54-201ENST00000342887 H3BPC8 53 aa4.83□□□□□ -1.64
CFAP54-201ENST00000342887 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
CFAP54-201ENST00000342887 NUPR2A6NF83 97 aa4.82□□□□□ -1.64
CFAP54-201ENST00000342887 DEFB116Q30KQ4 102 aa4.82□□□□□ -1.64
CFAP54-201ENST00000342887 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
CFAP54-201ENST00000342887 A0A087WTM6 91 aa4.81□□□□□ -1.64
CFAP54-201ENST00000342887 PRLHP81277 87 aa4.81□□□□□ -1.64
CFAP54-201ENST00000342887 A6NED7 52 aa4.8□□□□□ -1.64
CFAP54-201ENST00000342887 Q75L30 129 aa4.8□□□□□ -1.64
CFAP54-201ENST00000342887 LINC00313P59037 77 aa4.8□□□□□ -1.64
CFAP54-201ENST00000342887 A0A0G2JQZ4 141 aa4.79□□□□□ -1.64
CFAP54-201ENST00000342887 SPINK7P58062 85 aa4.78□□□□□ -1.64
CFAP54-201ENST00000342887 RYR2Q92736 4967 aa4.78□□□□□ -1.64
CFAP54-201ENST00000342887 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
CFAP54-201ENST00000342887 LOC101927531A0A1B0GV80 90 aa4.77□□□□□ -1.65
CFAP54-201ENST00000342887 F8P00451 2351 aa4.77□□□□□ -1.65
CFAP54-201ENST00000342887 STAB2Q8WWQ8 2551 aa4.76□□□□□ -1.65
CFAP54-201ENST00000342887 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
CFAP54-201ENST00000342887 KRTAP16-1A8MUX0 517 aa4.76□□□□□ -1.65
CFAP54-201ENST00000342887 DEFB105AQ8NG35 78 aa4.75□□□□□ -1.65
CFAP54-201ENST00000342887 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
CFAP54-201ENST00000342887 FAT1Q14517 4588 aa4.75□□□□□ -1.65
CFAP54-201ENST00000342887 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
CFAP54-201ENST00000342887 A0A087WSZ3 146 aa4.73□□□□□ -1.65
CFAP54-201ENST00000342887 KRTAP1-4P0C5Y4 121 aa4.73□□□□□ -1.65
CFAP54-201ENST00000342887 LINC01554Q52M75 96 aa4.73□□□□□ -1.65
CFAP54-201ENST00000342887 PSORS1C2Q9UIG4 136 aa4.73□□□□□ -1.65
CFAP54-201ENST00000342887 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
CFAP54-201ENST00000342887 ZNF861PO60384 105 aa4.72□□□□□ -1.65
CFAP54-201ENST00000342887 SPAG11AQ6PDA7 123 aa4.71□□□□□ -1.66
CFAP54-201ENST00000342887 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
CFAP54-201ENST00000342887 COA5Q86WW8 74 aa4.7□□□□□ -1.66
CFAP54-201ENST00000342887 RTL8CO15255 209 aa4.7□□□□□ -1.66
CFAP54-201ENST00000342887 WFDC13Q8IUB5 93 aa4.69□□□□□ -1.66
CFAP54-201ENST00000342887 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 KRTAP13-2Q52LG2 175 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 NOTCH1P46531 2555 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 NDUFB1O75438 58 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 TP53AIP1Q9HCN2 124 aa4.68□□□□□ -1.66
CFAP54-201ENST00000342887 A0A087X002 238 aa4.67□□□□□ -1.66
CFAP54-201ENST00000342887 IGLV7-43P04211 117 aa4.67□□□□□ -1.66
CFAP54-201ENST00000342887 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
CFAP54-201ENST00000342887 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
CFAP54-201ENST00000342887 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
CFAP54-201ENST00000342887 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
CFAP54-201ENST00000342887 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
CFAP54-201ENST00000342887 RPS29P62273 56 aaKnown RBP4.65□□□□□ -1.67
CFAP54-201ENST00000342887 PLA2G1BP04054 148 aaKnown RBP4.64□□□□□ -1.67
CFAP54-201ENST00000342887 H0Y9P7 68 aa4.64□□□□□ -1.67
CFAP54-201ENST00000342887 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
CFAP54-201ENST00000342887 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
CFAP54-201ENST00000342887 A0A1B0GVY2 172 aa4.63□□□□□ -1.67
CFAP54-201ENST00000342887 SSBP3-AS1Q7Z2R9 100 aa4.62□□□□□ -1.67
CFAP54-201ENST00000342887 MP68P56378 58 aa4.62□□□□□ -1.67
CFAP54-201ENST00000342887 Q5W150 140 aa4.62□□□□□ -1.67
CFAP54-201ENST00000342887 PCOTHQ58A44 107 aa4.6□□□□□ -1.67
CFAP54-201ENST00000342887 UBE2DNLQ8IWF7 75 aa4.6□□□□□ -1.67
CFAP54-201ENST00000342887 MRPL34Q9BQ48 92 aaKnown RBP4.6□□□□□ -1.67
CFAP54-201ENST00000342887 CIRBP-AS1Q8TBR5 109 aa4.6□□□□□ -1.67
CFAP54-201ENST00000342887 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
CFAP54-201ENST00000342887 HRES1P13985 223 aa4.59□□□□□ -1.68
CFAP54-201ENST00000342887 KRTAP10-1P60331 282 aa4.58□□□□□ -1.68
CFAP54-201ENST00000342887 TGP01266 2768 aa4.57□□□□□ -1.68
CFAP54-201ENST00000342887 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
CFAP54-201ENST00000342887 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
CFAP54-201ENST00000342887 C1orf134Q5TEV5 83 aa4.56□□□□□ -1.68
CFAP54-201ENST00000342887 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
CFAP54-201ENST00000342887 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
CFAP54-201ENST00000342887 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
CFAP54-201ENST00000342887 RYR3Q15413 4870 aa4.51□□□□□ -1.69
CFAP54-201ENST00000342887 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
CFAP54-201ENST00000342887 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
CFAP54-201ENST00000342887 RYR1P21817 5038 aa4.49□□□□□ -1.69
CFAP54-201ENST00000342887 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
CFAP54-201ENST00000342887 P0C880 135 aa4.47□□□□□ -1.69
CFAP54-201ENST00000342887 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
CFAP54-201ENST00000342887 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
CFAP54-201ENST00000342887 A8MUU9 505 aa4.45□□□□□ -1.7
CFAP54-201ENST00000342887 ROMO1P60602 79 aa4.45□□□□□ -1.7
CFAP54-201ENST00000342887 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
CFAP54-201ENST00000342887 KRTAP17-1Q9BYP8 105 aa4.43□□□□□ -1.7
CFAP54-201ENST00000342887 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
CFAP54-201ENST00000342887 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
CFAP54-201ENST00000342887 SPINK1P00995 79 aa4.42□□□□□ -1.7
CFAP54-201ENST00000342887 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
CFAP54-201ENST00000342887 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
CFAP54-201ENST00000342887 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
CFAP54-201ENST00000342887 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
CFAP54-201ENST00000342887 MYCBP2O75592 4640 aa4.39□□□□□ -1.71
CFAP54-201ENST00000342887 A0A1B0GU69 56 aa4.36□□□□□ -1.71
CFAP54-201ENST00000342887 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
CFAP54-201ENST00000342887 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
CFAP54-201ENST00000342887 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
CFAP54-201ENST00000342887 LY6G6CO95867 125 aa4.34□□□□□ -1.71
CFAP54-201ENST00000342887 ACYP2P14621 99 aa4.33□□□□□ -1.72
CFAP54-201ENST00000342887 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms