RNA–Protein interactions for RNA: ENST00000342835.8

SPTB-201, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-201ENST00000342835 SMR3BP02814 79 aaPredicted RBP12.76□□□□□ -0.37
SPTB-201ENST00000342835 MP68P56378 58 aa12.76□□□□□ -0.37
SPTB-201ENST00000342835 TP53AIP1Q9HCN2 124 aa12.74□□□□□ -0.37
SPTB-201ENST00000342835 H3BPC8 53 aa12.72□□□□□ -0.37
SPTB-201ENST00000342835 SPINK1P00995 79 aa12.72□□□□□ -0.37
SPTB-201ENST00000342835 C8orf87E5RJ46 101 aa12.71□□□□□ -0.37
SPTB-201ENST00000342835 FAM236DA0A1B0GTK5 79 aa12.71□□□□□ -0.38
SPTB-201ENST00000342835 FAM236CP0DP71 79 aa12.71□□□□□ -0.38
SPTB-201ENST00000342835 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.38
SPTB-201ENST00000342835 PKHD1P08F94 4074 aa12.7□□□□□ -0.38
SPTB-201ENST00000342835 VPS13BQ7Z7G8 4022 aa12.69□□□□□ -0.38
SPTB-201ENST00000342835 DYNC1H1Q14204 4646 aaKnown RBP12.69□□□□□ -0.38
SPTB-201ENST00000342835 SPAG11AQ6PDA7 123 aa12.68□□□□□ -0.38
SPTB-201ENST00000342835 RPS29P62273 56 aaKnown RBP12.68□□□□□ -0.38
SPTB-201ENST00000342835 MRPL34Q9BQ48 92 aaKnown RBP12.68□□□□□ -0.38
SPTB-201ENST00000342835 KRTAP10-4P60372 401 aaPredicted RBP12.67□□□□□ -0.38
SPTB-201ENST00000342835 C1orf195Q5TG92 126 aa12.66□□□□□ -0.38
SPTB-201ENST00000342835 ZCCHC13Q8WW36 166 aaKnown RBP12.66□□□□□ -0.38
SPTB-201ENST00000342835 BIRC6Q9NR09 4857 aa12.66□□□□□ -0.38
SPTB-201ENST00000342835 H0Y9P7 68 aa12.65□□□□□ -0.38
SPTB-201ENST00000342835 RPS28P62857 69 aaKnown RBP12.63□□□□□ -0.39
SPTB-201ENST00000342835 PRR26Q8N8Z3 221 aa12.63□□□□□ -0.39
SPTB-201ENST00000342835 LINC00304Q8N9R0 145 aa12.63□□□□□ -0.39
SPTB-201ENST00000342835 TRAV22A0A0B4J277 110 aa12.62□□□□□ -0.39
SPTB-201ENST00000342835 FAM229AH3BQW9 127 aa12.61□□□□□ -0.39
SPTB-201ENST00000342835 NDUFS5O43920 106 aa12.59□□□□□ -0.39
SPTB-201ENST00000342835 LINC00208Q96KT6 92 aa12.58□□□□□ -0.4
SPTB-201ENST00000342835 LINC00313P59037 77 aa12.57□□□□□ -0.4
SPTB-201ENST00000342835 NOTCH2NLQ7Z3S9 236 aa12.57□□□□□ -0.4
SPTB-201ENST00000342835 APOBP04114 4563 aaKnown RBP12.54□□□□□ -0.4
SPTB-201ENST00000342835 C1orf64Q8NEQ6 169 aa12.52□□□□□ -0.41
SPTB-201ENST00000342835 SERP1Q9Y6X1 66 aa12.52□□□□□ -0.41
SPTB-201ENST00000342835 Q5VSD8 79 aa12.42□□□□□ -0.42
SPTB-201ENST00000342835 Q8N9P0 234 aaPredicted RBP12.42□□□□□ -0.42
SPTB-201ENST00000342835 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
SPTB-201ENST00000342835 LOC101927531A0A1B0GV80 90 aa12.38□□□□□ -0.43
SPTB-201ENST00000342835 CYP4F30PQ9H0H9 118 aa12.37□□□□□ -0.43
SPTB-201ENST00000342835 KRTAP16-1A8MUX0 517 aa12.36□□□□□ -0.43
SPTB-201ENST00000342835 KIAA1109Q2LD37 5005 aa12.36□□□□□ -0.43
SPTB-201ENST00000342835 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
SPTB-201ENST00000342835 FAT1Q14517 4588 aa12.31□□□□□ -0.44
SPTB-201ENST00000342835 PKHD1L1Q86WI1 4243 aa12.31□□□□□ -0.44
SPTB-201ENST00000342835 OXTP01178 125 aa12.3□□□□□ -0.44
SPTB-201ENST00000342835 HERC2O95714 4834 aa12.29□□□□□ -0.44
SPTB-201ENST00000342835 Q5W150 140 aa12.28□□□□□ -0.44
SPTB-201ENST00000342835 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
SPTB-201ENST00000342835 SMIM26A0A096LP01 95 aa12.24□□□□□ -0.45
SPTB-201ENST00000342835 PCOTHQ58A44 107 aa12.24□□□□□ -0.45
SPTB-201ENST00000342835 KRTAP10-8P60410 259 aa12.23□□□□□ -0.45
SPTB-201ENST00000342835 RYR1P21817 5038 aa12.22□□□□□ -0.45
SPTB-201ENST00000342835 PRR4Q16378 134 aa12.21□□□□□ -0.45
SPTB-201ENST00000342835 Q8N1X5 172 aa12.2□□□□□ -0.46
SPTB-201ENST00000342835 KRTAP17-1Q9BYP8 105 aa12.2□□□□□ -0.46
SPTB-201ENST00000342835 HSPG2P98160 4391 aa12.18□□□□□ -0.46
SPTB-201ENST00000342835 IGKV2-30P06310 120 aa12.14□□□□□ -0.47
SPTB-201ENST00000342835 RETNLBQ9BQ08 111 aa12.12□□□□□ -0.47
SPTB-201ENST00000342835 FP248Q71RG6 208 aaPredicted RBP12.09□□□□□ -0.47
SPTB-201ENST00000342835 C20orf166-AS1Q96NR2 134 aa12.09□□□□□ -0.47
SPTB-201ENST00000342835 C9orf92A6NGG3 77 aa12.07□□□□□ -0.48
SPTB-201ENST00000342835 A8MUU9 505 aa12.07□□□□□ -0.48
SPTB-201ENST00000342835 KRTAP4-5Q9BYR2 181 aa12.06□□□□□ -0.48
SPTB-201ENST00000342835 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
SPTB-201ENST00000342835 IGKV2D-30A0A075B6S6 120 aa12□□□□□ -0.49
SPTB-201ENST00000342835 HRES1P13985 223 aa12□□□□□ -0.49
SPTB-201ENST00000342835 COA5Q86WW8 74 aa12□□□□□ -0.49
SPTB-201ENST00000342835 C7orf65Q6ZTY9 151 aa11.99□□□□□ -0.49
SPTB-201ENST00000342835 PCLOQ9Y6V0 5065 aa11.98□□□□□ -0.49
SPTB-201ENST00000342835 ABCA13Q86UQ4 5058 aa11.95□□□□□ -0.5
SPTB-201ENST00000342835 Q75L30 129 aa11.95□□□□□ -0.5
SPTB-201ENST00000342835 MT1HL1P0DM35 61 aa11.94□□□□□ -0.5
SPTB-201ENST00000342835 ACYP2P14621 99 aa11.94□□□□□ -0.5
SPTB-201ENST00000342835 DMAC1Q96GE9 116 aa11.93□□□□□ -0.5
SPTB-201ENST00000342835 V9GYY9 64 aa11.93□□□□□ -0.5
SPTB-201ENST00000342835 TNXBP22105 4242 aa11.92□□□□□ -0.5
SPTB-201ENST00000342835 Q1T7F1 81 aa11.91□□□□□ -0.5
SPTB-201ENST00000342835 C4orf26Q17RF5 130 aa11.9□□□□□ -0.5
SPTB-201ENST00000342835 MPLKIPQ8TAP9 179 aa11.9□□□□□ -0.5
SPTB-201ENST00000342835 FAT3Q8TDW7 4589 aa11.84□□□□□ -0.51
SPTB-201ENST00000342835 LRP1Q07954 4544 aaKnown RBP11.83□□□□□ -0.52
SPTB-201ENST00000342835 PRO0628Q9UI54 55 aa11.8□□□□□ -0.52
SPTB-201ENST00000342835 ATP11AUNQ6ZP68 121 aa11.78□□□□□ -0.52
SPTB-201ENST00000342835 A8MUN3 132 aa11.77□□□□□ -0.52
SPTB-201ENST00000342835 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.52
SPTB-201ENST00000342835 RPL37P61927 97 aaKnown RBP11.74□□□□□ -0.53
SPTB-201ENST00000342835 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
SPTB-201ENST00000342835 SPINK7P58062 85 aa11.72□□□□□ -0.53
SPTB-201ENST00000342835 XP32Q5T750 250 aa11.72□□□□□ -0.53
SPTB-201ENST00000342835 LINC01558Q9Y6Z2 57 aa11.65□□□□□ -0.54
SPTB-201ENST00000342835 TPRXLQ17RH7 258 aa11.64□□□□□ -0.55
SPTB-201ENST00000342835 PSPHP1O15172 72 aa11.62□□□□□ -0.55
SPTB-201ENST00000342835 MYCBP2O75592 4640 aa11.6□□□□□ -0.55
SPTB-201ENST00000342835 PRR15LQ9BU68 103 aa11.59□□□□□ -0.55
SPTB-201ENST00000342835 J3QL48 77 aa11.53□□□□□ -0.56
SPTB-201ENST00000342835 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
SPTB-201ENST00000342835 Q5VV11 94 aa11.52□□□□□ -0.56
SPTB-201ENST00000342835 COX6B2Q6YFQ2 88 aa11.51□□□□□ -0.57
SPTB-201ENST00000342835 BRK1Q8WUW1 75 aa11.43□□□□□ -0.58
SPTB-201ENST00000342835 KRTAP3-1Q9BYR8 98 aa11.43□□□□□ -0.58
SPTB-201ENST00000342835 HERC1Q15751 4861 aa11.42□□□□□ -0.58
SPTB-201ENST00000342835 A0A1B0GU69 56 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms