RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
H1F0-201ENST00000340857 PSORS1C2Q9UIG4 136 aa9.75□□□□□ -0.85
H1F0-201ENST00000340857 A0A1B0GVX0 72 aa9.73□□□□□ -0.85
H1F0-201ENST00000340857 Q5VV11 94 aa9.73□□□□□ -0.85
H1F0-201ENST00000340857 PKD1P98161 4303 aa9.73□□□□□ -0.85
H1F0-201ENST00000340857 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
H1F0-201ENST00000340857 DNAH8Q96JB1 4490 aa9.73□□□□□ -0.85
H1F0-201ENST00000340857 PLAC8Q9NZF1 115 aa9.72□□□□□ -0.85
H1F0-201ENST00000340857 PCOTHQ58A44 107 aa9.72□□□□□ -0.85
H1F0-201ENST00000340857 COA5Q86WW8 74 aa9.72□□□□□ -0.85
H1F0-201ENST00000340857 ANAPC11Q9NYG5 84 aa9.72□□□□□ -0.85
H1F0-201ENST00000340857 LIMD2Q9BT23 127 aa9.71□□□□□ -0.85
H1F0-201ENST00000340857 ZNF861PO60384 105 aa9.71□□□□□ -0.86
H1F0-201ENST00000340857 CD164Q04900 197 aa9.71□□□□□ -0.86
H1F0-201ENST00000340857 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
H1F0-201ENST00000340857 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
H1F0-201ENST00000340857 PKHD1P08F94 4074 aa9.69□□□□□ -0.86
H1F0-201ENST00000340857 NDUFS5O43920 106 aa9.68□□□□□ -0.86
H1F0-201ENST00000340857 MRPL34Q9BQ48 92 aaKnown RBP9.67□□□□□ -0.86
H1F0-201ENST00000340857 A0A087X002 238 aa9.66□□□□□ -0.86
H1F0-201ENST00000340857 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
H1F0-201ENST00000340857 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
H1F0-201ENST00000340857 PRR15LQ9BU68 103 aa9.65□□□□□ -0.87
H1F0-201ENST00000340857 A8MU10 97 aa9.62□□□□□ -0.87
H1F0-201ENST00000340857 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
H1F0-201ENST00000340857 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
H1F0-201ENST00000340857 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
H1F0-201ENST00000340857 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
H1F0-201ENST00000340857 Q75L30 129 aa9.58□□□□□ -0.88
H1F0-201ENST00000340857 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
H1F0-201ENST00000340857 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
H1F0-201ENST00000340857 HRES1P13985 223 aa9.55□□□□□ -0.88
H1F0-201ENST00000340857 Q5W150 140 aa9.54□□□□□ -0.88
H1F0-201ENST00000340857 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
H1F0-201ENST00000340857 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
H1F0-201ENST00000340857 EPPK1P58107 5090 aaKnown RBP9.53□□□□□ -0.88
H1F0-201ENST00000340857 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
H1F0-201ENST00000340857 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
H1F0-201ENST00000340857 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
H1F0-201ENST00000340857 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
H1F0-201ENST00000340857 KRTAP10-1P60331 282 aa9.51□□□□□ -0.89
H1F0-201ENST00000340857 LCA10Q71F78 164 aa9.5□□□□□ -0.89
H1F0-201ENST00000340857 A6NED7 52 aa9.49□□□□□ -0.89
H1F0-201ENST00000340857 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
H1F0-201ENST00000340857 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
H1F0-201ENST00000340857 APOBP04114 4563 aaKnown RBP9.42□□□□□ -0.9
H1F0-201ENST00000340857 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
H1F0-201ENST00000340857 Q6ZSA8 131 aa9.42□□□□□ -0.9
H1F0-201ENST00000340857 CDC42SE1Q9NRR8 79 aa9.42□□□□□ -0.9
H1F0-201ENST00000340857 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
H1F0-201ENST00000340857 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
H1F0-201ENST00000340857 LINC00313P59037 77 aa9.38□□□□□ -0.91
H1F0-201ENST00000340857 ACYP2P14621 99 aa9.36□□□□□ -0.91
H1F0-201ENST00000340857 SPINK7P58062 85 aa9.36□□□□□ -0.91
H1F0-201ENST00000340857 KRTAP13-2Q52LG2 175 aa9.36□□□□□ -0.91
H1F0-201ENST00000340857 SEC61GP60059 68 aa9.34□□□□□ -0.91
H1F0-201ENST00000340857 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
H1F0-201ENST00000340857 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
H1F0-201ENST00000340857 FAT1Q14517 4588 aa9.31□□□□□ -0.92
H1F0-201ENST00000340857 KIAA1109Q2LD37 5005 aa9.31□□□□□ -0.92
H1F0-201ENST00000340857 A6NN06 94 aa9.31□□□□□ -0.92
H1F0-201ENST00000340857 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
H1F0-201ENST00000340857 HSPG2P98160 4391 aa9.3□□□□□ -0.92
H1F0-201ENST00000340857 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
H1F0-201ENST00000340857 IGKV2-30P06310 120 aa9.29□□□□□ -0.92
H1F0-201ENST00000340857 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
H1F0-201ENST00000340857 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
H1F0-201ENST00000340857 RYR1P21817 5038 aa9.27□□□□□ -0.93
H1F0-201ENST00000340857 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
H1F0-201ENST00000340857 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
H1F0-201ENST00000340857 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.93
H1F0-201ENST00000340857 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
H1F0-201ENST00000340857 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
H1F0-201ENST00000340857 PLA2G1BP04054 148 aaKnown RBP9.17□□□□□ -0.94
H1F0-201ENST00000340857 TYMSOSQ8TAI1 123 aa9.16□□□□□ -0.94
H1F0-201ENST00000340857 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.95
H1F0-201ENST00000340857 A0A1B0GU69 56 aa9.14□□□□□ -0.95
H1F0-201ENST00000340857 SPINK1P00995 79 aa9.13□□□□□ -0.95
H1F0-201ENST00000340857 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
H1F0-201ENST00000340857 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
H1F0-201ENST00000340857 RBM12B-AS1Q9P1G2 102 aa9.09□□□□□ -0.95
H1F0-201ENST00000340857 Q5VSD8 79 aa9.06□□□□□ -0.96
H1F0-201ENST00000340857 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
H1F0-201ENST00000340857 Q8N1X5 172 aa9.04□□□□□ -0.96
H1F0-201ENST00000340857 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
H1F0-201ENST00000340857 HERC2O95714 4834 aa9.03□□□□□ -0.96
H1F0-201ENST00000340857 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
H1F0-201ENST00000340857 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
H1F0-201ENST00000340857 UQCR11O14957 56 aa8.99□□□□□ -0.97
H1F0-201ENST00000340857 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
H1F0-201ENST00000340857 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
H1F0-201ENST00000340857 PKHD1L1Q86WI1 4243 aa8.94□□□□□ -0.98
H1F0-201ENST00000340857 MYCBP2O75592 4640 aa8.94□□□□□ -0.98
H1F0-201ENST00000340857 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
H1F0-201ENST00000340857 FLG2Q5D862 2391 aaPredicted RBP8.91□□□□□ -0.98
H1F0-201ENST00000340857 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
H1F0-201ENST00000340857 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
H1F0-201ENST00000340857 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
H1F0-201ENST00000340857 C9orf92A6NGG3 77 aa8.83□□□□□ -1
H1F0-201ENST00000340857 A8MUU9 505 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms