RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
BRCC3-202ENST00000340647 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
BRCC3-202ENST00000340647 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
BRCC3-202ENST00000340647 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
BRCC3-202ENST00000340647 Q6ZQT0 140 aa8.51□□□□□ -1.05
BRCC3-202ENST00000340647 C9JAW5 83 aa8.49□□□□□ -1.05
BRCC3-202ENST00000340647 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
BRCC3-202ENST00000340647 LCE2BO14633 110 aa8.47□□□□□ -1.05
BRCC3-202ENST00000340647 MT2AP02795 61 aa8.47□□□□□ -1.05
BRCC3-202ENST00000340647 FCGBPQ9Y6R7 5405 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-202ENST00000340647 LOC110117498A0A087WWA1 95 aa8.44□□□□□ -1.06
BRCC3-202ENST00000340647 M0R143 59 aa8.44□□□□□ -1.06
BRCC3-202ENST00000340647 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
BRCC3-202ENST00000340647 Q8N9P0 234 aaPredicted RBP8.43□□□□□ -1.06
BRCC3-202ENST00000340647 J3KT08 172 aa8.42□□□□□ -1.06
BRCC3-202ENST00000340647 MT1FP04733 61 aa8.42□□□□□ -1.06
BRCC3-202ENST00000340647 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
BRCC3-202ENST00000340647 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.06
BRCC3-202ENST00000340647 JMJD7-PLA2G4BH0Y9G9 81 aa8.4□□□□□ -1.06
BRCC3-202ENST00000340647 SMIM6P0DI80 62 aa8.4□□□□□ -1.06
BRCC3-202ENST00000340647 FAM236CP0DP71 79 aa8.4□□□□□ -1.06
BRCC3-202ENST00000340647 IGKV3D-7A0A0C4DH55 119 aa8.39□□□□□ -1.07
BRCC3-202ENST00000340647 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
BRCC3-202ENST00000340647 A8MWP4 228 aa8.38□□□□□ -1.07
BRCC3-202ENST00000340647 C21orf62-AS1Q17RA5 79 aa8.38□□□□□ -1.07
BRCC3-202ENST00000340647 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
BRCC3-202ENST00000340647 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
BRCC3-202ENST00000340647 SPINK7P58062 85 aa8.37□□□□□ -1.07
BRCC3-202ENST00000340647 A0A1B0GW54 56 aa8.36□□□□□ -1.07
BRCC3-202ENST00000340647 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
BRCC3-202ENST00000340647 PDE6GP18545 87 aa8.33□□□□□ -1.08
BRCC3-202ENST00000340647 NDUFB1O75438 58 aa8.32□□□□□ -1.08
BRCC3-202ENST00000340647 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
BRCC3-202ENST00000340647 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
BRCC3-202ENST00000340647 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 LOC105371267A0A1B0GV96 52 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 BATFQ16520 125 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 Q6ZVQ6 151 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
BRCC3-202ENST00000340647 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
BRCC3-202ENST00000340647 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
BRCC3-202ENST00000340647 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
BRCC3-202ENST00000340647 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
BRCC3-202ENST00000340647 NREPQ16612 68 aa8.25□□□□□ -1.09
BRCC3-202ENST00000340647 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
BRCC3-202ENST00000340647 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
BRCC3-202ENST00000340647 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
BRCC3-202ENST00000340647 K7EQZ3 153 aa8.23□□□□□ -1.09
BRCC3-202ENST00000340647 H3BT86 120 aa8.22□□□□□ -1.09
BRCC3-202ENST00000340647 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
BRCC3-202ENST00000340647 MRPL34Q9BQ48 92 aaKnown RBP8.22□□□□□ -1.09
BRCC3-202ENST00000340647 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
BRCC3-202ENST00000340647 SYNE2Q8WXH0 6885 aaKnown RBP8.16□□□□□ -1.1
BRCC3-202ENST00000340647 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
BRCC3-202ENST00000340647 Q5W150 140 aa8.16□□□□□ -1.1
BRCC3-202ENST00000340647 Q8N9L7 120 aa8.11□□□□□ -1.11
BRCC3-202ENST00000340647 BPY2O14599 106 aa8.1□□□□□ -1.11
BRCC3-202ENST00000340647 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
BRCC3-202ENST00000340647 NDUFS5O43920 106 aa8.07□□□□□ -1.12
BRCC3-202ENST00000340647 SPCS1Q9Y6A9 102 aa8.07□□□□□ -1.12
BRCC3-202ENST00000340647 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
BRCC3-202ENST00000340647 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
BRCC3-202ENST00000340647 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
BRCC3-202ENST00000340647 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
BRCC3-202ENST00000340647 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
BRCC3-202ENST00000340647 CASC2Q6XLA1 102 aa8.01□□□□□ -1.13
BRCC3-202ENST00000340647 HCG22E2RYF7 251 aa8□□□□□ -1.13
BRCC3-202ENST00000340647 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
BRCC3-202ENST00000340647 K7EP34 96 aa7.95□□□□□ -1.14
BRCC3-202ENST00000340647 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
BRCC3-202ENST00000340647 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
BRCC3-202ENST00000340647 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
BRCC3-202ENST00000340647 CXCL6P80162 114 aa7.91□□□□□ -1.14
BRCC3-202ENST00000340647 KRTAP6-3Q3LI67 103 aa7.9□□□□□ -1.14
BRCC3-202ENST00000340647 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
BRCC3-202ENST00000340647 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
BRCC3-202ENST00000340647 C5orf47Q569G3 176 aa7.79□□□□□ -1.16
BRCC3-202ENST00000340647 F8W1H4 67 aa7.76□□□□□ -1.17
BRCC3-202ENST00000340647 C1orf64Q8NEQ6 169 aa7.76□□□□□ -1.17
BRCC3-202ENST00000340647 LCA10Q71F78 164 aa7.75□□□□□ -1.17
BRCC3-202ENST00000340647 GTF2H5Q6ZYL4 71 aa7.74□□□□□ -1.17
BRCC3-202ENST00000340647 MT1BP07438 61 aa7.73□□□□□ -1.17
BRCC3-202ENST00000340647 S4R3F8 94 aa7.73□□□□□ -1.17
BRCC3-202ENST00000340647 NEBP20929 6669 aa7.72□□□□□ -1.17
BRCC3-202ENST00000340647 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
BRCC3-202ENST00000340647 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
BRCC3-202ENST00000340647 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
BRCC3-202ENST00000340647 A0A087WVE0 104 aa7.68□□□□□ -1.18
BRCC3-202ENST00000340647 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
BRCC3-202ENST00000340647 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
BRCC3-202ENST00000340647 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
BRCC3-202ENST00000340647 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
BRCC3-202ENST00000340647 FAM236AA0A1B0GUQ0 79 aa7.63□□□□□ -1.19
BRCC3-202ENST00000340647 FAM236BA0A1B0GV22 79 aa7.63□□□□□ -1.19
BRCC3-202ENST00000340647 TRAV22A0A0B4J277 110 aa7.57□□□□□ -1.2
BRCC3-202ENST00000340647 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
BRCC3-202ENST00000340647 Q5VV11 94 aa7.56□□□□□ -1.2
BRCC3-202ENST00000340647 FAM240AA0A1B0GVK7 77 aa7.54□□□□□ -1.2
BRCC3-202ENST00000340647 ACYP1P07311 99 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms