RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 DCHS1Q96JQ0 3298 aa4.55□□□□□ -1.68
HIPK1-201ENST00000340480 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
HIPK1-201ENST00000340480 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
HIPK1-201ENST00000340480 LCA10Q71F78 164 aa4.54□□□□□ -1.68
HIPK1-201ENST00000340480 DMDP11532 3685 aa4.54□□□□□ -1.68
HIPK1-201ENST00000340480 KRTAP10-2P60368 255 aa4.54□□□□□ -1.68
HIPK1-201ENST00000340480 KRTAP29-1A8MX34 341 aaPredicted RBP4.53□□□□□ -1.68
HIPK1-201ENST00000340480 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
HIPK1-201ENST00000340480 Q5XG85 94 aa4.52□□□□□ -1.69
HIPK1-201ENST00000340480 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
HIPK1-201ENST00000340480 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
HIPK1-201ENST00000340480 RELNP78509 3460 aa4.51□□□□□ -1.69
HIPK1-201ENST00000340480 WDFY3Q8IZQ1 3526 aa4.51□□□□□ -1.69
HIPK1-201ENST00000340480 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
HIPK1-201ENST00000340480 TENM3Q9P273 2699 aa4.5□□□□□ -1.69
HIPK1-201ENST00000340480 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
HIPK1-201ENST00000340480 SPINK7P58062 85 aa4.49□□□□□ -1.69
HIPK1-201ENST00000340480 ZFHX4Q86UP3 3567 aa4.47□□□□□ -1.69
HIPK1-201ENST00000340480 LAMA5O15230 3695 aa4.47□□□□□ -1.69
HIPK1-201ENST00000340480 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
HIPK1-201ENST00000340480 M0QZ58 72 aa4.46□□□□□ -1.7
HIPK1-201ENST00000340480 VWFP04275 2813 aa4.43□□□□□ -1.7
HIPK1-201ENST00000340480 H1FX-AS1Q4G0G2 97 aa4.42□□□□□ -1.7
HIPK1-201ENST00000340480 Q5W150 140 aa4.42□□□□□ -1.7
HIPK1-201ENST00000340480 A0A087X002 238 aa4.41□□□□□ -1.7
HIPK1-201ENST00000340480 RPL37P61927 97 aaKnown RBP4.4□□□□□ -1.71
HIPK1-201ENST00000340480 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
HIPK1-201ENST00000340480 ASPMQ8IZT6 3477 aa4.39□□□□□ -1.71
HIPK1-201ENST00000340480 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
HIPK1-201ENST00000340480 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
HIPK1-201ENST00000340480 KRTAP13-2Q52LG2 175 aa4.38□□□□□ -1.71
HIPK1-201ENST00000340480 BSNQ9UPA5 3926 aa4.38□□□□□ -1.71
HIPK1-201ENST00000340480 Q75L30 129 aa4.37□□□□□ -1.71
HIPK1-201ENST00000340480 CELSR1Q9NYQ6 3014 aa4.35□□□□□ -1.71
HIPK1-201ENST00000340480 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
HIPK1-201ENST00000340480 ROMO1P60602 79 aa4.34□□□□□ -1.71
HIPK1-201ENST00000340480 H3BS24 57 aa4.31□□□□□ -1.72
HIPK1-201ENST00000340480 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
HIPK1-201ENST00000340480 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
HIPK1-201ENST00000340480 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
HIPK1-201ENST00000340480 SPENQ96T58 3664 aaKnown RBP4.27□□□□□ -1.73
HIPK1-201ENST00000340480 Q5VV11 94 aa4.27□□□□□ -1.73
HIPK1-201ENST00000340480 C20orf166-AS1Q96NR2 134 aa4.26□□□□□ -1.73
HIPK1-201ENST00000340480 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
HIPK1-201ENST00000340480 A8MUU9 505 aa4.24□□□□□ -1.73
HIPK1-201ENST00000340480 DMBT1Q9UGM3 2413 aaPredicted RBP4.23□□□□□ -1.73
HIPK1-201ENST00000340480 PKD1L1Q8TDX9 2849 aa4.21□□□□□ -1.74
HIPK1-201ENST00000340480 A0A1B0GVY2 172 aa4.21□□□□□ -1.74
HIPK1-201ENST00000340480 TGP01266 2768 aa4.2□□□□□ -1.74
HIPK1-201ENST00000340480 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
HIPK1-201ENST00000340480 TNP1P09430 55 aa4.19□□□□□ -1.74
HIPK1-201ENST00000340480 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
HIPK1-201ENST00000340480 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
HIPK1-201ENST00000340480 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.74
HIPK1-201ENST00000340480 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.75
HIPK1-201ENST00000340480 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
HIPK1-201ENST00000340480 SVEP1Q4LDE5 3571 aa4.14□□□□□ -1.75
HIPK1-201ENST00000340480 KRTAP13-3Q3SY46 172 aa4.13□□□□□ -1.75
HIPK1-201ENST00000340480 FBN3Q75N90 2809 aa4.13□□□□□ -1.75
HIPK1-201ENST00000340480 CSMD2Q7Z408 3487 aa4.1□□□□□ -1.75
HIPK1-201ENST00000340480 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
HIPK1-201ENST00000340480 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
HIPK1-201ENST00000340480 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
HIPK1-201ENST00000340480 TRRAPQ9Y4A5 3859 aa4.08□□□□□ -1.76
HIPK1-201ENST00000340480 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
HIPK1-201ENST00000340480 MEGF8Q7Z7M0 2845 aa4.07□□□□□ -1.76
HIPK1-201ENST00000340480 XP32Q5T750 250 aa4.06□□□□□ -1.76
HIPK1-201ENST00000340480 ZFHX3Q15911 3703 aa4.06□□□□□ -1.76
HIPK1-201ENST00000340480 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
HIPK1-201ENST00000340480 HUWE1Q7Z6Z7 4374 aaKnown RBP4.03□□□□□ -1.76
HIPK1-201ENST00000340480 AKAP9Q99996 3911 aa4.02□□□□□ -1.77
HIPK1-201ENST00000340480 KRTAP10-10P60014 251 aa4□□□□□ -1.77
HIPK1-201ENST00000340480 A6NN06 94 aa4□□□□□ -1.77
HIPK1-201ENST00000340480 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
HIPK1-201ENST00000340480 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
HIPK1-201ENST00000340480 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
HIPK1-201ENST00000340480 A8MU10 97 aa3.97□□□□□ -1.77
HIPK1-201ENST00000340480 CUBNO60494 3623 aa3.96□□□□□ -1.78
HIPK1-201ENST00000340480 DNAH9Q9NYC9 4486 aa3.96□□□□□ -1.78
HIPK1-201ENST00000340480 P0C880 135 aa3.95□□□□□ -1.78
HIPK1-201ENST00000340480 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
HIPK1-201ENST00000340480 ALMS1Q8TCU4 4167 aa3.93□□□□□ -1.78
HIPK1-201ENST00000340480 VPS13CQ709C8 3753 aa3.92□□□□□ -1.78
HIPK1-201ENST00000340480 PLECQ15149 4684 aaKnown RBP3.87□□□□□ -1.79
HIPK1-201ENST00000340480 SRRM2Q9UQ35 2752 aaKnown RBP3.87□□□□□ -1.79
HIPK1-201ENST00000340480 VPS13DQ5THJ4 4388 aa3.86□□□□□ -1.79
HIPK1-201ENST00000340480 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
HIPK1-201ENST00000340480 H0YAA0 97 aa3.83□□□□□ -1.8
HIPK1-201ENST00000340480 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
HIPK1-201ENST00000340480 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
HIPK1-201ENST00000340480 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
HIPK1-201ENST00000340480 ANK2Q01484 3957 aa3.81□□□□□ -1.8
HIPK1-201ENST00000340480 KRTAP3-1Q9BYR8 98 aa3.81□□□□□ -1.8
HIPK1-201ENST00000340480 DNAH3Q8TD57 4116 aa3.8□□□□□ -1.8
HIPK1-201ENST00000340480 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
HIPK1-201ENST00000340480 DNAH11Q96DT5 4516 aa3.78□□□□□ -1.8
HIPK1-201ENST00000340480 COL7A1Q02388 2944 aa3.78□□□□□ -1.81
HIPK1-201ENST00000340480 DNAH1Q9P2D7 4330 aa3.77□□□□□ -1.81
HIPK1-201ENST00000340480 DNAH5Q8TE73 4624 aa3.77□□□□□ -1.81
HIPK1-201ENST00000340480 STARD9Q9P2P6 4700 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 393.7 ms