RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 CSMD2Q7Z408 3487 aa6.22□□□□□ -1.41
SEC24C-201ENST00000339365 ANK3Q12955 4377 aaKnown RBP6.22□□□□□ -1.41
SEC24C-201ENST00000339365 C4orf26Q17RF5 130 aa6.21□□□□□ -1.41
SEC24C-201ENST00000339365 Q5XG85 94 aa6.2□□□□□ -1.42
SEC24C-201ENST00000339365 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
SEC24C-201ENST00000339365 A8MUN3 132 aa6.18□□□□□ -1.42
SEC24C-201ENST00000339365 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
SEC24C-201ENST00000339365 COA5Q86WW8 74 aa6.16□□□□□ -1.42
SEC24C-201ENST00000339365 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
SEC24C-201ENST00000339365 OCR1Q9BZK8 76 aa6.15□□□□□ -1.43
SEC24C-201ENST00000339365 Q5W150 140 aa6.14□□□□□ -1.43
SEC24C-201ENST00000339365 PSPHP1O15172 72 aa6.14□□□□□ -1.43
SEC24C-201ENST00000339365 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
SEC24C-201ENST00000339365 HRES1P13985 223 aa6.13□□□□□ -1.43
SEC24C-201ENST00000339365 SPENQ96T58 3664 aaKnown RBP6.13□□□□□ -1.43
SEC24C-201ENST00000339365 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
SEC24C-201ENST00000339365 BSNQ9UPA5 3926 aa6.12□□□□□ -1.43
SEC24C-201ENST00000339365 KRTAP29-1A8MX34 341 aaPredicted RBP6.11□□□□□ -1.43
SEC24C-201ENST00000339365 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
SEC24C-201ENST00000339365 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
SEC24C-201ENST00000339365 Q75L30 129 aa6.09□□□□□ -1.43
SEC24C-201ENST00000339365 S4R3F8 94 aa6.09□□□□□ -1.43
SEC24C-201ENST00000339365 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.43
SEC24C-201ENST00000339365 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
SEC24C-201ENST00000339365 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
SEC24C-201ENST00000339365 TRRAPQ9Y4A5 3859 aa6.03□□□□□ -1.44
SEC24C-201ENST00000339365 UQCR11O14957 56 aa6.02□□□□□ -1.45
SEC24C-201ENST00000339365 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
SEC24C-201ENST00000339365 H7BZZ5 65 aa6.02□□□□□ -1.45
SEC24C-201ENST00000339365 TPRXLQ17RH7 258 aa6□□□□□ -1.45
SEC24C-201ENST00000339365 KRTAP10-8P60410 259 aa6□□□□□ -1.45
SEC24C-201ENST00000339365 SVIPQ8NHG7 77 aa5.99□□□□□ -1.45
SEC24C-201ENST00000339365 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
SEC24C-201ENST00000339365 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
SEC24C-201ENST00000339365 A8MUU9 505 aa5.94□□□□□ -1.46
SEC24C-201ENST00000339365 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
SEC24C-201ENST00000339365 XP32Q5T750 250 aa5.93□□□□□ -1.46
SEC24C-201ENST00000339365 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
SEC24C-201ENST00000339365 R4GN34 69 aa5.93□□□□□ -1.46
SEC24C-201ENST00000339365 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
SEC24C-201ENST00000339365 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
SEC24C-201ENST00000339365 A0A0D9SG42 100 aa5.91□□□□□ -1.46
SEC24C-201ENST00000339365 SVEP1Q4LDE5 3571 aa5.91□□□□□ -1.46
SEC24C-201ENST00000339365 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.46
SEC24C-201ENST00000339365 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
SEC24C-201ENST00000339365 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
SEC24C-201ENST00000339365 A0A1B0GU33 70 aa5.87□□□□□ -1.47
SEC24C-201ENST00000339365 KRTAP13-3Q3SY46 172 aa5.86□□□□□ -1.47
SEC24C-201ENST00000339365 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
SEC24C-201ENST00000339365 LCA10Q71F78 164 aa5.81□□□□□ -1.48
SEC24C-201ENST00000339365 M0QZ58 72 aa5.79□□□□□ -1.48
SEC24C-201ENST00000339365 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
SEC24C-201ENST00000339365 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
SEC24C-201ENST00000339365 AKAP9Q99996 3911 aa5.75□□□□□ -1.49
SEC24C-201ENST00000339365 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
SEC24C-201ENST00000339365 DNHD1Q96M86 4753 aa5.74□□□□□ -1.49
SEC24C-201ENST00000339365 CUBNO60494 3623 aa5.74□□□□□ -1.49
SEC24C-201ENST00000339365 ZNF469Q96JG9 3925 aaPredicted RBP5.74□□□□□ -1.49
SEC24C-201ENST00000339365 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.49
SEC24C-201ENST00000339365 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.49
SEC24C-201ENST00000339365 HUWE1Q7Z6Z7 4374 aaKnown RBP5.68□□□□□ -1.5
SEC24C-201ENST00000339365 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
SEC24C-201ENST00000339365 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
SEC24C-201ENST00000339365 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
SEC24C-201ENST00000339365 Q1T7F1 81 aa5.66□□□□□ -1.5
SEC24C-201ENST00000339365 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
SEC24C-201ENST00000339365 CYSTM1Q9H1C7 97 aa5.62□□□□□ -1.51
SEC24C-201ENST00000339365 KRTAP10-4P60372 401 aaPredicted RBP5.61□□□□□ -1.51
SEC24C-201ENST00000339365 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.51
SEC24C-201ENST00000339365 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
SEC24C-201ENST00000339365 VPS13CQ709C8 3753 aa5.54□□□□□ -1.52
SEC24C-201ENST00000339365 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
SEC24C-201ENST00000339365 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
SEC24C-201ENST00000339365 Q5VV11 94 aa5.46□□□□□ -1.54
SEC24C-201ENST00000339365 PLECQ15149 4684 aaKnown RBP5.37□□□□□ -1.55
SEC24C-201ENST00000339365 ROMO1P60602 79 aa5.35□□□□□ -1.55
SEC24C-201ENST00000339365 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
SEC24C-201ENST00000339365 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
SEC24C-201ENST00000339365 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
SEC24C-201ENST00000339365 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
SEC24C-201ENST00000339365 A8MU10 97 aa5.33□□□□□ -1.56
SEC24C-201ENST00000339365 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
SEC24C-201ENST00000339365 ANK2Q01484 3957 aa5.32□□□□□ -1.56
SEC24C-201ENST00000339365 TNP1P09430 55 aa5.3□□□□□ -1.56
SEC24C-201ENST00000339365 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
SEC24C-201ENST00000339365 VPS13DQ5THJ4 4388 aa5.27□□□□□ -1.57
SEC24C-201ENST00000339365 DNAH10Q8IVF4 4471 aa5.25□□□□□ -1.57
SEC24C-201ENST00000339365 P0C880 135 aa5.25□□□□□ -1.57
SEC24C-201ENST00000339365 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
SEC24C-201ENST00000339365 DYNC1H1Q14204 4646 aaKnown RBP5.22□□□□□ -1.57
SEC24C-201ENST00000339365 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
SEC24C-201ENST00000339365 H0YAA0 97 aa5.2□□□□□ -1.58
SEC24C-201ENST00000339365 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
SEC24C-201ENST00000339365 RYR1P21817 5038 aa5.16□□□□□ -1.58
SEC24C-201ENST00000339365 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
SEC24C-201ENST00000339365 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
SEC24C-201ENST00000339365 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
SEC24C-201ENST00000339365 FAT1Q14517 4588 aa5.11□□□□□ -1.59
SEC24C-201ENST00000339365 DNAH17Q9UFH2 4485 aa5.11□□□□□ -1.59
SEC24C-201ENST00000339365 RYR3Q15413 4870 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms