RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 FLGP20930 4061 aaPredicted RBP10.06□□□□□ -0.8
ITGA4-202ENST00000339307 A0A1B0GV72 72 aa10.05□□□□□ -0.8
ITGA4-202ENST00000339307 LOC110117498A0A087WWA1 95 aa10.04□□□□□ -0.8
ITGA4-202ENST00000339307 A0A1B0GW54 56 aa10.04□□□□□ -0.8
ITGA4-202ENST00000339307 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
ITGA4-202ENST00000339307 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
ITGA4-202ENST00000339307 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
ITGA4-202ENST00000339307 DSCR10P59022 87 aa10□□□□□ -0.81
ITGA4-202ENST00000339307 Q6ZQT0 140 aa9.99□□□□□ -0.81
ITGA4-202ENST00000339307 MTURNQ8N3F0 131 aa9.99□□□□□ -0.81
ITGA4-202ENST00000339307 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
ITGA4-202ENST00000339307 A8MUU9 505 aa9.99□□□□□ -0.81
ITGA4-202ENST00000339307 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
ITGA4-202ENST00000339307 F8W1H4 67 aa9.97□□□□□ -0.81
ITGA4-202ENST00000339307 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
ITGA4-202ENST00000339307 VPS25Q9BRG1 176 aa9.97□□□□□ -0.81
ITGA4-202ENST00000339307 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
ITGA4-202ENST00000339307 IGKV4-1P06312 121 aa9.91□□□□□ -0.82
ITGA4-202ENST00000339307 LINC00313P59037 77 aa9.91□□□□□ -0.82
ITGA4-202ENST00000339307 FAM236DA0A1B0GTK5 79 aa9.9□□□□□ -0.83
ITGA4-202ENST00000339307 FAM236CP0DP71 79 aa9.9□□□□□ -0.83
ITGA4-202ENST00000339307 LINC00472Q9H8W2 130 aa9.88□□□□□ -0.83
ITGA4-202ENST00000339307 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
ITGA4-202ENST00000339307 J3KT08 172 aa9.83□□□□□ -0.84
ITGA4-202ENST00000339307 KRTAP9-8Q9BYQ0 159 aa9.82□□□□□ -0.84
ITGA4-202ENST00000339307 IGHV6-1A0A0B4J1U7 121 aa9.82□□□□□ -0.84
ITGA4-202ENST00000339307 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
ITGA4-202ENST00000339307 NOTCH2NLQ7Z3S9 236 aa9.81□□□□□ -0.84
ITGA4-202ENST00000339307 ETDBQ3ZM63 59 aa9.8□□□□□ -0.84
ITGA4-202ENST00000339307 A0A1B0GV90 55 aa9.79□□□□□ -0.84
ITGA4-202ENST00000339307 NREPQ16612 68 aa9.79□□□□□ -0.84
ITGA4-202ENST00000339307 RBM12B-AS1Q9P1G2 102 aa9.79□□□□□ -0.84
ITGA4-202ENST00000339307 NDUFB1O75438 58 aa9.73□□□□□ -0.85
ITGA4-202ENST00000339307 HRES1P13985 223 aa9.71□□□□□ -0.86
ITGA4-202ENST00000339307 A0A1B0GVX0 72 aa9.7□□□□□ -0.86
ITGA4-202ENST00000339307 A8MWP4 228 aa9.69□□□□□ -0.86
ITGA4-202ENST00000339307 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
ITGA4-202ENST00000339307 MT2AP02795 61 aa9.68□□□□□ -0.86
ITGA4-202ENST00000339307 UBL5Q9BZL1 73 aa9.68□□□□□ -0.86
ITGA4-202ENST00000339307 Q6ZVQ6 151 aa9.67□□□□□ -0.86
ITGA4-202ENST00000339307 USH2AO75445 5202 aa9.67□□□□□ -0.86
ITGA4-202ENST00000339307 LINC00846Q9NV44 126 aa9.66□□□□□ -0.86
ITGA4-202ENST00000339307 ACYP1P07311 99 aa9.65□□□□□ -0.86
ITGA4-202ENST00000339307 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
ITGA4-202ENST00000339307 BPY2O14599 106 aa9.65□□□□□ -0.87
ITGA4-202ENST00000339307 KRTAP10-10P60014 251 aa9.64□□□□□ -0.87
ITGA4-202ENST00000339307 SSPOA2VEC9 5147 aa9.63□□□□□ -0.87
ITGA4-202ENST00000339307 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
ITGA4-202ENST00000339307 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
ITGA4-202ENST00000339307 PRR15Q8IV56 129 aa9.62□□□□□ -0.87
ITGA4-202ENST00000339307 IGKV3D-7A0A0C4DH55 119 aa9.61□□□□□ -0.87
ITGA4-202ENST00000339307 MT1FP04733 61 aa9.61□□□□□ -0.87
ITGA4-202ENST00000339307 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
ITGA4-202ENST00000339307 KRTAP9-7A8MTY7 169 aa9.59□□□□□ -0.87
ITGA4-202ENST00000339307 SPINK7P58062 85 aa9.57□□□□□ -0.88
ITGA4-202ENST00000339307 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
ITGA4-202ENST00000339307 LCE2BO14633 110 aa9.54□□□□□ -0.88
ITGA4-202ENST00000339307 K7EQZ3 153 aa9.53□□□□□ -0.88
ITGA4-202ENST00000339307 CXCL6P80162 114 aa9.53□□□□□ -0.88
ITGA4-202ENST00000339307 J3QR89 54 aa9.51□□□□□ -0.89
ITGA4-202ENST00000339307 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
ITGA4-202ENST00000339307 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
ITGA4-202ENST00000339307 Q8N9P0 234 aaPredicted RBP9.49□□□□□ -0.89
ITGA4-202ENST00000339307 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
ITGA4-202ENST00000339307 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
ITGA4-202ENST00000339307 hDV103S1A0JD37 113 aa9.47□□□□□ -0.89
ITGA4-202ENST00000339307 WFDC13Q8IUB5 93 aa9.47□□□□□ -0.89
ITGA4-202ENST00000339307 ATP5EP2Q5VTU8 51 aa9.46□□□□□ -0.9
ITGA4-202ENST00000339307 MRPL34Q9BQ48 92 aaKnown RBP9.45□□□□□ -0.9
ITGA4-202ENST00000339307 FCGBPQ9Y6R7 5405 aaPredicted RBP9.44□□□□□ -0.9
ITGA4-202ENST00000339307 Q8N9L7 120 aa9.43□□□□□ -0.9
ITGA4-202ENST00000339307 LINC00643Q86TS7 51 aa9.4□□□□□ -0.9
ITGA4-202ENST00000339307 CASC2Q6XLA1 102 aa9.39□□□□□ -0.91
ITGA4-202ENST00000339307 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
ITGA4-202ENST00000339307 K7ERU9 68 aa9.32□□□□□ -0.92
ITGA4-202ENST00000339307 NDUFS5O43920 106 aa9.32□□□□□ -0.92
ITGA4-202ENST00000339307 HIST1H4AP62805 103 aaKnown RBP9.26□□□□□ -0.93
ITGA4-202ENST00000339307 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
ITGA4-202ENST00000339307 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
ITGA4-202ENST00000339307 MACF1Q9UPN3 7388 aaKnown RBP9.24□□□□□ -0.93
ITGA4-202ENST00000339307 SYNE2Q8WXH0 6885 aaKnown RBP9.23□□□□□ -0.93
ITGA4-202ENST00000339307 IGKV2D-30A0A075B6S6 120 aa9.22□□□□□ -0.93
ITGA4-202ENST00000339307 IGKV2-30P06310 120 aa9.22□□□□□ -0.93
ITGA4-202ENST00000339307 KRTAP19-6Q3LI70 58 aa9.22□□□□□ -0.93
ITGA4-202ENST00000339307 Q5W150 140 aa9.17□□□□□ -0.94
ITGA4-202ENST00000339307 IMUPQ9GZP8 106 aa9.14□□□□□ -0.95
ITGA4-202ENST00000339307 C7orf65Q6ZTY9 151 aa9.14□□□□□ -0.95
ITGA4-202ENST00000339307 A0A087WVE0 104 aa9.13□□□□□ -0.95
ITGA4-202ENST00000339307 UQCRQO14949 82 aa9.07□□□□□ -0.96
ITGA4-202ENST00000339307 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
ITGA4-202ENST00000339307 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
ITGA4-202ENST00000339307 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
ITGA4-202ENST00000339307 ATOX1O00244 68 aa9.01□□□□□ -0.97
ITGA4-202ENST00000339307 OCR1Q9BZK8 76 aa8.99□□□□□ -0.97
ITGA4-202ENST00000339307 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
ITGA4-202ENST00000339307 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
ITGA4-202ENST00000339307 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
ITGA4-202ENST00000339307 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
ITGA4-202ENST00000339307 SCGB1A1P11684 91 aa8.97□□□□□ -0.97
ITGA4-202ENST00000339307 H0Y9P7 68 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms