RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RYR1P21817 5038 aa6.65□□□□□ -1.34
LRP1-202ENST00000338962 MOBPQ13875 183 aa6.65□□□□□ -1.35
LRP1-202ENST00000338962 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.35
LRP1-202ENST00000338962 HSPG2P98160 4391 aa6.65□□□□□ -1.35
LRP1-202ENST00000338962 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
LRP1-202ENST00000338962 NDUFB1O75438 58 aa6.64□□□□□ -1.35
LRP1-202ENST00000338962 LINC00472Q9H8W2 130 aa6.63□□□□□ -1.35
LRP1-202ENST00000338962 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
LRP1-202ENST00000338962 CYP4F30PQ9H0H9 118 aa6.62□□□□□ -1.35
LRP1-202ENST00000338962 MP68P56378 58 aa6.61□□□□□ -1.35
LRP1-202ENST00000338962 TRAV22A0A0B4J277 110 aa6.61□□□□□ -1.35
LRP1-202ENST00000338962 A8MWP4 228 aa6.6□□□□□ -1.35
LRP1-202ENST00000338962 NDUFS5O43920 106 aa6.6□□□□□ -1.35
LRP1-202ENST00000338962 ZCCHC13Q8WW36 166 aaKnown RBP6.6□□□□□ -1.35
LRP1-202ENST00000338962 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
LRP1-202ENST00000338962 RBM12B-AS1Q9P1G2 102 aa6.59□□□□□ -1.35
LRP1-202ENST00000338962 FAT1Q14517 4588 aa6.59□□□□□ -1.35
LRP1-202ENST00000338962 H3BPC8 53 aa6.58□□□□□ -1.36
LRP1-202ENST00000338962 WFDC13Q8IUB5 93 aa6.58□□□□□ -1.36
LRP1-202ENST00000338962 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
LRP1-202ENST00000338962 Q8N1X5 172 aa6.56□□□□□ -1.36
LRP1-202ENST00000338962 Q96NJ1 140 aa6.55□□□□□ -1.36
LRP1-202ENST00000338962 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
LRP1-202ENST00000338962 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
LRP1-202ENST00000338962 PSPHP1O15172 72 aa6.54□□□□□ -1.36
LRP1-202ENST00000338962 CASC2Q6XLA1 102 aa6.54□□□□□ -1.36
LRP1-202ENST00000338962 ATP11AUNQ6ZP68 121 aa6.54□□□□□ -1.36
LRP1-202ENST00000338962 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
LRP1-202ENST00000338962 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
LRP1-202ENST00000338962 SSBP3-AS1Q7Z2R9 100 aa6.53□□□□□ -1.36
LRP1-202ENST00000338962 KRTAP29-1A8MX34 341 aaPredicted RBP6.52□□□□□ -1.36
LRP1-202ENST00000338962 Q5VV11 94 aa6.52□□□□□ -1.36
LRP1-202ENST00000338962 LIMD2Q9BT23 127 aa6.52□□□□□ -1.36
LRP1-202ENST00000338962 A0A087X002 238 aa6.51□□□□□ -1.37
LRP1-202ENST00000338962 PLA2G1BP04054 148 aaKnown RBP6.51□□□□□ -1.37
LRP1-202ENST00000338962 Q5VSD8 79 aa6.51□□□□□ -1.37
LRP1-202ENST00000338962 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
LRP1-202ENST00000338962 A8MUN3 132 aa6.5□□□□□ -1.37
LRP1-202ENST00000338962 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
LRP1-202ENST00000338962 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
LRP1-202ENST00000338962 H0Y9P7 68 aa6.5□□□□□ -1.37
LRP1-202ENST00000338962 A6NN06 94 aa6.48□□□□□ -1.37
LRP1-202ENST00000338962 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
LRP1-202ENST00000338962 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
LRP1-202ENST00000338962 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
LRP1-202ENST00000338962 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
LRP1-202ENST00000338962 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.38
LRP1-202ENST00000338962 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.38
LRP1-202ENST00000338962 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
LRP1-202ENST00000338962 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
LRP1-202ENST00000338962 Q75L30 129 aa6.45□□□□□ -1.38
LRP1-202ENST00000338962 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
LRP1-202ENST00000338962 PRR4Q16378 134 aa6.44□□□□□ -1.38
LRP1-202ENST00000338962 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
LRP1-202ENST00000338962 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
LRP1-202ENST00000338962 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
LRP1-202ENST00000338962 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
LRP1-202ENST00000338962 LCA10Q71F78 164 aa6.42□□□□□ -1.38
LRP1-202ENST00000338962 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
LRP1-202ENST00000338962 A8MU10 97 aa6.41□□□□□ -1.38
LRP1-202ENST00000338962 TYMSOSQ8TAI1 123 aa6.4□□□□□ -1.39
LRP1-202ENST00000338962 MRPL34Q9BQ48 92 aaKnown RBP6.4□□□□□ -1.39
LRP1-202ENST00000338962 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
LRP1-202ENST00000338962 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
LRP1-202ENST00000338962 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
LRP1-202ENST00000338962 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
LRP1-202ENST00000338962 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
LRP1-202ENST00000338962 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
LRP1-202ENST00000338962 IGLV7-46A0A075B6I9 117 aa6.37□□□□□ -1.39
LRP1-202ENST00000338962 A6NED7 52 aa6.35□□□□□ -1.39
LRP1-202ENST00000338962 SPINK1P00995 79 aa6.35□□□□□ -1.39
LRP1-202ENST00000338962 PRR26Q8N8Z3 221 aa6.34□□□□□ -1.4
LRP1-202ENST00000338962 LINC00313P59037 77 aa6.33□□□□□ -1.4
LRP1-202ENST00000338962 COA5Q86WW8 74 aa6.31□□□□□ -1.4
LRP1-202ENST00000338962 LINC00304Q8N9R0 145 aa6.31□□□□□ -1.4
LRP1-202ENST00000338962 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
LRP1-202ENST00000338962 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
LRP1-202ENST00000338962 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
LRP1-202ENST00000338962 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
LRP1-202ENST00000338962 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
LRP1-202ENST00000338962 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
LRP1-202ENST00000338962 H3BS24 57 aa6.28□□□□□ -1.4
LRP1-202ENST00000338962 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
LRP1-202ENST00000338962 PCOTHQ58A44 107 aa6.28□□□□□ -1.4
LRP1-202ENST00000338962 KRTAP10-8P60410 259 aa6.26□□□□□ -1.41
LRP1-202ENST00000338962 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
LRP1-202ENST00000338962 Q5W150 140 aa6.24□□□□□ -1.41
LRP1-202ENST00000338962 TNXBP22105 4242 aa6.24□□□□□ -1.41
LRP1-202ENST00000338962 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
LRP1-202ENST00000338962 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
LRP1-202ENST00000338962 LINC01554Q52M75 96 aa6.21□□□□□ -1.41
LRP1-202ENST00000338962 J3QL48 77 aa6.18□□□□□ -1.42
LRP1-202ENST00000338962 HRES1P13985 223 aa6.18□□□□□ -1.42
LRP1-202ENST00000338962 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
LRP1-202ENST00000338962 ACYP2P14621 99 aa6.16□□□□□ -1.42
LRP1-202ENST00000338962 HERC1Q15751 4861 aa6.15□□□□□ -1.43
LRP1-202ENST00000338962 SPINK7P58062 85 aa6.13□□□□□ -1.43
LRP1-202ENST00000338962 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
LRP1-202ENST00000338962 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
LRP1-202ENST00000338962 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms