RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 CMC2Q9NRP2 79 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 ABRACLQ9P1F3 81 aa0.11□□□□□ -2.39
XRCC4-202ENST00000338635 PKD1L2Q7Z442 2459 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 ADCY10Q96PN6 1610 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 SYCP2Q9BX26 1530 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 LRP2P98164 4655 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 NF1P21359 2839 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 NOP10Q9NPE3 64 aaKnown RBP0.1□□□□□ -2.39
XRCC4-202ENST00000338635 STAB2Q8WWQ8 2551 aa0.1□□□□□ -2.39
XRCC4-202ENST00000338635 MYO18BQ8IUG5 2567 aa0.09□□□□□ -2.39
XRCC4-202ENST00000338635 CEP290O15078 2479 aa0.09□□□□□ -2.39
XRCC4-202ENST00000338635 HIVEP1P15822 2718 aa0.09□□□□□ -2.39
XRCC4-202ENST00000338635 TEP1Q99973 2627 aaKnown RBP0.09□□□□□ -2.39
XRCC4-202ENST00000338635 TOGARAM1Q9Y4F4 1720 aa0.09□□□□□ -2.4
XRCC4-202ENST00000338635 AGLP35573 1532 aa0.09□□□□□ -2.4
XRCC4-202ENST00000338635 USP9YO00507 2555 aaPredicted RBP0.08□□□□□ -2.4
XRCC4-202ENST00000338635 ZZEF1O43149 2961 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 IGLV5-48A0A075B6I7 105 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 SMIM27A0A1W2PRY6 76 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 SNRPGP15A8MWD9 76 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 MROH2AA6NES4 1674 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 DOPEY1Q5JWR5 2465 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 TENM2Q9NT68 2774 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 LRRK2Q5S007 2527 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 COL12A1Q99715 3063 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 FANCD2Q9BXW9 1451 aa0.08□□□□□ -2.4
XRCC4-202ENST00000338635 ZANQ9Y493 2812 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 SPRR2AP35326 72 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 SPTBN4Q9H254 2564 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 MUC2Q02817 5179 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 RIF1Q5UIP0 2472 aaKnown RBP0.07□□□□□ -2.4
XRCC4-202ENST00000338635 A0A0C4DFX4 3053 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 ANKRD11Q6UB99 2663 aaPredicted RBP0.07□□□□□ -2.4
XRCC4-202ENST00000338635 SPG11Q96JI7 2443 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 EFCAB6Q5THR3 1501 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 PCLOQ9Y6V0 5065 aa0.07□□□□□ -2.4
XRCC4-202ENST00000338635 PKD1P98161 4303 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 SRRM2Q9UQ35 2752 aaKnown RBP0.06□□□□□ -2.4
XRCC4-202ENST00000338635 ANKHD1Q8IWZ3 2542 aaKnown RBP0.06□□□□□ -2.4
XRCC4-202ENST00000338635 USP9XQ93008 2570 aaPredicted RBP0.06□□□□□ -2.4
XRCC4-202ENST00000338635 CUBNO60494 3623 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 ABCC8Q09428 1581 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 DMXL1Q9Y485 3027 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 ITPR3Q14573 2671 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 MMP24-AS1A0A0U1RRL7 71 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 KAAG1Q9UBP8 84 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 SACSQ9NZJ4 4579 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 EPG5Q9HCE0 2579 aa0.06□□□□□ -2.4
XRCC4-202ENST00000338635 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
XRCC4-202ENST00000338635 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 NBEAL1Q6ZS30 2694 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 MTORP42345 2549 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 DNAH9Q9NYC9 4486 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 A0A1B0GUL6 1792 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 WDFY4Q6ZS81 3184 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 PDZD2O15018 2839 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 ABCA5Q8WWZ7 1642 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 MGAM2Q2M2H8 2515 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 KRTAP6-2Q3LI66 62 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 MAP1AP78559 2803 aaPredicted RBP0.05□□□□□ -2.4
XRCC4-202ENST00000338635 TRIOO75962 3097 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 ITPR2Q14571 2701 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 CFAP46Q8IYW2 2715 aa0.05□□□□□ -2.4
XRCC4-202ENST00000338635 FASNP49327 2511 aaKnown RBP0.04□□□□□ -2.4
XRCC4-202ENST00000338635 NBEAL2Q6ZNJ1 2754 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 HTTP42858 3142 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 FAT3Q8TDW7 4589 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 AKAP9Q99996 3911 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 ACACBO00763 2458 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 MUC12Q9UKN1 5478 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 LINC01546A6NGU7 62 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 WFDC10BQ8IUB3 73 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 LAMA2P24043 3122 aaKnown RBP0.04□□□□□ -2.4
XRCC4-202ENST00000338635 CEP295Q9C0D2 2601 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 TGP01266 2768 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 ITPR1Q14643 2758 aa0.04□□□□□ -2.4
XRCC4-202ENST00000338635 CCDC168Q8NDH2 2452 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 MT1AP04731 61 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 SPRR2EP22531 72 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 SMIM2Q9BVW6 85 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 UBR4Q5T4S7 5183 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 RNF213Q63HN8 5207 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 GCN1Q92616 2671 aaKnown RBP0.03□□□□□ -2.4
XRCC4-202ENST00000338635 LMO7Q8WWI1 1683 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 NIPBLQ6KC79 2804 aaeCLIP0.03□□□□□ -2.4
XRCC4-202ENST00000338635 SPEGQ15772 3267 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 DCHS1Q96JQ0 3298 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 NBEAQ8NFP9 2946 aa0.03□□□□□ -2.4
XRCC4-202ENST00000338635 CFAP47Q6ZTR5 3102 aa0.03□□□□□ -2.41
XRCC4-202ENST00000338635 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.41
XRCC4-202ENST00000338635 KIF21BO75037 1637 aa0.03□□□□□ -2.41
XRCC4-202ENST00000338635 NRXN3Q9Y4C0 1643 aa0.03□□□□□ -2.41
XRCC4-202ENST00000338635 TACC2O95359 2948 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 M0QY20 66 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 TFF3Q07654 80 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 DEFB110Q30KQ9 67 aa0.02□□□□□ -2.41
XRCC4-202ENST00000338635 ABCA13Q86UQ4 5058 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms