RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-201ENST00000338427 A0A1B0GVX0 72 aa6.63□□□□□ -1.35
NUDCD3-201ENST00000338427 MT1FP04733 61 aa6.62□□□□□ -1.35
NUDCD3-201ENST00000338427 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
NUDCD3-201ENST00000338427 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
NUDCD3-201ENST00000338427 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
NUDCD3-201ENST00000338427 LOC105371267A0A1B0GV96 52 aa6.59□□□□□ -1.35
NUDCD3-201ENST00000338427 LCE2BO14633 110 aa6.59□□□□□ -1.35
NUDCD3-201ENST00000338427 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
NUDCD3-201ENST00000338427 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
NUDCD3-201ENST00000338427 C9JAW5 83 aa6.57□□□□□ -1.36
NUDCD3-201ENST00000338427 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
NUDCD3-201ENST00000338427 Q6ZQT0 140 aa6.57□□□□□ -1.36
NUDCD3-201ENST00000338427 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
NUDCD3-201ENST00000338427 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
NUDCD3-201ENST00000338427 SPINK7P58062 85 aa6.56□□□□□ -1.36
NUDCD3-201ENST00000338427 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
NUDCD3-201ENST00000338427 J3KT08 172 aa6.52□□□□□ -1.37
NUDCD3-201ENST00000338427 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
NUDCD3-201ENST00000338427 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
NUDCD3-201ENST00000338427 KRTAP9-7A8MTY7 169 aa6.51□□□□□ -1.37
NUDCD3-201ENST00000338427 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
NUDCD3-201ENST00000338427 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
NUDCD3-201ENST00000338427 NDUFB1O75438 58 aa6.49□□□□□ -1.37
NUDCD3-201ENST00000338427 ATXN8Q156A1 80 aa6.49□□□□□ -1.37
NUDCD3-201ENST00000338427 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
NUDCD3-201ENST00000338427 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
NUDCD3-201ENST00000338427 A8MWP4 228 aa6.47□□□□□ -1.37
NUDCD3-201ENST00000338427 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
NUDCD3-201ENST00000338427 JMJD7-PLA2G4BH0Y9G9 81 aa6.46□□□□□ -1.38
NUDCD3-201ENST00000338427 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
NUDCD3-201ENST00000338427 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
NUDCD3-201ENST00000338427 C21orf62-AS1Q17RA5 79 aa6.44□□□□□ -1.38
NUDCD3-201ENST00000338427 Q6ZVQ6 151 aa6.44□□□□□ -1.38
NUDCD3-201ENST00000338427 M0R143 59 aa6.43□□□□□ -1.38
NUDCD3-201ENST00000338427 NREPQ16612 68 aa6.42□□□□□ -1.38
NUDCD3-201ENST00000338427 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
NUDCD3-201ENST00000338427 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
NUDCD3-201ENST00000338427 BATFQ16520 125 aa6.4□□□□□ -1.38
NUDCD3-201ENST00000338427 PDE6GP18545 87 aa6.39□□□□□ -1.39
NUDCD3-201ENST00000338427 A0A1B0GW54 56 aa6.38□□□□□ -1.39
NUDCD3-201ENST00000338427 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
NUDCD3-201ENST00000338427 K7EQZ3 153 aa6.36□□□□□ -1.39
NUDCD3-201ENST00000338427 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
NUDCD3-201ENST00000338427 Q5W150 140 aa6.35□□□□□ -1.39
NUDCD3-201ENST00000338427 NDUFS5O43920 106 aa6.34□□□□□ -1.39
NUDCD3-201ENST00000338427 hDV103S1A0JD37 113 aa6.33□□□□□ -1.4
NUDCD3-201ENST00000338427 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
NUDCD3-201ENST00000338427 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
NUDCD3-201ENST00000338427 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
NUDCD3-201ENST00000338427 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
NUDCD3-201ENST00000338427 IGKV2D-30A0A075B6S6 120 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 C9orf118A6NHY6 69 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 IGKV2-30P06310 120 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 Q8N9L7 120 aa6.3□□□□□ -1.4
NUDCD3-201ENST00000338427 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
NUDCD3-201ENST00000338427 H3BT86 120 aa6.27□□□□□ -1.41
NUDCD3-201ENST00000338427 BPY2O14599 106 aa6.27□□□□□ -1.41
NUDCD3-201ENST00000338427 TSTD3H0UI37 97 aa6.26□□□□□ -1.41
NUDCD3-201ENST00000338427 PCP4L1A6NKN8 68 aa6.25□□□□□ -1.41
NUDCD3-201ENST00000338427 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
NUDCD3-201ENST00000338427 SMCPP49901 116 aaPredicted RBP6.23□□□□□ -1.41
NUDCD3-201ENST00000338427 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
NUDCD3-201ENST00000338427 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
NUDCD3-201ENST00000338427 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
NUDCD3-201ENST00000338427 LINC00846Q9NV44 126 aa6.2□□□□□ -1.42
NUDCD3-201ENST00000338427 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
NUDCD3-201ENST00000338427 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
NUDCD3-201ENST00000338427 C5orf47Q569G3 176 aa6.15□□□□□ -1.42
NUDCD3-201ENST00000338427 PRO0461Q9UI25 63 aa6.12□□□□□ -1.43
NUDCD3-201ENST00000338427 CXCL6P80162 114 aa6.11□□□□□ -1.43
NUDCD3-201ENST00000338427 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
NUDCD3-201ENST00000338427 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
NUDCD3-201ENST00000338427 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
NUDCD3-201ENST00000338427 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
NUDCD3-201ENST00000338427 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
NUDCD3-201ENST00000338427 MT1BP07438 61 aa6.05□□□□□ -1.44
NUDCD3-201ENST00000338427 LCA10Q71F78 164 aa6.05□□□□□ -1.44
NUDCD3-201ENST00000338427 S4R3F8 94 aa6.05□□□□□ -1.44
NUDCD3-201ENST00000338427 K7EP34 96 aa6.03□□□□□ -1.44
NUDCD3-201ENST00000338427 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
NUDCD3-201ENST00000338427 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
NUDCD3-201ENST00000338427 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
NUDCD3-201ENST00000338427 A0A087WVE0 104 aa5.99□□□□□ -1.45
NUDCD3-201ENST00000338427 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
NUDCD3-201ENST00000338427 A6NN06 94 aa5.97□□□□□ -1.45
NUDCD3-201ENST00000338427 PCP4P48539 62 aa5.97□□□□□ -1.45
NUDCD3-201ENST00000338427 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
NUDCD3-201ENST00000338427 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
NUDCD3-201ENST00000338427 Q5VV11 94 aa5.96□□□□□ -1.46
NUDCD3-201ENST00000338427 A0A1B0GV90 55 aa5.95□□□□□ -1.46
NUDCD3-201ENST00000338427 ETDBQ3ZM63 59 aa5.95□□□□□ -1.46
NUDCD3-201ENST00000338427 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
NUDCD3-201ENST00000338427 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
NUDCD3-201ENST00000338427 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
NUDCD3-201ENST00000338427 NEBP20929 6669 aa5.93□□□□□ -1.46
NUDCD3-201ENST00000338427 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
NUDCD3-201ENST00000338427 F8W1H4 67 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms