RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
CDK5RAP3-201ENST00000338399 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
CDK5RAP3-201ENST00000338399 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
CDK5RAP3-201ENST00000338399 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
CDK5RAP3-201ENST00000338399 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-201ENST00000338399 K7EQZ3 153 aa8.42□□□□□ -1.06
CDK5RAP3-201ENST00000338399 HERC2O95714 4834 aa8.41□□□□□ -1.06
CDK5RAP3-201ENST00000338399 C1orf195Q5TG92 126 aa8.41□□□□□ -1.06
CDK5RAP3-201ENST00000338399 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
CDK5RAP3-201ENST00000338399 A8MWP4 228 aa8.4□□□□□ -1.07
CDK5RAP3-201ENST00000338399 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
CDK5RAP3-201ENST00000338399 OXTP01178 125 aa8.38□□□□□ -1.07
CDK5RAP3-201ENST00000338399 NDUFB1O75438 58 aa8.36□□□□□ -1.07
CDK5RAP3-201ENST00000338399 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
CDK5RAP3-201ENST00000338399 ABCA13Q86UQ4 5058 aa8.33□□□□□ -1.08
CDK5RAP3-201ENST00000338399 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
CDK5RAP3-201ENST00000338399 IGHV6-1A0A0B4J1U7 121 aa8.32□□□□□ -1.08
CDK5RAP3-201ENST00000338399 TRAV7A0A075B6U4 112 aa8.32□□□□□ -1.08
CDK5RAP3-201ENST00000338399 KRTAP29-1A8MX34 341 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-201ENST00000338399 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
CDK5RAP3-201ENST00000338399 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-201ENST00000338399 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
CDK5RAP3-201ENST00000338399 C20orf197Q8N268 126 aa8.3□□□□□ -1.08
CDK5RAP3-201ENST00000338399 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
CDK5RAP3-201ENST00000338399 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
CDK5RAP3-201ENST00000338399 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
CDK5RAP3-201ENST00000338399 NOTCH2NLQ7Z3S9 236 aa8.28□□□□□ -1.08
CDK5RAP3-201ENST00000338399 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
CDK5RAP3-201ENST00000338399 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
CDK5RAP3-201ENST00000338399 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
CDK5RAP3-201ENST00000338399 H7BZZ5 65 aa8.26□□□□□ -1.09
CDK5RAP3-201ENST00000338399 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
CDK5RAP3-201ENST00000338399 CASC2Q6XLA1 102 aa8.25□□□□□ -1.09
CDK5RAP3-201ENST00000338399 C4orf26Q17RF5 130 aa8.24□□□□□ -1.09
CDK5RAP3-201ENST00000338399 hDV103S1A0JD37 113 aa8.23□□□□□ -1.09
CDK5RAP3-201ENST00000338399 LINC00313P59037 77 aa8.23□□□□□ -1.09
CDK5RAP3-201ENST00000338399 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
CDK5RAP3-201ENST00000338399 J3QL48 77 aa8.21□□□□□ -1.09
CDK5RAP3-201ENST00000338399 NDUFC1O43677 76 aa8.17□□□□□ -1.1
CDK5RAP3-201ENST00000338399 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
CDK5RAP3-201ENST00000338399 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP3-201ENST00000338399 MRPL34Q9BQ48 92 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-201ENST00000338399 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-201ENST00000338399 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
CDK5RAP3-201ENST00000338399 C9orf92A6NGG3 77 aa8.15□□□□□ -1.1
CDK5RAP3-201ENST00000338399 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
CDK5RAP3-201ENST00000338399 OCR1Q9BZK8 76 aa8.14□□□□□ -1.11
CDK5RAP3-201ENST00000338399 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
CDK5RAP3-201ENST00000338399 SMIM26A0A096LP01 95 aa8.13□□□□□ -1.11
CDK5RAP3-201ENST00000338399 NDUFS5O43920 106 aa8.13□□□□□ -1.11
CDK5RAP3-201ENST00000338399 PRR4Q16378 134 aa8.12□□□□□ -1.11
CDK5RAP3-201ENST00000338399 Q8N9P0 234 aaPredicted RBP8.08□□□□□ -1.12
CDK5RAP3-201ENST00000338399 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
CDK5RAP3-201ENST00000338399 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
CDK5RAP3-201ENST00000338399 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
CDK5RAP3-201ENST00000338399 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
CDK5RAP3-201ENST00000338399 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
CDK5RAP3-201ENST00000338399 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
CDK5RAP3-201ENST00000338399 A8MUU9 505 aa8□□□□□ -1.13
CDK5RAP3-201ENST00000338399 Q5W150 140 aa7.99□□□□□ -1.13
CDK5RAP3-201ENST00000338399 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
CDK5RAP3-201ENST00000338399 H0Y9P7 68 aa7.98□□□□□ -1.13
CDK5RAP3-201ENST00000338399 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
CDK5RAP3-201ENST00000338399 XP32Q5T750 250 aa7.98□□□□□ -1.13
CDK5RAP3-201ENST00000338399 MP68P56378 58 aa7.96□□□□□ -1.13
CDK5RAP3-201ENST00000338399 Q75L30 129 aa7.95□□□□□ -1.14
CDK5RAP3-201ENST00000338399 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
CDK5RAP3-201ENST00000338399 LPAP08519 4548 aa7.93□□□□□ -1.14
CDK5RAP3-201ENST00000338399 ZCCHC13Q8WW36 166 aaKnown RBP7.93□□□□□ -1.14
CDK5RAP3-201ENST00000338399 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-201ENST00000338399 C1orf64Q8NEQ6 169 aa7.9□□□□□ -1.14
CDK5RAP3-201ENST00000338399 H3BPC8 53 aa7.89□□□□□ -1.15
CDK5RAP3-201ENST00000338399 HERC1Q15751 4861 aa7.87□□□□□ -1.15
CDK5RAP3-201ENST00000338399 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
CDK5RAP3-201ENST00000338399 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
CDK5RAP3-201ENST00000338399 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
CDK5RAP3-201ENST00000338399 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
CDK5RAP3-201ENST00000338399 LRP2P98164 4655 aa7.84□□□□□ -1.15
CDK5RAP3-201ENST00000338399 IGKV2D-30A0A075B6S6 120 aa7.82□□□□□ -1.16
CDK5RAP3-201ENST00000338399 IGKV2-30P06310 120 aa7.82□□□□□ -1.16
CDK5RAP3-201ENST00000338399 CYP4F30PQ9H0H9 118 aa7.81□□□□□ -1.16
CDK5RAP3-201ENST00000338399 Q1T7F1 81 aa7.81□□□□□ -1.16
CDK5RAP3-201ENST00000338399 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
CDK5RAP3-201ENST00000338399 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
CDK5RAP3-201ENST00000338399 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
CDK5RAP3-201ENST00000338399 SPINK7P58062 85 aa7.75□□□□□ -1.17
CDK5RAP3-201ENST00000338399 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
CDK5RAP3-201ENST00000338399 HRES1P13985 223 aa7.69□□□□□ -1.18
CDK5RAP3-201ENST00000338399 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
CDK5RAP3-201ENST00000338399 V9GYY9 64 aa7.68□□□□□ -1.18
CDK5RAP3-201ENST00000338399 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
CDK5RAP3-201ENST00000338399 PSPHP1O15172 72 aa7.64□□□□□ -1.19
CDK5RAP3-201ENST00000338399 A8MUN3 132 aa7.6□□□□□ -1.19
CDK5RAP3-201ENST00000338399 Q5VV11 94 aa7.59□□□□□ -1.19
CDK5RAP3-201ENST00000338399 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
CDK5RAP3-201ENST00000338399 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
CDK5RAP3-201ENST00000338399 DMAC1Q96GE9 116 aa7.53□□□□□ -1.2
CDK5RAP3-201ENST00000338399 SEC61GP60059 68 aa7.53□□□□□ -1.2
CDK5RAP3-201ENST00000338399 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
CDK5RAP3-201ENST00000338399 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms