RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 Q6ZQT0 140 aa7.01□□□□□ -1.29
PRIM1-201ENST00000338193 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
PRIM1-201ENST00000338193 VPS25Q9BRG1 176 aa7□□□□□ -1.29
PRIM1-201ENST00000338193 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
PRIM1-201ENST00000338193 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
PRIM1-201ENST00000338193 JMJD7-PLA2G4BH0Y9G9 81 aa6.98□□□□□ -1.29
PRIM1-201ENST00000338193 GTF2H5Q6ZYL4 71 aa6.98□□□□□ -1.29
PRIM1-201ENST00000338193 Q96NJ1 140 aa6.98□□□□□ -1.29
PRIM1-201ENST00000338193 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.29
PRIM1-201ENST00000338193 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.29
PRIM1-201ENST00000338193 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
PRIM1-201ENST00000338193 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
PRIM1-201ENST00000338193 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
PRIM1-201ENST00000338193 F8W1H4 67 aa6.92□□□□□ -1.3
PRIM1-201ENST00000338193 TPRXLQ17RH7 258 aa6.92□□□□□ -1.3
PRIM1-201ENST00000338193 ETDBQ3ZM63 59 aa6.92□□□□□ -1.3
PRIM1-201ENST00000338193 C9orf92A6NGG3 77 aa6.91□□□□□ -1.3
PRIM1-201ENST00000338193 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
PRIM1-201ENST00000338193 SS18L2Q9UHA2 77 aa6.9□□□□□ -1.31
PRIM1-201ENST00000338193 PDE6GP18545 87 aa6.88□□□□□ -1.31
PRIM1-201ENST00000338193 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
PRIM1-201ENST00000338193 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
PRIM1-201ENST00000338193 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
PRIM1-201ENST00000338193 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
PRIM1-201ENST00000338193 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
PRIM1-201ENST00000338193 DSCR10P59022 87 aa6.82□□□□□ -1.32
PRIM1-201ENST00000338193 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
PRIM1-201ENST00000338193 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
PRIM1-201ENST00000338193 A0A1B0GW54 56 aa6.81□□□□□ -1.32
PRIM1-201ENST00000338193 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
PRIM1-201ENST00000338193 NREPQ16612 68 aa6.79□□□□□ -1.32
PRIM1-201ENST00000338193 Q6ZVQ6 151 aa6.79□□□□□ -1.32
PRIM1-201ENST00000338193 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
PRIM1-201ENST00000338193 IGKV3D-7A0A0C4DH55 119 aa6.76□□□□□ -1.33
PRIM1-201ENST00000338193 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
PRIM1-201ENST00000338193 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
PRIM1-201ENST00000338193 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
PRIM1-201ENST00000338193 A8MWP4 228 aa6.73□□□□□ -1.33
PRIM1-201ENST00000338193 Q8N9L7 120 aa6.73□□□□□ -1.33
PRIM1-201ENST00000338193 J3KT08 172 aa6.72□□□□□ -1.33
PRIM1-201ENST00000338193 K7EQZ3 153 aa6.72□□□□□ -1.33
PRIM1-201ENST00000338193 LINC00313P59037 77 aa6.71□□□□□ -1.33
PRIM1-201ENST00000338193 RPL37P61927 97 aaKnown RBP6.71□□□□□ -1.33
PRIM1-201ENST00000338193 BPY2O14599 106 aa6.7□□□□□ -1.34
PRIM1-201ENST00000338193 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
PRIM1-201ENST00000338193 MUC2Q02817 5179 aa6.7□□□□□ -1.34
PRIM1-201ENST00000338193 PRR15Q8IV56 129 aa6.69□□□□□ -1.34
PRIM1-201ENST00000338193 A8MUU9 505 aa6.69□□□□□ -1.34
PRIM1-201ENST00000338193 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
PRIM1-201ENST00000338193 UBL5Q9BZL1 73 aa6.69□□□□□ -1.34
PRIM1-201ENST00000338193 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
PRIM1-201ENST00000338193 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
PRIM1-201ENST00000338193 Q75L30 129 aa6.67□□□□□ -1.34
PRIM1-201ENST00000338193 C8orf87E5RJ46 101 aa6.66□□□□□ -1.34
PRIM1-201ENST00000338193 NDUFB1O75438 58 aa6.66□□□□□ -1.34
PRIM1-201ENST00000338193 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
PRIM1-201ENST00000338193 FAM240AA0A1B0GVK7 77 aa6.65□□□□□ -1.35
PRIM1-201ENST00000338193 ACYP1P07311 99 aa6.62□□□□□ -1.35
PRIM1-201ENST00000338193 WFDC13Q8IUB5 93 aa6.6□□□□□ -1.35
PRIM1-201ENST00000338193 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
PRIM1-201ENST00000338193 CXCL6P80162 114 aa6.58□□□□□ -1.36
PRIM1-201ENST00000338193 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
PRIM1-201ENST00000338193 MRPL34Q9BQ48 92 aaKnown RBP6.57□□□□□ -1.36
PRIM1-201ENST00000338193 TMEM254Q8TBM7 123 aa6.57□□□□□ -1.36
PRIM1-201ENST00000338193 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
PRIM1-201ENST00000338193 CASC2Q6XLA1 102 aa6.55□□□□□ -1.36
PRIM1-201ENST00000338193 HCG22E2RYF7 251 aa6.54□□□□□ -1.36
PRIM1-201ENST00000338193 FAT4Q6V0I7 4981 aa6.53□□□□□ -1.36
PRIM1-201ENST00000338193 LINC00643Q86TS7 51 aa6.53□□□□□ -1.36
PRIM1-201ENST00000338193 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
PRIM1-201ENST00000338193 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
PRIM1-201ENST00000338193 A0A087WVE0 104 aa6.51□□□□□ -1.37
PRIM1-201ENST00000338193 J3QR89 54 aa6.51□□□□□ -1.37
PRIM1-201ENST00000338193 Q5W150 140 aa6.5□□□□□ -1.37
PRIM1-201ENST00000338193 NDUFS5O43920 106 aa6.49□□□□□ -1.37
PRIM1-201ENST00000338193 ATP5EP2Q5VTU8 51 aa6.49□□□□□ -1.37
PRIM1-201ENST00000338193 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
PRIM1-201ENST00000338193 K7ERU9 68 aa6.45□□□□□ -1.38
PRIM1-201ENST00000338193 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
PRIM1-201ENST00000338193 HRES1P13985 223 aa6.43□□□□□ -1.38
PRIM1-201ENST00000338193 SPINK7P58062 85 aa6.41□□□□□ -1.38
PRIM1-201ENST00000338193 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
PRIM1-201ENST00000338193 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
PRIM1-201ENST00000338193 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
PRIM1-201ENST00000338193 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
PRIM1-201ENST00000338193 MT1HP80294 61 aa6.33□□□□□ -1.4
PRIM1-201ENST00000338193 A0A0U1RQV1 116 aa6.32□□□□□ -1.4
PRIM1-201ENST00000338193 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
PRIM1-201ENST00000338193 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
PRIM1-201ENST00000338193 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
PRIM1-201ENST00000338193 C7orf65Q6ZTY9 151 aa6.29□□□□□ -1.4
PRIM1-201ENST00000338193 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
PRIM1-201ENST00000338193 IMUPQ9GZP8 106 aa6.29□□□□□ -1.4
PRIM1-201ENST00000338193 TRAV22A0A0B4J277 110 aa6.28□□□□□ -1.4
PRIM1-201ENST00000338193 UQCRQO14949 82 aa6.27□□□□□ -1.41
PRIM1-201ENST00000338193 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
PRIM1-201ENST00000338193 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
PRIM1-201ENST00000338193 H0Y9P7 68 aa6.26□□□□□ -1.41
PRIM1-201ENST00000338193 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
PRIM1-201ENST00000338193 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms