RNA–Protein interactions for RNA: ENST00000336553.10

FGFR2-201, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-201ENST00000336553 COA5Q86WW8 74 aa12.66□□□□□ -0.38
FGFR2-201ENST00000336553 DNAH6Q9C0G6 4158 aa12.65□□□□□ -0.38
FGFR2-201ENST00000336553 C1orf134Q5TEV5 83 aa12.65□□□□□ -0.39
FGFR2-201ENST00000336553 Q5VV11 94 aa12.65□□□□□ -0.39
FGFR2-201ENST00000336553 PLAC8Q9NZF1 115 aa12.64□□□□□ -0.39
FGFR2-201ENST00000336553 A0A087X002 238 aa12.64□□□□□ -0.39
FGFR2-201ENST00000336553 NOTCH2NLQ7Z3S9 236 aa12.64□□□□□ -0.39
FGFR2-201ENST00000336553 LY6G6CO95867 125 aa12.62□□□□□ -0.39
FGFR2-201ENST00000336553 MRPL34Q9BQ48 92 aaKnown RBP12.62□□□□□ -0.39
FGFR2-201ENST00000336553 LIMD2Q9BT23 127 aa12.61□□□□□ -0.39
FGFR2-201ENST00000336553 PRR15LQ9BU68 103 aa12.59□□□□□ -0.39
FGFR2-201ENST00000336553 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
FGFR2-201ENST00000336553 CHKB-CPT1BH3BT56 60 aa12.56□□□□□ -0.4
FGFR2-201ENST00000336553 A8MU10 97 aa12.55□□□□□ -0.4
FGFR2-201ENST00000336553 DNAH11Q96DT5 4516 aa12.53□□□□□ -0.4
FGFR2-201ENST00000336553 DNAH5Q8TE73 4624 aa12.52□□□□□ -0.41
FGFR2-201ENST00000336553 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
FGFR2-201ENST00000336553 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
FGFR2-201ENST00000336553 IGLV7-43P04211 117 aa12.5□□□□□ -0.41
FGFR2-201ENST00000336553 KRTAP21-3Q3LHN1 58 aa12.48□□□□□ -0.41
FGFR2-201ENST00000336553 HYDINQ4G0P3 5121 aa12.46□□□□□ -0.41
FGFR2-201ENST00000336553 KRTAP10-2P60368 255 aa12.46□□□□□ -0.42
FGFR2-201ENST00000336553 Q5W150 140 aa12.45□□□□□ -0.42
FGFR2-201ENST00000336553 SPAG11AQ6PDA7 123 aa12.45□□□□□ -0.42
FGFR2-201ENST00000336553 HRES1P13985 223 aa12.44□□□□□ -0.42
FGFR2-201ENST00000336553 LOC101927531A0A1B0GV80 90 aa12.43□□□□□ -0.42
FGFR2-201ENST00000336553 Q75L30 129 aa12.42□□□□□ -0.42
FGFR2-201ENST00000336553 PKD1P98161 4303 aa12.41□□□□□ -0.42
FGFR2-201ENST00000336553 FAT2Q9NYQ8 4349 aa12.39□□□□□ -0.43
FGFR2-201ENST00000336553 A6NED7 52 aa12.39□□□□□ -0.43
FGFR2-201ENST00000336553 PMAIP1Q13794 54 aa12.37□□□□□ -0.43
FGFR2-201ENST00000336553 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
FGFR2-201ENST00000336553 LINC01558Q9Y6Z2 57 aa12.36□□□□□ -0.43
FGFR2-201ENST00000336553 LCA10Q71F78 164 aa12.35□□□□□ -0.43
FGFR2-201ENST00000336553 SSBP3-AS1Q7Z2R9 100 aa12.35□□□□□ -0.43
FGFR2-201ENST00000336553 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
FGFR2-201ENST00000336553 C8orf87E5RJ46 101 aa12.3□□□□□ -0.44
FGFR2-201ENST00000336553 KRTAP10-1P60331 282 aa12.29□□□□□ -0.44
FGFR2-201ENST00000336553 Q6ZSA8 131 aa12.28□□□□□ -0.44
FGFR2-201ENST00000336553 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
FGFR2-201ENST00000336553 LINC00313P59037 77 aa12.26□□□□□ -0.45
FGFR2-201ENST00000336553 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
FGFR2-201ENST00000336553 LRP1BQ9NZR2 4599 aa12.25□□□□□ -0.45
FGFR2-201ENST00000336553 KRTAP13-2Q52LG2 175 aa12.23□□□□□ -0.45
FGFR2-201ENST00000336553 CDC42SE1Q9NRR8 79 aa12.22□□□□□ -0.45
FGFR2-201ENST00000336553 ATP11AUNQ6ZP68 121 aa12.22□□□□□ -0.45
FGFR2-201ENST00000336553 ACYP2P14621 99 aa12.2□□□□□ -0.46
FGFR2-201ENST00000336553 SPINK7P58062 85 aa12.2□□□□□ -0.46
FGFR2-201ENST00000336553 SACSQ9NZJ4 4579 aa12.18□□□□□ -0.46
FGFR2-201ENST00000336553 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
FGFR2-201ENST00000336553 DMAC1Q96GE9 116 aa12.13□□□□□ -0.47
FGFR2-201ENST00000336553 SEC61GP60059 68 aa12.12□□□□□ -0.47
FGFR2-201ENST00000336553 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
FGFR2-201ENST00000336553 IGKV2-30P06310 120 aa12.1□□□□□ -0.47
FGFR2-201ENST00000336553 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
FGFR2-201ENST00000336553 A6NN06 94 aa12.07□□□□□ -0.48
FGFR2-201ENST00000336553 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
FGFR2-201ENST00000336553 KRTAP1-4P0C5Y4 121 aa12.05□□□□□ -0.48
FGFR2-201ENST00000336553 KTN1-AS1Q86SY8 53 aa12.05□□□□□ -0.48
FGFR2-201ENST00000336553 IGKV2D-30A0A075B6S6 120 aa11.99□□□□□ -0.49
FGFR2-201ENST00000336553 PLA2G1BP04054 148 aaKnown RBP11.96□□□□□ -0.5
FGFR2-201ENST00000336553 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.5
FGFR2-201ENST00000336553 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
FGFR2-201ENST00000336553 A0A1B0GU69 56 aa11.93□□□□□ -0.5
FGFR2-201ENST00000336553 TYMSOSQ8TAI1 123 aa11.93□□□□□ -0.5
FGFR2-201ENST00000336553 C7orf65Q6ZTY9 151 aa11.87□□□□□ -0.51
FGFR2-201ENST00000336553 A0A1B0GVY2 172 aa11.86□□□□□ -0.51
FGFR2-201ENST00000336553 SPINK1P00995 79 aa11.86□□□□□ -0.51
FGFR2-201ENST00000336553 RYR2Q92736 4967 aa11.82□□□□□ -0.52
FGFR2-201ENST00000336553 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
FGFR2-201ENST00000336553 APOBP04114 4563 aaKnown RBP11.8□□□□□ -0.52
FGFR2-201ENST00000336553 SMR3BP02814 79 aaPredicted RBP11.78□□□□□ -0.52
FGFR2-201ENST00000336553 LINC00304Q8N9R0 145 aa11.74□□□□□ -0.53
FGFR2-201ENST00000336553 SPATA8Q6RVD6 105 aa11.74□□□□□ -0.53
FGFR2-201ENST00000336553 FAT1Q14517 4588 aa11.73□□□□□ -0.53
FGFR2-201ENST00000336553 KMT2CQ8NEZ4 4911 aaKnown RBP11.73□□□□□ -0.53
FGFR2-201ENST00000336553 Q8N1X5 172 aa11.73□□□□□ -0.53
FGFR2-201ENST00000336553 UQCR11O14957 56 aa11.71□□□□□ -0.54
FGFR2-201ENST00000336553 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.54
FGFR2-201ENST00000336553 KRTAP10-4P60372 401 aaPredicted RBP11.7□□□□□ -0.54
FGFR2-201ENST00000336553 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
FGFR2-201ENST00000336553 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
FGFR2-201ENST00000336553 C9orf92A6NGG3 77 aa11.6□□□□□ -0.55
FGFR2-201ENST00000336553 PRAC1Q96KF2 57 aa11.58□□□□□ -0.56
FGFR2-201ENST00000336553 ADM2Q7Z4H4 148 aa11.56□□□□□ -0.56
FGFR2-201ENST00000336553 A8MUU9 505 aa11.49□□□□□ -0.57
FGFR2-201ENST00000336553 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
FGFR2-201ENST00000336553 KRTAP3-1Q9BYR8 98 aa11.42□□□□□ -0.58
FGFR2-201ENST00000336553 RYR3Q15413 4870 aa11.4□□□□□ -0.58
FGFR2-201ENST00000336553 HSPG2P98160 4391 aa11.37□□□□□ -0.59
FGFR2-201ENST00000336553 H0YAA0 97 aa11.31□□□□□ -0.6
FGFR2-201ENST00000336553 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
FGFR2-201ENST00000336553 TNXBP22105 4242 aa11.3□□□□□ -0.6
FGFR2-201ENST00000336553 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.6
FGFR2-201ENST00000336553 A0A1B0GU33 70 aa11.25□□□□□ -0.61
FGFR2-201ENST00000336553 Q5VSD8 79 aa11.25□□□□□ -0.61
FGFR2-201ENST00000336553 RYR1P21817 5038 aa11.25□□□□□ -0.61
FGFR2-201ENST00000336553 KRTAP17-1Q9BYP8 105 aa11.23□□□□□ -0.61
FGFR2-201ENST00000336553 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
FGFR2-201ENST00000336553 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms