RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
APOBEC3B-202ENST00000335760 XP32Q5T750 250 aa7.71□□□□□ -1.18
APOBEC3B-202ENST00000335760 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
APOBEC3B-202ENST00000335760 Q6ZVQ6 151 aa7.69□□□□□ -1.18
APOBEC3B-202ENST00000335760 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
APOBEC3B-202ENST00000335760 DSCR10P59022 87 aa7.67□□□□□ -1.18
APOBEC3B-202ENST00000335760 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
APOBEC3B-202ENST00000335760 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
APOBEC3B-202ENST00000335760 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
APOBEC3B-202ENST00000335760 NDUFB1O75438 58 aa7.65□□□□□ -1.18
APOBEC3B-202ENST00000335760 A8MWP4 228 aa7.64□□□□□ -1.19
APOBEC3B-202ENST00000335760 BPY2O14599 106 aa7.64□□□□□ -1.19
APOBEC3B-202ENST00000335760 LINC00313P59037 77 aa7.64□□□□□ -1.19
APOBEC3B-202ENST00000335760 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
APOBEC3B-202ENST00000335760 IGKV3D-7A0A0C4DH55 119 aa7.62□□□□□ -1.19
APOBEC3B-202ENST00000335760 C8orf87E5RJ46 101 aa7.61□□□□□ -1.19
APOBEC3B-202ENST00000335760 ACYP1P07311 99 aa7.61□□□□□ -1.19
APOBEC3B-202ENST00000335760 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
APOBEC3B-202ENST00000335760 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
APOBEC3B-202ENST00000335760 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
APOBEC3B-202ENST00000335760 PRR15Q8IV56 129 aa7.59□□□□□ -1.19
APOBEC3B-202ENST00000335760 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.2
APOBEC3B-202ENST00000335760 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
APOBEC3B-202ENST00000335760 K7EQZ3 153 aa7.58□□□□□ -1.2
APOBEC3B-202ENST00000335760 C8orf17Q9NRJ1 99 aa7.58□□□□□ -1.2
APOBEC3B-202ENST00000335760 Q75L30 129 aa7.57□□□□□ -1.2
APOBEC3B-202ENST00000335760 Q8N9L7 120 aa7.56□□□□□ -1.2
APOBEC3B-202ENST00000335760 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
APOBEC3B-202ENST00000335760 A8MUU9 505 aa7.54□□□□□ -1.2
APOBEC3B-202ENST00000335760 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
APOBEC3B-202ENST00000335760 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
APOBEC3B-202ENST00000335760 J3QR89 54 aa7.53□□□□□ -1.2
APOBEC3B-202ENST00000335760 KRTAP4-6Q9BYQ5 205 aa7.53□□□□□ -1.2
APOBEC3B-202ENST00000335760 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
APOBEC3B-202ENST00000335760 CXCL6P80162 114 aa7.52□□□□□ -1.21
APOBEC3B-202ENST00000335760 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
APOBEC3B-202ENST00000335760 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
APOBEC3B-202ENST00000335760 TMEM254Q8TBM7 123 aa7.47□□□□□ -1.21
APOBEC3B-202ENST00000335760 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 LINC00643Q86TS7 51 aa7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 Q8N9P0 234 aaPredicted RBP7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 MRPL34Q9BQ48 92 aaKnown RBP7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 MUC2Q02817 5179 aa7.46□□□□□ -1.21
APOBEC3B-202ENST00000335760 KRTAP4-1Q9BYQ7 146 aa7.46□□□□□ -1.22
APOBEC3B-202ENST00000335760 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
APOBEC3B-202ENST00000335760 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
APOBEC3B-202ENST00000335760 K7ERU9 68 aa7.42□□□□□ -1.22
APOBEC3B-202ENST00000335760 NDUFS5O43920 106 aa7.41□□□□□ -1.22
APOBEC3B-202ENST00000335760 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
APOBEC3B-202ENST00000335760 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
APOBEC3B-202ENST00000335760 A0A087WVE0 104 aa7.32□□□□□ -1.24
APOBEC3B-202ENST00000335760 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
APOBEC3B-202ENST00000335760 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
APOBEC3B-202ENST00000335760 Q5W150 140 aa7.29□□□□□ -1.24
APOBEC3B-202ENST00000335760 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
APOBEC3B-202ENST00000335760 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
APOBEC3B-202ENST00000335760 SPINK7P58062 85 aa7.25□□□□□ -1.25
APOBEC3B-202ENST00000335760 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.25
APOBEC3B-202ENST00000335760 IMUPQ9GZP8 106 aa7.21□□□□□ -1.25
APOBEC3B-202ENST00000335760 HRES1P13985 223 aa7.2□□□□□ -1.26
APOBEC3B-202ENST00000335760 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
APOBEC3B-202ENST00000335760 IGKV2-30P06310 120 aa7.2□□□□□ -1.26
APOBEC3B-202ENST00000335760 COX6B2Q6YFQ2 88 aa7.19□□□□□ -1.26
APOBEC3B-202ENST00000335760 UQCRQO14949 82 aa7.17□□□□□ -1.26
APOBEC3B-202ENST00000335760 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
APOBEC3B-202ENST00000335760 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
APOBEC3B-202ENST00000335760 TRAV22A0A0B4J277 110 aa7.15□□□□□ -1.26
APOBEC3B-202ENST00000335760 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
APOBEC3B-202ENST00000335760 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
APOBEC3B-202ENST00000335760 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
APOBEC3B-202ENST00000335760 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
APOBEC3B-202ENST00000335760 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
APOBEC3B-202ENST00000335760 H0Y9P7 68 aa7.11□□□□□ -1.27
APOBEC3B-202ENST00000335760 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
APOBEC3B-202ENST00000335760 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
APOBEC3B-202ENST00000335760 ATOX1O00244 68 aa7.08□□□□□ -1.28
APOBEC3B-202ENST00000335760 LOC101927531A0A1B0GV80 90 aa7.07□□□□□ -1.28
APOBEC3B-202ENST00000335760 MT1HP80294 61 aa7.07□□□□□ -1.28
APOBEC3B-202ENST00000335760 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
APOBEC3B-202ENST00000335760 MP68P56378 58 aa7.04□□□□□ -1.28
APOBEC3B-202ENST00000335760 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
APOBEC3B-202ENST00000335760 C1orf64Q8NEQ6 169 aa7.04□□□□□ -1.28
APOBEC3B-202ENST00000335760 FLGP20930 4061 aaPredicted RBP7.03□□□□□ -1.28
APOBEC3B-202ENST00000335760 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
APOBEC3B-202ENST00000335760 LINC00208Q96KT6 92 aa7.03□□□□□ -1.28
APOBEC3B-202ENST00000335760 SMIM20Q8N5G0 67 aa7.02□□□□□ -1.29
APOBEC3B-202ENST00000335760 TRAV7A0A075B6U4 112 aa7□□□□□ -1.29
APOBEC3B-202ENST00000335760 M0R2T5 61 aa6.99□□□□□ -1.29
APOBEC3B-202ENST00000335760 H3BPC8 53 aa6.97□□□□□ -1.29
APOBEC3B-202ENST00000335760 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
APOBEC3B-202ENST00000335760 KLKP1Q107X0 134 aa6.94□□□□□ -1.3
APOBEC3B-202ENST00000335760 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
APOBEC3B-202ENST00000335760 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
APOBEC3B-202ENST00000335760 SERP2Q8N6R1 65 aa6.9□□□□□ -1.31
APOBEC3B-202ENST00000335760 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
APOBEC3B-202ENST00000335760 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
APOBEC3B-202ENST00000335760 C20orf197Q8N268 126 aa6.82□□□□□ -1.32
APOBEC3B-202ENST00000335760 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
APOBEC3B-202ENST00000335760 S4R3F8 94 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms