RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ALMS1Q8TCU4 4167 aa10.43□□□□□ -0.74
LRCH3-201ENST00000334859 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
LRCH3-201ENST00000334859 PCOTHQ58A44 107 aa10.42□□□□□ -0.74
LRCH3-201ENST00000334859 BRK1Q8WUW1 75 aa10.41□□□□□ -0.74
LRCH3-201ENST00000334859 Q1T7F1 81 aa10.41□□□□□ -0.74
LRCH3-201ENST00000334859 PRO0628Q9UI54 55 aa10.41□□□□□ -0.74
LRCH3-201ENST00000334859 CD164Q04900 197 aa10.38□□□□□ -0.75
LRCH3-201ENST00000334859 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
LRCH3-201ENST00000334859 KRTAP10-1P60331 282 aa10.36□□□□□ -0.75
LRCH3-201ENST00000334859 PSPHP1O15172 72 aa10.35□□□□□ -0.75
LRCH3-201ENST00000334859 IGLV7-46A0A075B6I9 117 aa10.35□□□□□ -0.75
LRCH3-201ENST00000334859 Q6ZSA8 131 aa10.33□□□□□ -0.76
LRCH3-201ENST00000334859 PKD1P98161 4303 aa10.32□□□□□ -0.76
LRCH3-201ENST00000334859 COA5Q86WW8 74 aa10.3□□□□□ -0.76
LRCH3-201ENST00000334859 FAT2Q9NYQ8 4349 aa10.29□□□□□ -0.76
LRCH3-201ENST00000334859 KRTAP13-2Q52LG2 175 aa10.29□□□□□ -0.76
LRCH3-201ENST00000334859 LRP1BQ9NZR2 4599 aa10.29□□□□□ -0.76
LRCH3-201ENST00000334859 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
LRCH3-201ENST00000334859 V9GYY9 64 aa10.28□□□□□ -0.76
LRCH3-201ENST00000334859 A8MUN3 132 aa10.26□□□□□ -0.77
LRCH3-201ENST00000334859 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
LRCH3-201ENST00000334859 Q5W150 140 aa10.26□□□□□ -0.77
LRCH3-201ENST00000334859 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
LRCH3-201ENST00000334859 Q8N9P0 234 aaPredicted RBP10.22□□□□□ -0.77
LRCH3-201ENST00000334859 LINC00313P59037 77 aa10.21□□□□□ -0.77
LRCH3-201ENST00000334859 C1orf195Q5TG92 126 aa10.21□□□□□ -0.77
LRCH3-201ENST00000334859 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
LRCH3-201ENST00000334859 KRTAP1-4P0C5Y4 121 aa10.19□□□□□ -0.78
LRCH3-201ENST00000334859 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
LRCH3-201ENST00000334859 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
LRCH3-201ENST00000334859 VPS13BQ7Z7G8 4022 aa10.18□□□□□ -0.78
LRCH3-201ENST00000334859 Q5VV11 94 aa10.16□□□□□ -0.78
LRCH3-201ENST00000334859 HRES1P13985 223 aa10.14□□□□□ -0.79
LRCH3-201ENST00000334859 RETNLBQ9BQ08 111 aa10.14□□□□□ -0.79
LRCH3-201ENST00000334859 PLA2G1BP04054 148 aaKnown RBP10.13□□□□□ -0.79
LRCH3-201ENST00000334859 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
LRCH3-201ENST00000334859 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
LRCH3-201ENST00000334859 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
LRCH3-201ENST00000334859 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
LRCH3-201ENST00000334859 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
LRCH3-201ENST00000334859 TYMSOSQ8TAI1 123 aa10.09□□□□□ -0.79
LRCH3-201ENST00000334859 KRTAP16-1A8MUX0 517 aa10.05□□□□□ -0.8
LRCH3-201ENST00000334859 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
LRCH3-201ENST00000334859 Q75L30 129 aa10.02□□□□□ -0.81
LRCH3-201ENST00000334859 SPINK1P00995 79 aa10.02□□□□□ -0.81
LRCH3-201ENST00000334859 IGKV2-30P06310 120 aa10□□□□□ -0.81
LRCH3-201ENST00000334859 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
LRCH3-201ENST00000334859 A8MU10 97 aa10□□□□□ -0.81
LRCH3-201ENST00000334859 ACYP2P14621 99 aa9.99□□□□□ -0.81
LRCH3-201ENST00000334859 SACSQ9NZJ4 4579 aa9.99□□□□□ -0.81
LRCH3-201ENST00000334859 A6NED7 52 aa9.99□□□□□ -0.81
LRCH3-201ENST00000334859 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
LRCH3-201ENST00000334859 DMAC1Q96GE9 116 aa9.97□□□□□ -0.81
LRCH3-201ENST00000334859 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.81
LRCH3-201ENST00000334859 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
LRCH3-201ENST00000334859 IGKV2D-30A0A075B6S6 120 aa9.95□□□□□ -0.82
LRCH3-201ENST00000334859 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
LRCH3-201ENST00000334859 LCA10Q71F78 164 aa9.87□□□□□ -0.83
LRCH3-201ENST00000334859 RPS29P62273 56 aaKnown RBP9.86□□□□□ -0.83
LRCH3-201ENST00000334859 SPTSSBQ8NFR3 76 aa9.85□□□□□ -0.83
LRCH3-201ENST00000334859 SPINK7P58062 85 aa9.83□□□□□ -0.84
LRCH3-201ENST00000334859 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
LRCH3-201ENST00000334859 A0A1B0GVY2 172 aa9.82□□□□□ -0.84
LRCH3-201ENST00000334859 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
LRCH3-201ENST00000334859 FAT1Q14517 4588 aa9.81□□□□□ -0.84
LRCH3-201ENST00000334859 C7orf65Q6ZTY9 151 aa9.81□□□□□ -0.84
LRCH3-201ENST00000334859 APOBP04114 4563 aaKnown RBP9.78□□□□□ -0.84
LRCH3-201ENST00000334859 ATP11AUNQ6ZP68 121 aa9.76□□□□□ -0.85
LRCH3-201ENST00000334859 C9orf92A6NGG3 77 aa9.76□□□□□ -0.85
LRCH3-201ENST00000334859 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-201ENST00000334859 A0A1B0GU69 56 aa9.72□□□□□ -0.85
LRCH3-201ENST00000334859 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
LRCH3-201ENST00000334859 Q8N1X5 172 aa9.7□□□□□ -0.86
LRCH3-201ENST00000334859 RYR2Q92736 4967 aa9.67□□□□□ -0.86
LRCH3-201ENST00000334859 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
LRCH3-201ENST00000334859 A8MUU9 505 aa9.63□□□□□ -0.87
LRCH3-201ENST00000334859 KMT2CQ8NEZ4 4911 aaKnown RBP9.62□□□□□ -0.87
LRCH3-201ENST00000334859 A6NN06 94 aa9.61□□□□□ -0.87
LRCH3-201ENST00000334859 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
LRCH3-201ENST00000334859 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
LRCH3-201ENST00000334859 UQCR11O14957 56 aa9.52□□□□□ -0.89
LRCH3-201ENST00000334859 MIR22HGQ0VDD5 57 aa9.49□□□□□ -0.89
LRCH3-201ENST00000334859 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
LRCH3-201ENST00000334859 SEC61GP60059 68 aa9.46□□□□□ -0.9
LRCH3-201ENST00000334859 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
LRCH3-201ENST00000334859 Q5VSD8 79 aa9.44□□□□□ -0.9
LRCH3-201ENST00000334859 KRTAP3-1Q9BYR8 98 aa9.44□□□□□ -0.9
LRCH3-201ENST00000334859 TNXBP22105 4242 aa9.4□□□□□ -0.9
LRCH3-201ENST00000334859 HSPG2P98160 4391 aa9.39□□□□□ -0.91
LRCH3-201ENST00000334859 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
LRCH3-201ENST00000334859 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
LRCH3-201ENST00000334859 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-201ENST00000334859 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
LRCH3-201ENST00000334859 RYR3Q15413 4870 aa9.29□□□□□ -0.92
LRCH3-201ENST00000334859 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
LRCH3-201ENST00000334859 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
LRCH3-201ENST00000334859 RYR1P21817 5038 aa9.24□□□□□ -0.93
LRCH3-201ENST00000334859 H0YAA0 97 aa9.22□□□□□ -0.93
LRCH3-201ENST00000334859 XP32Q5T750 250 aa9.22□□□□□ -0.93
LRCH3-201ENST00000334859 MYCBP2O75592 4640 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms