RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
TREM1-202ENST00000334475 LINC00472Q9H8W2 130 aa5.42□□□□□ -1.54
TREM1-202ENST00000334475 A0A0G2JQZ4 141 aa5.41□□□□□ -1.54
TREM1-202ENST00000334475 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
TREM1-202ENST00000334475 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
TREM1-202ENST00000334475 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
TREM1-202ENST00000334475 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
TREM1-202ENST00000334475 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
TREM1-202ENST00000334475 A8MWP4 228 aa5.4□□□□□ -1.54
TREM1-202ENST00000334475 H7BZZ5 65 aa5.4□□□□□ -1.54
TREM1-202ENST00000334475 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
TREM1-202ENST00000334475 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
TREM1-202ENST00000334475 Q6ZSA8 131 aa5.39□□□□□ -1.55
TREM1-202ENST00000334475 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
TREM1-202ENST00000334475 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
TREM1-202ENST00000334475 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
TREM1-202ENST00000334475 A0A0U1RQV1 116 aa5.38□□□□□ -1.55
TREM1-202ENST00000334475 NDUFB1O75438 58 aa5.37□□□□□ -1.55
TREM1-202ENST00000334475 CD164Q04900 197 aa5.37□□□□□ -1.55
TREM1-202ENST00000334475 C5orf47Q569G3 176 aa5.37□□□□□ -1.55
TREM1-202ENST00000334475 LINC00336Q6ZUF6 198 aa5.37□□□□□ -1.55
TREM1-202ENST00000334475 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
TREM1-202ENST00000334475 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
TREM1-202ENST00000334475 KRTAP10-2P60368 255 aa5.36□□□□□ -1.55
TREM1-202ENST00000334475 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
TREM1-202ENST00000334475 MOBPQ13875 183 aa5.35□□□□□ -1.55
TREM1-202ENST00000334475 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
TREM1-202ENST00000334475 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
TREM1-202ENST00000334475 H3BPC8 53 aa5.34□□□□□ -1.55
TREM1-202ENST00000334475 DEFB116Q30KQ4 102 aa5.34□□□□□ -1.55
TREM1-202ENST00000334475 CASC2Q6XLA1 102 aa5.34□□□□□ -1.55
TREM1-202ENST00000334475 Q96NJ1 140 aa5.34□□□□□ -1.55
TREM1-202ENST00000334475 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
TREM1-202ENST00000334475 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
TREM1-202ENST00000334475 SERP1Q9Y6X1 66 aa5.33□□□□□ -1.56
TREM1-202ENST00000334475 DNAH8Q96JB1 4490 aa5.33□□□□□ -1.56
TREM1-202ENST00000334475 MMP24-AS1A0A0U1RRL7 71 aa5.32□□□□□ -1.56
TREM1-202ENST00000334475 MP68P56378 58 aa5.32□□□□□ -1.56
TREM1-202ENST00000334475 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
TREM1-202ENST00000334475 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
TREM1-202ENST00000334475 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
TREM1-202ENST00000334475 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
TREM1-202ENST00000334475 Q8N1X5 172 aa5.3□□□□□ -1.56
TREM1-202ENST00000334475 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
TREM1-202ENST00000334475 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
TREM1-202ENST00000334475 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
TREM1-202ENST00000334475 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
TREM1-202ENST00000334475 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
TREM1-202ENST00000334475 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
TREM1-202ENST00000334475 Q5XG85 94 aa5.27□□□□□ -1.57
TREM1-202ENST00000334475 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
TREM1-202ENST00000334475 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
TREM1-202ENST00000334475 H0Y9P7 68 aa5.26□□□□□ -1.57
TREM1-202ENST00000334475 C8orf87E5RJ46 101 aa5.25□□□□□ -1.57
TREM1-202ENST00000334475 TRAV22A0A0B4J277 110 aa5.24□□□□□ -1.57
TREM1-202ENST00000334475 OXTP01178 125 aa5.24□□□□□ -1.57
TREM1-202ENST00000334475 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
TREM1-202ENST00000334475 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
TREM1-202ENST00000334475 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
TREM1-202ENST00000334475 LIMD2Q9BT23 127 aa5.23□□□□□ -1.57
TREM1-202ENST00000334475 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
TREM1-202ENST00000334475 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
TREM1-202ENST00000334475 DMBT1Q9UGM3 2413 aaPredicted RBP5.22□□□□□ -1.57
TREM1-202ENST00000334475 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
TREM1-202ENST00000334475 SPANXA2-OT1Q8N9U9 137 aa5.22□□□□□ -1.57
TREM1-202ENST00000334475 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
TREM1-202ENST00000334475 A0A087X002 238 aa5.21□□□□□ -1.58
TREM1-202ENST00000334475 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
TREM1-202ENST00000334475 KRTAP13-2Q52LG2 175 aa5.21□□□□□ -1.58
TREM1-202ENST00000334475 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.58
TREM1-202ENST00000334475 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
TREM1-202ENST00000334475 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
TREM1-202ENST00000334475 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
TREM1-202ENST00000334475 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
TREM1-202ENST00000334475 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
TREM1-202ENST00000334475 NDUFS5O43920 106 aa5.16□□□□□ -1.58
TREM1-202ENST00000334475 SPINK1P00995 79 aa5.16□□□□□ -1.58
TREM1-202ENST00000334475 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
TREM1-202ENST00000334475 C1orf195Q5TG92 126 aa5.15□□□□□ -1.59
TREM1-202ENST00000334475 SPAG11AQ6PDA7 123 aa5.15□□□□□ -1.59
TREM1-202ENST00000334475 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.59
TREM1-202ENST00000334475 LOC101927531A0A1B0GV80 90 aa5.14□□□□□ -1.59
TREM1-202ENST00000334475 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
TREM1-202ENST00000334475 SMR3BP02814 79 aaPredicted RBP5.14□□□□□ -1.59
TREM1-202ENST00000334475 LINC00313P59037 77 aa5.14□□□□□ -1.59
TREM1-202ENST00000334475 Q5VSD8 79 aa5.14□□□□□ -1.59
TREM1-202ENST00000334475 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
TREM1-202ENST00000334475 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
TREM1-202ENST00000334475 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
TREM1-202ENST00000334475 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
TREM1-202ENST00000334475 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
TREM1-202ENST00000334475 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
TREM1-202ENST00000334475 TNXBP22105 4242 aa5.08□□□□□ -1.6
TREM1-202ENST00000334475 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
TREM1-202ENST00000334475 C4orf26Q17RF5 130 aa5.08□□□□□ -1.6
TREM1-202ENST00000334475 V9GYY9 64 aa5.08□□□□□ -1.6
TREM1-202ENST00000334475 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
TREM1-202ENST00000334475 PRR4Q16378 134 aa5.07□□□□□ -1.6
TREM1-202ENST00000334475 Q1T7F1 81 aa5.06□□□□□ -1.6
TREM1-202ENST00000334475 PCOTHQ58A44 107 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms