RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SPRR1AP35321 89 aa6.98□□□□□ -1.29
KPNA4-201ENST00000334256 APCP25054 2843 aa6.94□□□□□ -1.3
KPNA4-201ENST00000334256 UBR5O95071 2799 aaPredicted RBP6.93□□□□□ -1.3
KPNA4-201ENST00000334256 MAP1AP78559 2803 aaPredicted RBP6.93□□□□□ -1.3
KPNA4-201ENST00000334256 ZZEF1O43149 2961 aa6.92□□□□□ -1.3
KPNA4-201ENST00000334256 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
KPNA4-201ENST00000334256 CHD7Q9P2D1 2997 aa6.91□□□□□ -1.3
KPNA4-201ENST00000334256 ZNF292O60281 2723 aa6.91□□□□□ -1.3
KPNA4-201ENST00000334256 SPTBN5Q9NRC6 3674 aaKnown RBP6.91□□□□□ -1.3
KPNA4-201ENST00000334256 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
KPNA4-201ENST00000334256 EYSQ5T1H1 3165 aa6.9□□□□□ -1.3
KPNA4-201ENST00000334256 DSPP15924 2871 aaKnown RBP6.89□□□□□ -1.31
KPNA4-201ENST00000334256 FLNCQ14315 2725 aa6.89□□□□□ -1.31
KPNA4-201ENST00000334256 CHD9Q3L8U1 2897 aa6.87□□□□□ -1.31
KPNA4-201ENST00000334256 NBEAL2Q6ZNJ1 2754 aa6.86□□□□□ -1.31
KPNA4-201ENST00000334256 MYO15AQ9UKN7 3530 aa6.84□□□□□ -1.31
KPNA4-201ENST00000334256 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
KPNA4-201ENST00000334256 LOC400499M0QZD8 3231 aa6.83□□□□□ -1.32
KPNA4-201ENST00000334256 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
KPNA4-201ENST00000334256 KRTAP29-1A8MX34 341 aaPredicted RBP6.81□□□□□ -1.32
KPNA4-201ENST00000334256 KALRNO60229 2985 aa6.81□□□□□ -1.32
KPNA4-201ENST00000334256 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
KPNA4-201ENST00000334256 UTP20O75691 2785 aaKnown RBP6.77□□□□□ -1.33
KPNA4-201ENST00000334256 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
KPNA4-201ENST00000334256 TENM1Q9UKZ4 2725 aa6.76□□□□□ -1.33
KPNA4-201ENST00000334256 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
KPNA4-201ENST00000334256 USP34Q70CQ2 3546 aa6.74□□□□□ -1.33
KPNA4-201ENST00000334256 XP32Q5T750 250 aa6.74□□□□□ -1.33
KPNA4-201ENST00000334256 FRYLO94915 3013 aa6.73□□□□□ -1.33
KPNA4-201ENST00000334256 ADGRG4Q8IZF6 3080 aa6.7□□□□□ -1.34
KPNA4-201ENST00000334256 CELSR1Q9NYQ6 3014 aa6.69□□□□□ -1.34
KPNA4-201ENST00000334256 TACC2O95359 2948 aa6.67□□□□□ -1.34
KPNA4-201ENST00000334256 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.34
KPNA4-201ENST00000334256 HIVEP1P15822 2718 aa6.61□□□□□ -1.35
KPNA4-201ENST00000334256 H0YAA0 97 aa6.6□□□□□ -1.35
KPNA4-201ENST00000334256 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
KPNA4-201ENST00000334256 LRBAP50851 2863 aa6.59□□□□□ -1.35
KPNA4-201ENST00000334256 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
KPNA4-201ENST00000334256 DCHS1Q96JQ0 3298 aa6.55□□□□□ -1.36
KPNA4-201ENST00000334256 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
KPNA4-201ENST00000334256 PDZD2O15018 2839 aa6.51□□□□□ -1.37
KPNA4-201ENST00000334256 WDFY3Q8IZQ1 3526 aa6.51□□□□□ -1.37
KPNA4-201ENST00000334256 TENM4Q6N022 2769 aa6.49□□□□□ -1.37
KPNA4-201ENST00000334256 PKD1L1Q8TDX9 2849 aa6.48□□□□□ -1.37
KPNA4-201ENST00000334256 NF1P21359 2839 aa6.48□□□□□ -1.37
KPNA4-201ENST00000334256 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
KPNA4-201ENST00000334256 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
KPNA4-201ENST00000334256 CELSR2Q9HCU4 2923 aa6.45□□□□□ -1.38
KPNA4-201ENST00000334256 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
KPNA4-201ENST00000334256 VWFP04275 2813 aa6.42□□□□□ -1.38
KPNA4-201ENST00000334256 LAMA5O15230 3695 aa6.38□□□□□ -1.39
KPNA4-201ENST00000334256 DMXL1Q9Y485 3027 aa6.38□□□□□ -1.39
KPNA4-201ENST00000334256 ZANQ9Y493 2812 aa6.36□□□□□ -1.39
KPNA4-201ENST00000334256 ZFHX3Q15911 3703 aa6.35□□□□□ -1.39
KPNA4-201ENST00000334256 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
KPNA4-201ENST00000334256 NBEAQ8NFP9 2946 aa6.32□□□□□ -1.4
KPNA4-201ENST00000334256 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
KPNA4-201ENST00000334256 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
KPNA4-201ENST00000334256 RELNP78509 3460 aa6.29□□□□□ -1.4
KPNA4-201ENST00000334256 NIPBLQ6KC79 2804 aaeCLIP6.28□□□□□ -1.42e-8■■■■■ 28.8
KPNA4-201ENST00000334256 MUC3AQ02505 3323 aa6.25□□□□□ -1.41
KPNA4-201ENST00000334256 ITPR1Q14643 2758 aa6.23□□□□□ -1.41
KPNA4-201ENST00000334256 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
KPNA4-201ENST00000334256 SPENQ96T58 3664 aaKnown RBP6.22□□□□□ -1.41
KPNA4-201ENST00000334256 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
KPNA4-201ENST00000334256 KRTAP1-4P0C5Y4 121 aa6.19□□□□□ -1.42
KPNA4-201ENST00000334256 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
KPNA4-201ENST00000334256 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
KPNA4-201ENST00000334256 CSMD1Q96PZ7 3565 aa6.09□□□□□ -1.43
KPNA4-201ENST00000334256 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
KPNA4-201ENST00000334256 CUBNO60494 3623 aa6.07□□□□□ -1.44
KPNA4-201ENST00000334256 TGP01266 2768 aa6.04□□□□□ -1.44
KPNA4-201ENST00000334256 KRTAP10-5P60370 271 aa6□□□□□ -1.45
KPNA4-201ENST00000334256 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
KPNA4-201ENST00000334256 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
KPNA4-201ENST00000334256 COL7A1Q02388 2944 aa5.96□□□□□ -1.46
KPNA4-201ENST00000334256 SMG1Q96Q15 3661 aaKnown RBP5.92□□□□□ -1.46
KPNA4-201ENST00000334256 DMDP11532 3685 aa5.91□□□□□ -1.46
KPNA4-201ENST00000334256 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
KPNA4-201ENST00000334256 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
KPNA4-201ENST00000334256 FBN3Q75N90 2809 aa5.87□□□□□ -1.47
KPNA4-201ENST00000334256 FBN2P35556 2912 aa5.83□□□□□ -1.48
KPNA4-201ENST00000334256 INE1O15225 51 aa5.8□□□□□ -1.48
KPNA4-201ENST00000334256 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
KPNA4-201ENST00000334256 MXRA5Q9NR99 2828 aa5.75□□□□□ -1.49
KPNA4-201ENST00000334256 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
KPNA4-201ENST00000334256 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
KPNA4-201ENST00000334256 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
KPNA4-201ENST00000334256 OTOGQ6ZRI0 2925 aa5.6□□□□□ -1.51
KPNA4-201ENST00000334256 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
KPNA4-201ENST00000334256 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
KPNA4-201ENST00000334256 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
KPNA4-201ENST00000334256 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
KPNA4-201ENST00000334256 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
KPNA4-201ENST00000334256 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
KPNA4-201ENST00000334256 SPRR2EP22531 72 aa5.42□□□□□ -1.54
KPNA4-201ENST00000334256 SPRR2BP35325 72 aa5.42□□□□□ -1.54
KPNA4-201ENST00000334256 SPRR2AP35326 72 aa5.42□□□□□ -1.54
KPNA4-201ENST00000334256 TRRAPQ9Y4A5 3859 aa5.42□□□□□ -1.54
KPNA4-201ENST00000334256 FBN1P35555 2871 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms