RNA–Protein interactions for RNA: ENST00000333651.10

HMG20B-202, Transcript of high mobility group 20B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20B, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-202ENST00000333651 PCP4P48539 62 aa12.94□□□□□ -0.34
HMG20B-202ENST00000333651 SEC61BP60468 96 aaKnown RBP12.9□□□□□ -0.34
HMG20B-202ENST00000333651 Q6ZVQ6 151 aa12.9□□□□□ -0.34
HMG20B-202ENST00000333651 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.35
HMG20B-202ENST00000333651 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
HMG20B-202ENST00000333651 IGKV4-1P06312 121 aa12.89□□□□□ -0.35
HMG20B-202ENST00000333651 DEFB116Q30KQ4 102 aa12.87□□□□□ -0.35
HMG20B-202ENST00000333651 CXCL6P80162 114 aa12.85□□□□□ -0.35
HMG20B-202ENST00000333651 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
HMG20B-202ENST00000333651 NREPQ16612 68 aa12.81□□□□□ -0.36
HMG20B-202ENST00000333651 J3KT08 172 aa12.77□□□□□ -0.37
HMG20B-202ENST00000333651 RPL37P61927 97 aaKnown RBP12.76□□□□□ -0.37
HMG20B-202ENST00000333651 HIST1H4AP62805 103 aaKnown RBP12.74□□□□□ -0.37
HMG20B-202ENST00000333651 DSCR10P59022 87 aa12.73□□□□□ -0.37
HMG20B-202ENST00000333651 LINC00313P59037 77 aa12.73□□□□□ -0.37
HMG20B-202ENST00000333651 PCOTHQ58A44 107 aa12.73□□□□□ -0.37
HMG20B-202ENST00000333651 MUC2Q02817 5179 aa12.73□□□□□ -0.37
HMG20B-202ENST00000333651 MUC17Q685J3 4493 aa12.72□□□□□ -0.37
HMG20B-202ENST00000333651 IGHV6-1A0A0B4J1U7 121 aa12.72□□□□□ -0.37
HMG20B-202ENST00000333651 FAM236AA0A1B0GUQ0 79 aa12.72□□□□□ -0.37
HMG20B-202ENST00000333651 FAM236BA0A1B0GV22 79 aa12.72□□□□□ -0.37
HMG20B-202ENST00000333651 Q75L30 129 aa12.69□□□□□ -0.38
HMG20B-202ENST00000333651 A0A1B0GVX0 72 aa12.68□□□□□ -0.38
HMG20B-202ENST00000333651 BPY2O14599 106 aa12.68□□□□□ -0.38
HMG20B-202ENST00000333651 NDUFB1O75438 58 aa12.67□□□□□ -0.38
HMG20B-202ENST00000333651 ANAPC13Q9BS18 74 aa12.67□□□□□ -0.38
HMG20B-202ENST00000333651 A0A087WVE0 104 aa12.64□□□□□ -0.39
HMG20B-202ENST00000333651 NOTCH2NLQ7Z3S9 236 aa12.64□□□□□ -0.39
HMG20B-202ENST00000333651 KRTAP4-1Q9BYQ7 146 aa12.64□□□□□ -0.39
HMG20B-202ENST00000333651 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
HMG20B-202ENST00000333651 A0A0U1RQV1 116 aa12.63□□□□□ -0.39
HMG20B-202ENST00000333651 C8orf87E5RJ46 101 aa12.63□□□□□ -0.39
HMG20B-202ENST00000333651 ATP11AUNQ6ZP68 121 aa12.63□□□□□ -0.39
HMG20B-202ENST00000333651 A8MWP4 228 aa12.62□□□□□ -0.39
HMG20B-202ENST00000333651 ATOX1O00244 68 aa12.62□□□□□ -0.39
HMG20B-202ENST00000333651 A8MUU9 505 aa12.6□□□□□ -0.39
HMG20B-202ENST00000333651 KRTAP16-1A8MUX0 517 aa12.58□□□□□ -0.4
HMG20B-202ENST00000333651 PRR15Q8IV56 129 aa12.53□□□□□ -0.4
HMG20B-202ENST00000333651 C8orf17Q9NRJ1 99 aa12.51□□□□□ -0.41
HMG20B-202ENST00000333651 SMIM20Q8N5G0 67 aa12.48□□□□□ -0.41
HMG20B-202ENST00000333651 Q8N9L7 120 aa12.48□□□□□ -0.41
HMG20B-202ENST00000333651 K7EQZ3 153 aa12.46□□□□□ -0.42
HMG20B-202ENST00000333651 SERP2Q8N6R1 65 aa12.46□□□□□ -0.42
HMG20B-202ENST00000333651 COX7CP15954 63 aa12.44□□□□□ -0.42
HMG20B-202ENST00000333651 UQCRQO14949 82 aa12.43□□□□□ -0.42
HMG20B-202ENST00000333651 Q8N9P0 234 aaPredicted RBP12.39□□□□□ -0.43
HMG20B-202ENST00000333651 TRAV7A0A075B6U4 112 aa12.38□□□□□ -0.43
HMG20B-202ENST00000333651 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
HMG20B-202ENST00000333651 CCDC179H3BU77 68 aa12.36□□□□□ -0.43
HMG20B-202ENST00000333651 hDV103S1A0JD37 113 aa12.35□□□□□ -0.43
HMG20B-202ENST00000333651 HCG22E2RYF7 251 aa12.35□□□□□ -0.43
HMG20B-202ENST00000333651 TMEM254Q8TBM7 123 aa12.35□□□□□ -0.43
HMG20B-202ENST00000333651 MRPL34Q9BQ48 92 aaKnown RBP12.33□□□□□ -0.44
HMG20B-202ENST00000333651 FAT4Q6V0I7 4981 aa12.31□□□□□ -0.44
HMG20B-202ENST00000333651 ZCCHC13Q8WW36 166 aaKnown RBP12.3□□□□□ -0.44
HMG20B-202ENST00000333651 OCR1Q9BZK8 76 aa12.29□□□□□ -0.44
HMG20B-202ENST00000333651 KRTAP19-2Q3LHN2 52 aa12.26□□□□□ -0.45
HMG20B-202ENST00000333651 CASC2Q6XLA1 102 aa12.26□□□□□ -0.45
HMG20B-202ENST00000333651 WFDC13Q8IUB5 93 aa12.26□□□□□ -0.45
HMG20B-202ENST00000333651 NDUFS5O43920 106 aa12.24□□□□□ -0.45
HMG20B-202ENST00000333651 LCE2AQ5TA79 106 aaPredicted RBP12.23□□□□□ -0.45
HMG20B-202ENST00000333651 LCE2CQ5TA81 110 aa12.22□□□□□ -0.45
HMG20B-202ENST00000333651 COX6B2Q6YFQ2 88 aa12.2□□□□□ -0.46
HMG20B-202ENST00000333651 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
HMG20B-202ENST00000333651 C20orf197Q8N268 126 aa12.13□□□□□ -0.47
HMG20B-202ENST00000333651 SPINK7P58062 85 aa12.12□□□□□ -0.47
HMG20B-202ENST00000333651 C5orf47Q569G3 176 aa12.1□□□□□ -0.47
HMG20B-202ENST00000333651 HRES1P13985 223 aa12.06□□□□□ -0.48
HMG20B-202ENST00000333651 MT1HP80294 61 aa12.05□□□□□ -0.48
HMG20B-202ENST00000333651 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
HMG20B-202ENST00000333651 NDUFC1O43677 76 aa12.04□□□□□ -0.48
HMG20B-202ENST00000333651 RBM12B-AS1Q9P1G2 102 aa12.04□□□□□ -0.48
HMG20B-202ENST00000333651 Q5W150 140 aa12.03□□□□□ -0.48
HMG20B-202ENST00000333651 CYSTM1Q9H1C7 97 aa12.03□□□□□ -0.48
HMG20B-202ENST00000333651 MPLKIPQ8TAP9 179 aa12□□□□□ -0.49
HMG20B-202ENST00000333651 FAM236DA0A1B0GTK5 79 aa11.99□□□□□ -0.49
HMG20B-202ENST00000333651 H3BPC8 53 aa11.99□□□□□ -0.49
HMG20B-202ENST00000333651 FAM236CP0DP71 79 aa11.99□□□□□ -0.49
HMG20B-202ENST00000333651 TMEM258P61165 79 aa11.99□□□□□ -0.49
HMG20B-202ENST00000333651 SNURFQ9Y675 71 aa11.98□□□□□ -0.49
HMG20B-202ENST00000333651 H7BZZ5 65 aa11.96□□□□□ -0.49
HMG20B-202ENST00000333651 MP68P56378 58 aa11.96□□□□□ -0.49
HMG20B-202ENST00000333651 M0R2T5 61 aa11.94□□□□□ -0.5
HMG20B-202ENST00000333651 IGKV2D-30A0A075B6S6 120 aa11.92□□□□□ -0.5
HMG20B-202ENST00000333651 IGKV2-30P06310 120 aa11.92□□□□□ -0.5
HMG20B-202ENST00000333651 TRAV22A0A0B4J277 110 aa11.91□□□□□ -0.5
HMG20B-202ENST00000333651 C7orf65Q6ZTY9 151 aa11.9□□□□□ -0.5
HMG20B-202ENST00000333651 H0Y9P7 68 aa11.89□□□□□ -0.51
HMG20B-202ENST00000333651 FLGP20930 4061 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-202ENST00000333651 LINC00208Q96KT6 92 aa11.84□□□□□ -0.51
HMG20B-202ENST00000333651 ATP5EP56381 51 aaPredicted RBP11.81□□□□□ -0.52
HMG20B-202ENST00000333651 C1orf64Q8NEQ6 169 aa11.79□□□□□ -0.52
HMG20B-202ENST00000333651 KRTAP10-6P60371 365 aaPredicted RBP11.75□□□□□ -0.53
HMG20B-202ENST00000333651 RPS28P62857 69 aaKnown RBP11.73□□□□□ -0.53
HMG20B-202ENST00000333651 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
HMG20B-202ENST00000333651 LOC101927531A0A1B0GV80 90 aa11.7□□□□□ -0.54
HMG20B-202ENST00000333651 SPANXA2-OT1Q8N9U9 137 aa11.68□□□□□ -0.54
HMG20B-202ENST00000333651 C4orf26Q17RF5 130 aa11.67□□□□□ -0.54
HMG20B-202ENST00000333651 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
HMG20B-202ENST00000333651 CYP4F30PQ9H0H9 118 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms