RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 NOTCH2NLQ7Z3S9 236 aa12.06□□□□□ -0.48
LINC01006-201ENST00000333319 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
LINC01006-201ENST00000333319 MRPL34Q9BQ48 92 aaKnown RBP12.03□□□□□ -0.48
LINC01006-201ENST00000333319 HYDINQ4G0P3 5121 aa12.01□□□□□ -0.49
LINC01006-201ENST00000333319 PKD1P98161 4303 aa12.01□□□□□ -0.49
LINC01006-201ENST00000333319 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
LINC01006-201ENST00000333319 KRTAP10-1P60331 282 aa12□□□□□ -0.49
LINC01006-201ENST00000333319 CD164Q04900 197 aa11.99□□□□□ -0.49
LINC01006-201ENST00000333319 Q6ZSA8 131 aa11.98□□□□□ -0.49
LINC01006-201ENST00000333319 LRP1BQ9NZR2 4599 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 Q1T7F1 81 aa11.96□□□□□ -0.49
LINC01006-201ENST00000333319 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
LINC01006-201ENST00000333319 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
LINC01006-201ENST00000333319 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
LINC01006-201ENST00000333319 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
LINC01006-201ENST00000333319 PSPHP1O15172 72 aa11.84□□□□□ -0.51
LINC01006-201ENST00000333319 Q5W150 140 aa11.84□□□□□ -0.51
LINC01006-201ENST00000333319 VPS13BQ7Z7G8 4022 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 C8orf87E5RJ46 101 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 COA5Q86WW8 74 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 KRTAP1-4P0C5Y4 121 aa11.8□□□□□ -0.52
LINC01006-201ENST00000333319 C1orf195Q5TG92 126 aa11.8□□□□□ -0.52
LINC01006-201ENST00000333319 V9GYY9 64 aa11.79□□□□□ -0.52
LINC01006-201ENST00000333319 LINC00313P59037 77 aa11.78□□□□□ -0.52
LINC01006-201ENST00000333319 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
LINC01006-201ENST00000333319 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.52
LINC01006-201ENST00000333319 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
LINC01006-201ENST00000333319 A8MUN3 132 aa11.75□□□□□ -0.53
LINC01006-201ENST00000333319 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.54
LINC01006-201ENST00000333319 LIMD2Q9BT23 127 aa11.7□□□□□ -0.54
LINC01006-201ENST00000333319 PKHD1P08F94 4074 aa11.68□□□□□ -0.54
LINC01006-201ENST00000333319 HRES1P13985 223 aa11.67□□□□□ -0.54
LINC01006-201ENST00000333319 Q5VV11 94 aa11.67□□□□□ -0.54
LINC01006-201ENST00000333319 SACSQ9NZJ4 4579 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 TYMSOSQ8TAI1 123 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.55
LINC01006-201ENST00000333319 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
LINC01006-201ENST00000333319 PRR15LQ9BU68 103 aa11.63□□□□□ -0.55
LINC01006-201ENST00000333319 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
LINC01006-201ENST00000333319 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.55
LINC01006-201ENST00000333319 SPINK1P00995 79 aa11.57□□□□□ -0.56
LINC01006-201ENST00000333319 CHKB-CPT1BH3BT56 60 aa11.56□□□□□ -0.56
LINC01006-201ENST00000333319 DYNC1H1Q14204 4646 aaKnown RBP11.54□□□□□ -0.56
LINC01006-201ENST00000333319 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
LINC01006-201ENST00000333319 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
LINC01006-201ENST00000333319 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.56
LINC01006-201ENST00000333319 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
LINC01006-201ENST00000333319 ACYP2P14621 99 aa11.51□□□□□ -0.57
LINC01006-201ENST00000333319 Q75L30 129 aa11.49□□□□□ -0.57
LINC01006-201ENST00000333319 LINC00304Q8N9R0 145 aa11.48□□□□□ -0.57
LINC01006-201ENST00000333319 A8MU10 97 aa11.47□□□□□ -0.57
LINC01006-201ENST00000333319 DMAC1Q96GE9 116 aa11.47□□□□□ -0.57
LINC01006-201ENST00000333319 IGKV2D-30A0A075B6S6 120 aa11.43□□□□□ -0.58
LINC01006-201ENST00000333319 A0A1B0GVY2 172 aa11.42□□□□□ -0.58
LINC01006-201ENST00000333319 FAT1Q14517 4588 aa11.41□□□□□ -0.58
LINC01006-201ENST00000333319 A6NED7 52 aa11.41□□□□□ -0.58
LINC01006-201ENST00000333319 RPS29P62273 56 aaKnown RBP11.4□□□□□ -0.58
LINC01006-201ENST00000333319 APOBP04114 4563 aaKnown RBP11.38□□□□□ -0.59
LINC01006-201ENST00000333319 LCA10Q71F78 164 aa11.35□□□□□ -0.59
LINC01006-201ENST00000333319 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
LINC01006-201ENST00000333319 RYR2Q92736 4967 aa11.28□□□□□ -0.6
LINC01006-201ENST00000333319 SPINK7P58062 85 aa11.28□□□□□ -0.6
LINC01006-201ENST00000333319 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.6
LINC01006-201ENST00000333319 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
LINC01006-201ENST00000333319 CDC42SE1Q9NRR8 79 aa11.26□□□□□ -0.61
LINC01006-201ENST00000333319 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
LINC01006-201ENST00000333319 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
LINC01006-201ENST00000333319 PMAIP1Q13794 54 aa11.22□□□□□ -0.61
LINC01006-201ENST00000333319 KMT2CQ8NEZ4 4911 aaKnown RBP11.2□□□□□ -0.62
LINC01006-201ENST00000333319 ATP11AUNQ6ZP68 121 aa11.2□□□□□ -0.62
LINC01006-201ENST00000333319 A0A1B0GU69 56 aa11.15□□□□□ -0.62
LINC01006-201ENST00000333319 C20orf166-AS1Q96NR2 134 aa11.15□□□□□ -0.62
LINC01006-201ENST00000333319 A8MUU9 505 aa11.14□□□□□ -0.63
LINC01006-201ENST00000333319 Q8N1X5 172 aa11.14□□□□□ -0.63
LINC01006-201ENST00000333319 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
LINC01006-201ENST00000333319 A6NN06 94 aa11.01□□□□□ -0.65
LINC01006-201ENST00000333319 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
LINC01006-201ENST00000333319 FAT3Q8TDW7 4589 aa10.95□□□□□ -0.66
LINC01006-201ENST00000333319 TNXBP22105 4242 aa10.95□□□□□ -0.66
LINC01006-201ENST00000333319 UQCR11O14957 56 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 KRTAP3-1Q9BYR8 98 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 HSPG2P98160 4391 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 Q5VSD8 79 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
LINC01006-201ENST00000333319 MIR22HGQ0VDD5 57 aa10.88□□□□□ -0.67
LINC01006-201ENST00000333319 RYR3Q15413 4870 aa10.85□□□□□ -0.67
LINC01006-201ENST00000333319 SEC61GP60059 68 aa10.84□□□□□ -0.67
LINC01006-201ENST00000333319 RYR1P21817 5038 aa10.8□□□□□ -0.68
LINC01006-201ENST00000333319 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
LINC01006-201ENST00000333319 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
LINC01006-201ENST00000333319 KRTAP17-1Q9BYP8 105 aa10.74□□□□□ -0.69
LINC01006-201ENST00000333319 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
LINC01006-201ENST00000333319 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
LINC01006-201ENST00000333319 XP32Q5T750 250 aa10.66□□□□□ -0.7
LINC01006-201ENST00000333319 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms