RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 NOTCH2NLQ7Z3S9 236 aa12.06□□□□□ -0.48
LINC01006-201ENST00000333319 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
LINC01006-201ENST00000333319 MRPL34Q9BQ48 92 aaKnown RBP12.03□□□□□ -0.48
LINC01006-201ENST00000333319 HYDINQ4G0P3 5121 aa12.01□□□□□ -0.49
LINC01006-201ENST00000333319 PKD1P98161 4303 aa12.01□□□□□ -0.49
LINC01006-201ENST00000333319 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
LINC01006-201ENST00000333319 KRTAP10-1P60331 282 aa12□□□□□ -0.49
LINC01006-201ENST00000333319 CD164Q04900 197 aa11.99□□□□□ -0.49
LINC01006-201ENST00000333319 Q6ZSA8 131 aa11.98□□□□□ -0.49
LINC01006-201ENST00000333319 LRP1BQ9NZR2 4599 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
LINC01006-201ENST00000333319 Q1T7F1 81 aa11.96□□□□□ -0.49
LINC01006-201ENST00000333319 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
LINC01006-201ENST00000333319 KRTAP13-2Q52LG2 175 aa11.9□□□□□ -0.5
LINC01006-201ENST00000333319 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
LINC01006-201ENST00000333319 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
LINC01006-201ENST00000333319 PSPHP1O15172 72 aa11.84□□□□□ -0.51
LINC01006-201ENST00000333319 Q5W150 140 aa11.84□□□□□ -0.51
LINC01006-201ENST00000333319 VPS13BQ7Z7G8 4022 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 C8orf87E5RJ46 101 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 COA5Q86WW8 74 aa11.83□□□□□ -0.52
LINC01006-201ENST00000333319 KRTAP1-4P0C5Y4 121 aa11.8□□□□□ -0.52
LINC01006-201ENST00000333319 C1orf195Q5TG92 126 aa11.8□□□□□ -0.52
LINC01006-201ENST00000333319 V9GYY9 64 aa11.79□□□□□ -0.52
LINC01006-201ENST00000333319 LINC00313P59037 77 aa11.78□□□□□ -0.52
LINC01006-201ENST00000333319 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
LINC01006-201ENST00000333319 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.52
LINC01006-201ENST00000333319 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
LINC01006-201ENST00000333319 A8MUN3 132 aa11.75□□□□□ -0.53
LINC01006-201ENST00000333319 PLA2G1BP04054 148 aaKnown RBP11.71□□□□□ -0.54
LINC01006-201ENST00000333319 LIMD2Q9BT23 127 aa11.7□□□□□ -0.54
LINC01006-201ENST00000333319 PKHD1P08F94 4074 aa11.68□□□□□ -0.54
LINC01006-201ENST00000333319 HRES1P13985 223 aa11.67□□□□□ -0.54
LINC01006-201ENST00000333319 Q5VV11 94 aa11.67□□□□□ -0.54
LINC01006-201ENST00000333319 SACSQ9NZJ4 4579 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 TYMSOSQ8TAI1 123 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
LINC01006-201ENST00000333319 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.55
LINC01006-201ENST00000333319 FAM229AH3BQW9 127 aa11.64□□□□□ -0.55
LINC01006-201ENST00000333319 PRR15LQ9BU68 103 aa11.63□□□□□ -0.55
LINC01006-201ENST00000333319 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
LINC01006-201ENST00000333319 SPAG11AQ6PDA7 123 aa11.58□□□□□ -0.55
LINC01006-201ENST00000333319 SPINK1P00995 79 aa11.57□□□□□ -0.56
LINC01006-201ENST00000333319 CHKB-CPT1BH3BT56 60 aa11.56□□□□□ -0.56
LINC01006-201ENST00000333319 DYNC1H1Q14204 4646 aaKnown RBP11.54□□□□□ -0.56
LINC01006-201ENST00000333319 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
LINC01006-201ENST00000333319 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
LINC01006-201ENST00000333319 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.56
LINC01006-201ENST00000333319 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
LINC01006-201ENST00000333319 ACYP2P14621 99 aa11.51□□□□□ -0.57
LINC01006-201ENST00000333319 Q75L30 129 aa11.49□□□□□ -0.57
LINC01006-201ENST00000333319 LINC00304Q8N9R0 145 aa11.48□□□□□ -0.57
LINC01006-201ENST00000333319 A8MU10 97 aa11.47□□□□□ -0.57
LINC01006-201ENST00000333319 DMAC1Q96GE9 116 aa11.47□□□□□ -0.57
LINC01006-201ENST00000333319 IGKV2D-30A0A075B6S6 120 aa11.43□□□□□ -0.58
LINC01006-201ENST00000333319 A0A1B0GVY2 172 aa11.42□□□□□ -0.58
LINC01006-201ENST00000333319 FAT1Q14517 4588 aa11.41□□□□□ -0.58
LINC01006-201ENST00000333319 A6NED7 52 aa11.41□□□□□ -0.58
LINC01006-201ENST00000333319 RPS29P62273 56 aaKnown RBP11.4□□□□□ -0.58
LINC01006-201ENST00000333319 APOBP04114 4563 aaKnown RBP11.38□□□□□ -0.59
LINC01006-201ENST00000333319 LCA10Q71F78 164 aa11.35□□□□□ -0.59
LINC01006-201ENST00000333319 KRTAP10-4P60372 401 aaPredicted RBP11.33□□□□□ -0.6
LINC01006-201ENST00000333319 RYR2Q92736 4967 aa11.28□□□□□ -0.6
LINC01006-201ENST00000333319 SPINK7P58062 85 aa11.28□□□□□ -0.6
LINC01006-201ENST00000333319 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.6
LINC01006-201ENST00000333319 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
LINC01006-201ENST00000333319 CDC42SE1Q9NRR8 79 aa11.26□□□□□ -0.61
LINC01006-201ENST00000333319 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
LINC01006-201ENST00000333319 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
LINC01006-201ENST00000333319 PMAIP1Q13794 54 aa11.22□□□□□ -0.61
LINC01006-201ENST00000333319 KMT2CQ8NEZ4 4911 aaKnown RBP11.2□□□□□ -0.62
LINC01006-201ENST00000333319 ATP11AUNQ6ZP68 121 aa11.2□□□□□ -0.62
LINC01006-201ENST00000333319 A0A1B0GU69 56 aa11.15□□□□□ -0.62
LINC01006-201ENST00000333319 C20orf166-AS1Q96NR2 134 aa11.15□□□□□ -0.62
LINC01006-201ENST00000333319 A8MUU9 505 aa11.14□□□□□ -0.63
LINC01006-201ENST00000333319 Q8N1X5 172 aa11.14□□□□□ -0.63
LINC01006-201ENST00000333319 FLG2Q5D862 2391 aaPredicted RBP11.04□□□□□ -0.64
LINC01006-201ENST00000333319 A6NN06 94 aa11.01□□□□□ -0.65
LINC01006-201ENST00000333319 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
LINC01006-201ENST00000333319 FAT3Q8TDW7 4589 aa10.95□□□□□ -0.66
LINC01006-201ENST00000333319 TNXBP22105 4242 aa10.95□□□□□ -0.66
LINC01006-201ENST00000333319 UQCR11O14957 56 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 KRTAP3-1Q9BYR8 98 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 HSPG2P98160 4391 aa10.92□□□□□ -0.66
LINC01006-201ENST00000333319 Q5VSD8 79 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
LINC01006-201ENST00000333319 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
LINC01006-201ENST00000333319 MIR22HGQ0VDD5 57 aa10.88□□□□□ -0.67
LINC01006-201ENST00000333319 RYR3Q15413 4870 aa10.85□□□□□ -0.67
LINC01006-201ENST00000333319 SEC61GP60059 68 aa10.84□□□□□ -0.67
LINC01006-201ENST00000333319 RYR1P21817 5038 aa10.8□□□□□ -0.68
LINC01006-201ENST00000333319 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
LINC01006-201ENST00000333319 COX6B2Q6YFQ2 88 aa10.76□□□□□ -0.69
LINC01006-201ENST00000333319 KRTAP17-1Q9BYP8 105 aa10.74□□□□□ -0.69
LINC01006-201ENST00000333319 MYCBP2O75592 4640 aa10.69□□□□□ -0.7
LINC01006-201ENST00000333319 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
LINC01006-201ENST00000333319 XP32Q5T750 250 aa10.66□□□□□ -0.7
LINC01006-201ENST00000333319 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms