RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 MUC3AQ02505 3323 aa6.3□□□□□ -1.4
CLN8-201ENST00000331222 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
CLN8-201ENST00000331222 ROMO1P60602 79 aa6.29□□□□□ -1.4
CLN8-201ENST00000331222 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
CLN8-201ENST00000331222 LCE6AA0A183 80 aa6.27□□□□□ -1.41
CLN8-201ENST00000331222 Q5VV11 94 aa6.27□□□□□ -1.41
CLN8-201ENST00000331222 FLNCQ14315 2725 aa6.27□□□□□ -1.41
CLN8-201ENST00000331222 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
CLN8-201ENST00000331222 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
CLN8-201ENST00000331222 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
CLN8-201ENST00000331222 PANO1I0J062 215 aa6.25□□□□□ -1.41
CLN8-201ENST00000331222 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
CLN8-201ENST00000331222 A0A087X002 238 aa6.23□□□□□ -1.41
CLN8-201ENST00000331222 FBN2P35556 2912 aa6.23□□□□□ -1.41
CLN8-201ENST00000331222 C20orf166-AS1Q96NR2 134 aa6.22□□□□□ -1.41
CLN8-201ENST00000331222 Q6ZR54 194 aa6.22□□□□□ -1.41
CLN8-201ENST00000331222 KMT2BQ9UMN6 2715 aaPredicted RBP6.22□□□□□ -1.41
CLN8-201ENST00000331222 ZANQ9Y493 2812 aa6.21□□□□□ -1.42
CLN8-201ENST00000331222 Q5XG85 94 aa6.2□□□□□ -1.42
CLN8-201ENST00000331222 SPRR1AP35321 89 aa6.19□□□□□ -1.42
CLN8-201ENST00000331222 NBPF19A0A087WUL8 3843 aa6.18□□□□□ -1.42
CLN8-201ENST00000331222 NIPBLQ6KC79 2804 aaeCLIP6.17□□□□□ -1.42
CLN8-201ENST00000331222 CELSR1Q9NYQ6 3014 aa6.17□□□□□ -1.42
CLN8-201ENST00000331222 OXTP01178 125 aa6.17□□□□□ -1.42
CLN8-201ENST00000331222 A8MU10 97 aa6.15□□□□□ -1.43
CLN8-201ENST00000331222 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
CLN8-201ENST00000331222 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
CLN8-201ENST00000331222 SMG1Q96Q15 3661 aaKnown RBP6.14□□□□□ -1.43
CLN8-201ENST00000331222 NF1P21359 2839 aa6.13□□□□□ -1.43
CLN8-201ENST00000331222 A8MUU9 505 aa6.13□□□□□ -1.43
CLN8-201ENST00000331222 SPENQ96T58 3664 aaKnown RBP6.13□□□□□ -1.43
CLN8-201ENST00000331222 SPRR1BP22528 89 aa6.06□□□□□ -1.44
CLN8-201ENST00000331222 KRTAP11-1Q8IUC1 163 aa6.06□□□□□ -1.44
CLN8-201ENST00000331222 A0A1B0GVY2 172 aa6.05□□□□□ -1.44
CLN8-201ENST00000331222 ZFHX3Q15911 3703 aa6.02□□□□□ -1.45
CLN8-201ENST00000331222 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
CLN8-201ENST00000331222 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
CLN8-201ENST00000331222 TENM1Q9UKZ4 2725 aa5.95□□□□□ -1.46
CLN8-201ENST00000331222 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
CLN8-201ENST00000331222 HRNRQ86YZ3 2850 aaPredicted RBP5.94□□□□□ -1.46
CLN8-201ENST00000331222 TENM4Q6N022 2769 aa5.94□□□□□ -1.46
CLN8-201ENST00000331222 KRTAP4-16G5E9R7 235 aaPredicted RBP5.93□□□□□ -1.46
CLN8-201ENST00000331222 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
CLN8-201ENST00000331222 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
CLN8-201ENST00000331222 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.47
CLN8-201ENST00000331222 TNP1P09430 55 aa5.89□□□□□ -1.47
CLN8-201ENST00000331222 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
CLN8-201ENST00000331222 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
CLN8-201ENST00000331222 KRTAP13-2Q52LG2 175 aa5.88□□□□□ -1.47
CLN8-201ENST00000331222 VWFP04275 2813 aa5.88□□□□□ -1.47
CLN8-201ENST00000331222 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
CLN8-201ENST00000331222 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
CLN8-201ENST00000331222 MXRA5Q9NR99 2828 aa5.81□□□□□ -1.48
CLN8-201ENST00000331222 PDZD2O15018 2839 aa5.8□□□□□ -1.48
CLN8-201ENST00000331222 TENM3Q9P273 2699 aa5.76□□□□□ -1.49
CLN8-201ENST00000331222 KRTAP10-10P60014 251 aa5.75□□□□□ -1.49
CLN8-201ENST00000331222 ASB16-AS1Q495Z4 193 aa5.73□□□□□ -1.49
CLN8-201ENST00000331222 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
CLN8-201ENST00000331222 A6NN06 94 aa5.72□□□□□ -1.49
CLN8-201ENST00000331222 FBN1P35555 2871 aaKnown RBP5.7□□□□□ -1.5
CLN8-201ENST00000331222 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
CLN8-201ENST00000331222 XP32Q5T750 250 aa5.64□□□□□ -1.51
CLN8-201ENST00000331222 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
CLN8-201ENST00000331222 TENM2Q9NT68 2774 aa5.62□□□□□ -1.51
CLN8-201ENST00000331222 VPS13CQ709C8 3753 aa5.6□□□□□ -1.51
CLN8-201ENST00000331222 TGP01266 2768 aa5.57□□□□□ -1.52
CLN8-201ENST00000331222 BSNQ9UPA5 3926 aa5.57□□□□□ -1.52
CLN8-201ENST00000331222 P0C880 135 aa5.56□□□□□ -1.52
CLN8-201ENST00000331222 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
CLN8-201ENST00000331222 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
CLN8-201ENST00000331222 H0YAA0 97 aa5.52□□□□□ -1.53
CLN8-201ENST00000331222 COL7A1Q02388 2944 aa5.5□□□□□ -1.53
CLN8-201ENST00000331222 CSMD3Q7Z407 3707 aa5.5□□□□□ -1.53
CLN8-201ENST00000331222 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
CLN8-201ENST00000331222 KRTAP21-3Q3LHN1 58 aa5.45□□□□□ -1.54
CLN8-201ENST00000331222 PP632Q6XCG6 107 aa5.45□□□□□ -1.54
CLN8-201ENST00000331222 OTOGQ6ZRI0 2925 aa5.43□□□□□ -1.54
CLN8-201ENST00000331222 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
CLN8-201ENST00000331222 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
CLN8-201ENST00000331222 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
CLN8-201ENST00000331222 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
CLN8-201ENST00000331222 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
CLN8-201ENST00000331222 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
CLN8-201ENST00000331222 CRCT1Q9UGL9 99 aa5.27□□□□□ -1.57
CLN8-201ENST00000331222 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
CLN8-201ENST00000331222 AKAP9Q99996 3911 aa5.1□□□□□ -1.59
CLN8-201ENST00000331222 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
CLN8-201ENST00000331222 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
CLN8-201ENST00000331222 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
CLN8-201ENST00000331222 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.62
CLN8-201ENST00000331222 HUWE1Q7Z6Z7 4374 aaKnown RBP4.85□□□□□ -1.63
CLN8-201ENST00000331222 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
CLN8-201ENST00000331222 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
CLN8-201ENST00000331222 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
CLN8-201ENST00000331222 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
CLN8-201ENST00000331222 FRAS1Q86XX4 4008 aa4.67□□□□□ -1.66
CLN8-201ENST00000331222 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
CLN8-201ENST00000331222 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
CLN8-201ENST00000331222 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
CLN8-201ENST00000331222 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms