RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 KRTAP29-1A8MX34 341 aaPredicted RBP3.27□□□□□ -1.89
SDR42E1-201ENST00000328945 MXRA5Q9NR99 2828 aa3.26□□□□□ -1.89
SDR42E1-201ENST00000328945 BOD1L1Q8NFC6 3051 aa3.26□□□□□ -1.89
SDR42E1-201ENST00000328945 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
SDR42E1-201ENST00000328945 BRCA2P51587 3418 aa3.25□□□□□ -1.89
SDR42E1-201ENST00000328945 ADGRG4Q8IZF6 3080 aa3.24□□□□□ -1.89
SDR42E1-201ENST00000328945 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SDR42E1-201ENST00000328945 CELSR1Q9NYQ6 3014 aa3.23□□□□□ -1.89
SDR42E1-201ENST00000328945 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
SDR42E1-201ENST00000328945 ATMQ13315 3056 aa3.22□□□□□ -1.89
SDR42E1-201ENST00000328945 A8MU10 97 aa3.21□□□□□ -1.89
SDR42E1-201ENST00000328945 COL7A1Q02388 2944 aa3.21□□□□□ -1.89
SDR42E1-201ENST00000328945 M0QZ58 72 aa3.21□□□□□ -1.9
SDR42E1-201ENST00000328945 DNAH14Q0VDD8 3507 aa3.2□□□□□ -1.9
SDR42E1-201ENST00000328945 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
SDR42E1-201ENST00000328945 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
SDR42E1-201ENST00000328945 HRNRQ86YZ3 2850 aaPredicted RBP3.19□□□□□ -1.9
SDR42E1-201ENST00000328945 CELSR3Q9NYQ7 3312 aa3.19□□□□□ -1.9
SDR42E1-201ENST00000328945 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SDR42E1-201ENST00000328945 PANO1I0J062 215 aa3.18□□□□□ -1.9
SDR42E1-201ENST00000328945 SPTBN5Q9NRC6 3674 aaKnown RBP3.18□□□□□ -1.9
SDR42E1-201ENST00000328945 UNC80Q8N2C7 3258 aa3.17□□□□□ -1.9
SDR42E1-201ENST00000328945 COL6A3P12111 3177 aa3.17□□□□□ -1.9
SDR42E1-201ENST00000328945 USP34Q70CQ2 3546 aa3.17□□□□□ -1.9
SDR42E1-201ENST00000328945 SZT2Q5T011 3432 aa3.16□□□□□ -1.9
SDR42E1-201ENST00000328945 A8MUU9 505 aa3.16□□□□□ -1.9
SDR42E1-201ENST00000328945 MEGF8Q7Z7M0 2845 aa3.16□□□□□ -1.9
SDR42E1-201ENST00000328945 KRTAP10-2P60368 255 aa3.15□□□□□ -1.9
SDR42E1-201ENST00000328945 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
SDR42E1-201ENST00000328945 CDH23Q9H251 3354 aa3.13□□□□□ -1.91
SDR42E1-201ENST00000328945 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
SDR42E1-201ENST00000328945 VCANP13611 3396 aa3.11□□□□□ -1.91
SDR42E1-201ENST00000328945 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
SDR42E1-201ENST00000328945 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
SDR42E1-201ENST00000328945 ZFHX3Q15911 3703 aa3.1□□□□□ -1.91
SDR42E1-201ENST00000328945 CFAP47Q6ZTR5 3102 aa3.09□□□□□ -1.91
SDR42E1-201ENST00000328945 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
SDR42E1-201ENST00000328945 WDFY3Q8IZQ1 3526 aa3.06□□□□□ -1.92
SDR42E1-201ENST00000328945 NBPF19A0A087WUL8 3843 aa3.05□□□□□ -1.92
SDR42E1-201ENST00000328945 EYSQ5T1H1 3165 aa3.05□□□□□ -1.92
SDR42E1-201ENST00000328945 SPEGQ15772 3267 aa3.04□□□□□ -1.92
SDR42E1-201ENST00000328945 RPS29P62273 56 aaKnown RBP3.03□□□□□ -1.93
SDR42E1-201ENST00000328945 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.93
SDR42E1-201ENST00000328945 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
SDR42E1-201ENST00000328945 FBN3Q75N90 2809 aa3.01□□□□□ -1.93
SDR42E1-201ENST00000328945 TNP1P09430 55 aa3□□□□□ -1.93
SDR42E1-201ENST00000328945 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
SDR42E1-201ENST00000328945 H0YAA0 97 aa2.99□□□□□ -1.93
SDR42E1-201ENST00000328945 P0C880 135 aa2.99□□□□□ -1.93
SDR42E1-201ENST00000328945 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
SDR42E1-201ENST00000328945 DMDP11532 3685 aa2.97□□□□□ -1.93
SDR42E1-201ENST00000328945 MYO15AQ9UKN7 3530 aa2.97□□□□□ -1.93
SDR42E1-201ENST00000328945 LAMA5O15230 3695 aa2.95□□□□□ -1.94
SDR42E1-201ENST00000328945 OTOGQ6ZRI0 2925 aa2.95□□□□□ -1.94
SDR42E1-201ENST00000328945 PRO2289Q9P1D8 64 aa2.94□□□□□ -1.94
SDR42E1-201ENST00000328945 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
SDR42E1-201ENST00000328945 ASPMQ8IZT6 3477 aa2.92□□□□□ -1.94
SDR42E1-201ENST00000328945 KRTAP21-3Q3LHN1 58 aa2.91□□□□□ -1.94
SDR42E1-201ENST00000328945 Q6ZRN7 208 aaPredicted RBP2.91□□□□□ -1.94
SDR42E1-201ENST00000328945 LOC400499M0QZD8 3231 aa2.89□□□□□ -1.95
SDR42E1-201ENST00000328945 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
SDR42E1-201ENST00000328945 SPENQ96T58 3664 aaKnown RBP2.88□□□□□ -1.95
SDR42E1-201ENST00000328945 MUC3AQ02505 3323 aa2.88□□□□□ -1.95
SDR42E1-201ENST00000328945 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
SDR42E1-201ENST00000328945 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
SDR42E1-201ENST00000328945 DCHS1Q96JQ0 3298 aa2.85□□□□□ -1.95
SDR42E1-201ENST00000328945 TRRAPQ9Y4A5 3859 aa2.85□□□□□ -1.95
SDR42E1-201ENST00000328945 KRTAP10-10P60014 251 aa2.84□□□□□ -1.96
SDR42E1-201ENST00000328945 AKAP9Q99996 3911 aa2.83□□□□□ -1.96
SDR42E1-201ENST00000328945 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
SDR42E1-201ENST00000328945 RELNP78509 3460 aa2.79□□□□□ -1.96
SDR42E1-201ENST00000328945 TPRXLQ17RH7 258 aa2.77□□□□□ -1.97
SDR42E1-201ENST00000328945 BSNQ9UPA5 3926 aa2.77□□□□□ -1.97
SDR42E1-201ENST00000328945 SMG1Q96Q15 3661 aaKnown RBP2.77□□□□□ -1.97
SDR42E1-201ENST00000328945 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
SDR42E1-201ENST00000328945 XP32Q5T750 250 aa2.76□□□□□ -1.97
SDR42E1-201ENST00000328945 ANK3Q12955 4377 aaKnown RBP2.76□□□□□ -1.97
SDR42E1-201ENST00000328945 KRTAP1-4P0C5Y4 121 aa2.75□□□□□ -1.97
SDR42E1-201ENST00000328945 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
SDR42E1-201ENST00000328945 DNAH1Q9P2D7 4330 aa2.73□□□□□ -1.97
SDR42E1-201ENST00000328945 LYSTQ99698 3801 aa2.72□□□□□ -1.97
SDR42E1-201ENST00000328945 KRTAP15-1Q3LI76 137 aa2.71□□□□□ -1.98
SDR42E1-201ENST00000328945 KRTAP13-4Q3LI77 160 aa2.71□□□□□ -1.98
SDR42E1-201ENST00000328945 CSMD1Q96PZ7 3565 aa2.71□□□□□ -1.98
SDR42E1-201ENST00000328945 INE1O15225 51 aa2.69□□□□□ -1.98
SDR42E1-201ENST00000328945 DNAH3Q8TD57 4116 aa2.68□□□□□ -1.98
SDR42E1-201ENST00000328945 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
SDR42E1-201ENST00000328945 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
SDR42E1-201ENST00000328945 DNAH7Q8WXX0 4024 aa2.65□□□□□ -1.99
SDR42E1-201ENST00000328945 ANK2Q01484 3957 aa2.64□□□□□ -1.99
SDR42E1-201ENST00000328945 KRTAP23-1A1A580 65 aa2.63□□□□□ -1.99
SDR42E1-201ENST00000328945 SVEP1Q4LDE5 3571 aa2.63□□□□□ -1.99
SDR42E1-201ENST00000328945 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
SDR42E1-201ENST00000328945 CUBNO60494 3623 aa2.61□□□□□ -1.99
SDR42E1-201ENST00000328945 KRTAP3-1Q9BYR8 98 aa2.59□□□□□ -2
SDR42E1-201ENST00000328945 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
SDR42E1-201ENST00000328945 CMYA5Q8N3K9 4069 aa2.58□□□□□ -2
SDR42E1-201ENST00000328945 CSMD2Q7Z408 3487 aa2.57□□□□□ -2
SDR42E1-201ENST00000328945 HECTD4Q9Y4D8 3996 aa2.55□□□□□ -2
SDR42E1-201ENST00000328945 CSMD3Q7Z407 3707 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms