RNA–Protein interactions for RNA: ENST00000326577.8

TNFRSF12A-201, Transcript of TNF receptor superfamily member 12A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF12A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-201ENST00000326577 TMA7Q9Y2S6 64 aaKnown RBP12.08□□□□□ -0.48
TNFRSF12A-201ENST00000326577 C9JAW5 83 aa12.04□□□□□ -0.48
TNFRSF12A-201ENST00000326577 C21orf62-AS1Q17RA5 79 aa12.04□□□□□ -0.48
TNFRSF12A-201ENST00000326577 J3KT08 172 aa12.02□□□□□ -0.49
TNFRSF12A-201ENST00000326577 Q6ZQT0 140 aa11.99□□□□□ -0.49
TNFRSF12A-201ENST00000326577 MT2AP02795 61 aa11.96□□□□□ -0.49
TNFRSF12A-201ENST00000326577 ZCCHC13Q8WW36 166 aaKnown RBP11.96□□□□□ -0.49
TNFRSF12A-201ENST00000326577 NDUFB1O75438 58 aa11.94□□□□□ -0.5
TNFRSF12A-201ENST00000326577 ATXN8Q156A1 80 aa11.92□□□□□ -0.5
TNFRSF12A-201ENST00000326577 MTURNQ8N3F0 131 aa11.92□□□□□ -0.5
TNFRSF12A-201ENST00000326577 JMJD7-PLA2G4BH0Y9G9 81 aa11.91□□□□□ -0.5
TNFRSF12A-201ENST00000326577 USH2AO75445 5202 aa11.91□□□□□ -0.5
TNFRSF12A-201ENST00000326577 M0R143 59 aa11.89□□□□□ -0.51
TNFRSF12A-201ENST00000326577 SPINK7P58062 85 aa11.89□□□□□ -0.51
TNFRSF12A-201ENST00000326577 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
TNFRSF12A-201ENST00000326577 A0A1B0GW54 56 aa11.88□□□□□ -0.51
TNFRSF12A-201ENST00000326577 Q8N9P0 234 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF12A-201ENST00000326577 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
TNFRSF12A-201ENST00000326577 MT1FP04733 61 aa11.86□□□□□ -0.51
TNFRSF12A-201ENST00000326577 C8orf17Q9NRJ1 99 aa11.85□□□□□ -0.51
TNFRSF12A-201ENST00000326577 A8MWP4 228 aa11.84□□□□□ -0.51
TNFRSF12A-201ENST00000326577 PDE6GP18545 87 aa11.84□□□□□ -0.51
TNFRSF12A-201ENST00000326577 KRTAP10-10P60014 251 aa11.84□□□□□ -0.51
TNFRSF12A-201ENST00000326577 SSPOA2VEC9 5147 aa11.83□□□□□ -0.52
TNFRSF12A-201ENST00000326577 IGKV3D-7A0A0C4DH55 119 aa11.8□□□□□ -0.52
TNFRSF12A-201ENST00000326577 LYRM7Q5U5X0 104 aa11.8□□□□□ -0.52
TNFRSF12A-201ENST00000326577 KRTAP9-3Q9BYQ3 159 aa11.79□□□□□ -0.52
TNFRSF12A-201ENST00000326577 C14orf132Q9NPU4 83 aa11.79□□□□□ -0.52
TNFRSF12A-201ENST00000326577 LCE2BO14633 110 aa11.77□□□□□ -0.53
TNFRSF12A-201ENST00000326577 Q6ZVQ6 151 aa11.75□□□□□ -0.53
TNFRSF12A-201ENST00000326577 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF12A-201ENST00000326577 NREPQ16612 68 aa11.74□□□□□ -0.53
TNFRSF12A-201ENST00000326577 PRR15Q8IV56 129 aa11.73□□□□□ -0.53
TNFRSF12A-201ENST00000326577 WFDC13Q8IUB5 93 aa11.71□□□□□ -0.53
TNFRSF12A-201ENST00000326577 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
TNFRSF12A-201ENST00000326577 KRTAP9-7A8MTY7 169 aa11.65□□□□□ -0.54
TNFRSF12A-201ENST00000326577 KRTAP19-1Q8IUB9 90 aa11.64□□□□□ -0.55
TNFRSF12A-201ENST00000326577 TMEM254Q8TBM7 123 aa11.64□□□□□ -0.55
TNFRSF12A-201ENST00000326577 MRPL34Q9BQ48 92 aaKnown RBP11.64□□□□□ -0.55
TNFRSF12A-201ENST00000326577 MMP24-AS1A0A0U1RRL7 71 aa11.63□□□□□ -0.55
TNFRSF12A-201ENST00000326577 BATFQ16520 125 aa11.62□□□□□ -0.55
TNFRSF12A-201ENST00000326577 FCGBPQ9Y6R7 5405 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF12A-201ENST00000326577 hDV103S1A0JD37 113 aa11.58□□□□□ -0.56
TNFRSF12A-201ENST00000326577 TSTD3H0UI37 97 aa11.58□□□□□ -0.56
TNFRSF12A-201ENST00000326577 K7EQZ3 153 aa11.56□□□□□ -0.56
TNFRSF12A-201ENST00000326577 H3BT86 120 aa11.55□□□□□ -0.56
TNFRSF12A-201ENST00000326577 NDUFS5O43920 106 aa11.55□□□□□ -0.56
TNFRSF12A-201ENST00000326577 C9orf118A6NHY6 69 aa11.54□□□□□ -0.56
TNFRSF12A-201ENST00000326577 BPY2O14599 106 aa11.49□□□□□ -0.57
TNFRSF12A-201ENST00000326577 H1FX-AS1Q4G0G2 97 aa11.49□□□□□ -0.57
TNFRSF12A-201ENST00000326577 A0A1W2PPM0 123 aa11.48□□□□□ -0.57
TNFRSF12A-201ENST00000326577 TAX1BP3O14907 124 aa11.47□□□□□ -0.57
TNFRSF12A-201ENST00000326577 IGKV2D-30A0A075B6S6 120 aa11.43□□□□□ -0.58
TNFRSF12A-201ENST00000326577 IGKV2-30P06310 120 aa11.43□□□□□ -0.58
TNFRSF12A-201ENST00000326577 LINC00846Q9NV44 126 aa11.43□□□□□ -0.58
TNFRSF12A-201ENST00000326577 Q5W150 140 aa11.41□□□□□ -0.58
TNFRSF12A-201ENST00000326577 C7orf65Q6ZTY9 151 aa11.39□□□□□ -0.59
TNFRSF12A-201ENST00000326577 KRTAP19-6Q3LI70 58 aa11.38□□□□□ -0.59
TNFRSF12A-201ENST00000326577 CASC2Q6XLA1 102 aa11.36□□□□□ -0.59
TNFRSF12A-201ENST00000326577 Q8N9L7 120 aa11.36□□□□□ -0.59
TNFRSF12A-201ENST00000326577 HCG22E2RYF7 251 aa11.33□□□□□ -0.6
TNFRSF12A-201ENST00000326577 SPCS1Q9Y6A9 102 aa11.31□□□□□ -0.6
TNFRSF12A-201ENST00000326577 LOC105371267A0A1B0GV96 52 aa11.29□□□□□ -0.6
TNFRSF12A-201ENST00000326577 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF12A-201ENST00000326577 CXCL6P80162 114 aa11.26□□□□□ -0.61
TNFRSF12A-201ENST00000326577 C4orf26Q17RF5 130 aa11.25□□□□□ -0.61
TNFRSF12A-201ENST00000326577 MACF1Q9UPN3 7388 aaKnown RBP11.24□□□□□ -0.61
TNFRSF12A-201ENST00000326577 UBL5Q9BZL1 73 aa11.21□□□□□ -0.61
TNFRSF12A-201ENST00000326577 PRO0461Q9UI25 63 aa11.14□□□□□ -0.63
TNFRSF12A-201ENST00000326577 COL5A1-AS1Q5SY13 56 aa11.11□□□□□ -0.63
TNFRSF12A-201ENST00000326577 SYNE2Q8WXH0 6885 aaKnown RBP11.1□□□□□ -0.63
TNFRSF12A-201ENST00000326577 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
TNFRSF12A-201ENST00000326577 KRTAP3-1Q9BYR8 98 aa11.08□□□□□ -0.64
TNFRSF12A-201ENST00000326577 K7EP34 96 aa11.07□□□□□ -0.64
TNFRSF12A-201ENST00000326577 C1orf64Q8NEQ6 169 aa11.03□□□□□ -0.64
TNFRSF12A-201ENST00000326577 S4R3F8 94 aa11.03□□□□□ -0.64
TNFRSF12A-201ENST00000326577 FAM236AA0A1B0GUQ0 79 aa11.02□□□□□ -0.65
TNFRSF12A-201ENST00000326577 FAM236BA0A1B0GV22 79 aa11.02□□□□□ -0.65
TNFRSF12A-201ENST00000326577 TP53AIP1Q9HCN2 124 aa11□□□□□ -0.65
TNFRSF12A-201ENST00000326577 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
TNFRSF12A-201ENST00000326577 KRTAP6-3Q3LI67 103 aa10.95□□□□□ -0.66
TNFRSF12A-201ENST00000326577 LCA10Q71F78 164 aa10.95□□□□□ -0.66
TNFRSF12A-201ENST00000326577 GTF2H5Q6ZYL4 71 aa10.91□□□□□ -0.66
TNFRSF12A-201ENST00000326577 F8W1H4 67 aa10.88□□□□□ -0.67
TNFRSF12A-201ENST00000326577 ETDBQ3ZM63 59 aa10.85□□□□□ -0.67
TNFRSF12A-201ENST00000326577 Q5VV11 94 aa10.85□□□□□ -0.67
TNFRSF12A-201ENST00000326577 MT1BP07438 61 aa10.84□□□□□ -0.67
TNFRSF12A-201ENST00000326577 SPRR2GQ9BYE4 73 aa10.84□□□□□ -0.67
TNFRSF12A-201ENST00000326577 A6NN06 94 aa10.81□□□□□ -0.68
TNFRSF12A-201ENST00000326577 KRTAP19-8Q3LI54 63 aa10.81□□□□□ -0.68
TNFRSF12A-201ENST00000326577 CYP4F30PQ9H0H9 118 aa10.81□□□□□ -0.68
TNFRSF12A-201ENST00000326577 KLKP1Q107X0 134 aa10.78□□□□□ -0.68
TNFRSF12A-201ENST00000326577 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
TNFRSF12A-201ENST00000326577 TRAV22A0A0B4J277 110 aa10.72□□□□□ -0.69
TNFRSF12A-201ENST00000326577 LOC101927531A0A1B0GV80 90 aa10.7□□□□□ -0.7
TNFRSF12A-201ENST00000326577 A0A087WVE0 104 aa10.67□□□□□ -0.7
TNFRSF12A-201ENST00000326577 PCP4L1A6NKN8 68 aa10.67□□□□□ -0.7
TNFRSF12A-201ENST00000326577 ACYP1P07311 99 aa10.65□□□□□ -0.7
TNFRSF12A-201ENST00000326577 KRTAP10-5P60370 271 aa10.64□□□□□ -0.71
TNFRSF12A-201ENST00000326577 CRIPTQ9P021 101 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms