RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
CUL4A-201ENST00000326335 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
CUL4A-201ENST00000326335 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
CUL4A-201ENST00000326335 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
CUL4A-201ENST00000326335 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
CUL4A-201ENST00000326335 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
CUL4A-201ENST00000326335 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
CUL4A-201ENST00000326335 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
CUL4A-201ENST00000326335 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
CUL4A-201ENST00000326335 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
CUL4A-201ENST00000326335 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
CUL4A-201ENST00000326335 TYMSOSQ8TAI1 123 aa6.21□□□□□ -1.41
CUL4A-201ENST00000326335 MRPL34Q9BQ48 92 aaKnown RBP6.21□□□□□ -1.42
CUL4A-201ENST00000326335 Q5W150 140 aa6.2□□□□□ -1.42
CUL4A-201ENST00000326335 ALMS1Q8TCU4 4167 aa6.2□□□□□ -1.42
CUL4A-201ENST00000326335 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
CUL4A-201ENST00000326335 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
CUL4A-201ENST00000326335 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
CUL4A-201ENST00000326335 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
CUL4A-201ENST00000326335 CD164Q04900 197 aa6.17□□□□□ -1.42
CUL4A-201ENST00000326335 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
CUL4A-201ENST00000326335 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
CUL4A-201ENST00000326335 LINC00313P59037 77 aa6.16□□□□□ -1.42
CUL4A-201ENST00000326335 A8MU10 97 aa6.16□□□□□ -1.42
CUL4A-201ENST00000326335 A8MUN3 132 aa6.16□□□□□ -1.42
CUL4A-201ENST00000326335 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CUL4A-201ENST00000326335 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
CUL4A-201ENST00000326335 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
CUL4A-201ENST00000326335 PKD1P98161 4303 aa6.14□□□□□ -1.43
CUL4A-201ENST00000326335 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
CUL4A-201ENST00000326335 SSBP3-AS1Q7Z2R9 100 aa6.12□□□□□ -1.43
CUL4A-201ENST00000326335 LCE6AA0A183 80 aa6.12□□□□□ -1.43
CUL4A-201ENST00000326335 SPINK1P00995 79 aa6.12□□□□□ -1.43
CUL4A-201ENST00000326335 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
CUL4A-201ENST00000326335 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
CUL4A-201ENST00000326335 COA5Q86WW8 74 aa6.11□□□□□ -1.43
CUL4A-201ENST00000326335 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
CUL4A-201ENST00000326335 Q6ZSA8 131 aa6.09□□□□□ -1.43
CUL4A-201ENST00000326335 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
CUL4A-201ENST00000326335 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
CUL4A-201ENST00000326335 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
CUL4A-201ENST00000326335 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
CUL4A-201ENST00000326335 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
CUL4A-201ENST00000326335 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
CUL4A-201ENST00000326335 Q8N1X5 172 aa6.04□□□□□ -1.44
CUL4A-201ENST00000326335 HRES1P13985 223 aa6.02□□□□□ -1.45
CUL4A-201ENST00000326335 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
CUL4A-201ENST00000326335 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
CUL4A-201ENST00000326335 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
CUL4A-201ENST00000326335 A6NED7 52 aa6.01□□□□□ -1.45
CUL4A-201ENST00000326335 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
CUL4A-201ENST00000326335 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
CUL4A-201ENST00000326335 H3BPC8 53 aa6□□□□□ -1.45
CUL4A-201ENST00000326335 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
CUL4A-201ENST00000326335 KIAA1109Q2LD37 5005 aa5.98□□□□□ -1.45
CUL4A-201ENST00000326335 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
CUL4A-201ENST00000326335 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
CUL4A-201ENST00000326335 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
CUL4A-201ENST00000326335 FAM229AH3BQW9 127 aa5.96□□□□□ -1.45
CUL4A-201ENST00000326335 C8orf87E5RJ46 101 aa5.96□□□□□ -1.46
CUL4A-201ENST00000326335 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
CUL4A-201ENST00000326335 RYR3Q15413 4870 aa5.94□□□□□ -1.46
CUL4A-201ENST00000326335 RYR2Q92736 4967 aa5.94□□□□□ -1.46
CUL4A-201ENST00000326335 Q5VV11 94 aa5.94□□□□□ -1.46
CUL4A-201ENST00000326335 Q1T7F1 81 aa5.92□□□□□ -1.46
CUL4A-201ENST00000326335 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
CUL4A-201ENST00000326335 Q5VSD8 79 aa5.9□□□□□ -1.46
CUL4A-201ENST00000326335 ACYP2P14621 99 aa5.9□□□□□ -1.47
CUL4A-201ENST00000326335 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
CUL4A-201ENST00000326335 SPINK7P58062 85 aa5.89□□□□□ -1.47
CUL4A-201ENST00000326335 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
CUL4A-201ENST00000326335 KRTAP13-3Q3SY46 172 aa5.87□□□□□ -1.47
CUL4A-201ENST00000326335 V9GYY9 64 aa5.86□□□□□ -1.47
CUL4A-201ENST00000326335 RYR1P21817 5038 aa5.82□□□□□ -1.48
CUL4A-201ENST00000326335 A0A1B0GU69 56 aa5.82□□□□□ -1.48
CUL4A-201ENST00000326335 LCA10Q71F78 164 aa5.82□□□□□ -1.48
CUL4A-201ENST00000326335 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
CUL4A-201ENST00000326335 EPPK1P58107 5090 aaKnown RBP5.8□□□□□ -1.48
CUL4A-201ENST00000326335 KRTAP10-4P60372 401 aaPredicted RBP5.79□□□□□ -1.48
CUL4A-201ENST00000326335 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
CUL4A-201ENST00000326335 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
CUL4A-201ENST00000326335 HSPG2P98160 4391 aa5.76□□□□□ -1.49
CUL4A-201ENST00000326335 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
CUL4A-201ENST00000326335 Q75L30 129 aa5.73□□□□□ -1.49
CUL4A-201ENST00000326335 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
CUL4A-201ENST00000326335 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
CUL4A-201ENST00000326335 LRP2P98164 4655 aa5.69□□□□□ -1.5
CUL4A-201ENST00000326335 SEC61GP60059 68 aa5.68□□□□□ -1.5
CUL4A-201ENST00000326335 LPAP08519 4548 aa5.68□□□□□ -1.5
CUL4A-201ENST00000326335 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
CUL4A-201ENST00000326335 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
CUL4A-201ENST00000326335 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
CUL4A-201ENST00000326335 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
CUL4A-201ENST00000326335 A8MUU9 505 aa5.64□□□□□ -1.51
CUL4A-201ENST00000326335 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
CUL4A-201ENST00000326335 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
CUL4A-201ENST00000326335 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
CUL4A-201ENST00000326335 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
CUL4A-201ENST00000326335 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
CUL4A-201ENST00000326335 UQCR11O14957 56 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms