RNA–Protein interactions for RNA: ENST00000323929.7

MRE11-201, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRE11, Length 6,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-201ENST00000323929 TNP1P09430 55 aa3.91□□□□□ -1.78
MRE11-201ENST00000323929 ITPR1Q14643 2758 aa3.91□□□□□ -1.78
MRE11-201ENST00000323929 LAMA2P24043 3122 aaKnown RBP3.91□□□□□ -1.78
MRE11-201ENST00000323929 VCANP13611 3396 aa3.9□□□□□ -1.78
MRE11-201ENST00000323929 A0A0C4DFX4 3053 aa3.9□□□□□ -1.78
MRE11-201ENST00000323929 ATMQ13315 3056 aa3.9□□□□□ -1.78
MRE11-201ENST00000323929 VPS13AQ96RL7 3174 aa3.9□□□□□ -1.79
MRE11-201ENST00000323929 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
MRE11-201ENST00000323929 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
MRE11-201ENST00000323929 NBEAL2Q6ZNJ1 2754 aa3.87□□□□□ -1.79
MRE11-201ENST00000323929 NBEAL1Q6ZS30 2694 aa3.87□□□□□ -1.79
MRE11-201ENST00000323929 ALMS1Q8TCU4 4167 aa3.86□□□□□ -1.79
MRE11-201ENST00000323929 DMXL1Q9Y485 3027 aa3.85□□□□□ -1.79
MRE11-201ENST00000323929 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
MRE11-201ENST00000323929 NOTCH1P46531 2555 aa3.84□□□□□ -1.79
MRE11-201ENST00000323929 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
MRE11-201ENST00000323929 CELSR3Q9NYQ7 3312 aa3.83□□□□□ -1.8
MRE11-201ENST00000323929 PDZD2O15018 2839 aa3.83□□□□□ -1.8
MRE11-201ENST00000323929 ZZEF1O43149 2961 aa3.82□□□□□ -1.8
MRE11-201ENST00000323929 FBN2P35556 2912 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 ADGRG4Q8IZF6 3080 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 FREM2Q5SZK8 3169 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 TENM4Q6N022 2769 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 BOD1L1Q8NFC6 3051 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 H0YAA0 97 aa3.81□□□□□ -1.8
MRE11-201ENST00000323929 KRTAP10-10P60014 251 aa3.8□□□□□ -1.8
MRE11-201ENST00000323929 KALRNO60229 2985 aa3.8□□□□□ -1.8
MRE11-201ENST00000323929 FRYLO94915 3013 aa3.79□□□□□ -1.8
MRE11-201ENST00000323929 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
MRE11-201ENST00000323929 NBEAQ8NFP9 2946 aa3.78□□□□□ -1.8
MRE11-201ENST00000323929 NIPBLQ6KC79 2804 aaeCLIP3.75□□□□□ -1.81
MRE11-201ENST00000323929 STAB2Q8WWQ8 2551 aa3.73□□□□□ -1.81
MRE11-201ENST00000323929 P0C880 135 aa3.73□□□□□ -1.81
MRE11-201ENST00000323929 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
MRE11-201ENST00000323929 H3BS24 57 aa3.72□□□□□ -1.81
MRE11-201ENST00000323929 ZFHX3Q15911 3703 aa3.72□□□□□ -1.81
MRE11-201ENST00000323929 MYO15AQ9UKN7 3530 aa3.7□□□□□ -1.82
MRE11-201ENST00000323929 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
MRE11-201ENST00000323929 TACC2O95359 2948 aa3.67□□□□□ -1.82
MRE11-201ENST00000323929 CELSR2Q9HCU4 2923 aa3.66□□□□□ -1.82
MRE11-201ENST00000323929 MT1HL1P0DM35 61 aa3.65□□□□□ -1.82
MRE11-201ENST00000323929 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
MRE11-201ENST00000323929 LOC400499M0QZD8 3231 aa3.64□□□□□ -1.83
MRE11-201ENST00000323929 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
MRE11-201ENST00000323929 BSNQ9UPA5 3926 aa3.64□□□□□ -1.83
MRE11-201ENST00000323929 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
MRE11-201ENST00000323929 OTOGQ6ZRI0 2925 aa3.62□□□□□ -1.83
MRE11-201ENST00000323929 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
MRE11-201ENST00000323929 WDFY3Q8IZQ1 3526 aa3.62□□□□□ -1.83
MRE11-201ENST00000323929 ASPMQ8IZT6 3477 aa3.62□□□□□ -1.83
MRE11-201ENST00000323929 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
MRE11-201ENST00000323929 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
MRE11-201ENST00000323929 CRYBG3Q68DQ2 2970 aa3.61□□□□□ -1.83
MRE11-201ENST00000323929 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
MRE11-201ENST00000323929 NF1P21359 2839 aa3.59□□□□□ -1.83
MRE11-201ENST00000323929 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
MRE11-201ENST00000323929 SPEGQ15772 3267 aa3.58□□□□□ -1.84
MRE11-201ENST00000323929 CFAP47Q6ZTR5 3102 aa3.58□□□□□ -1.84
MRE11-201ENST00000323929 ASH1LQ9NR48 2969 aaKnown RBP3.58□□□□□ -1.84
MRE11-201ENST00000323929 MXRA5Q9NR99 2828 aa3.58□□□□□ -1.84
MRE11-201ENST00000323929 DCHS2Q6V1P9 2916 aa3.57□□□□□ -1.84
MRE11-201ENST00000323929 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
MRE11-201ENST00000323929 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
MRE11-201ENST00000323929 DMDP11532 3685 aa3.56□□□□□ -1.84
MRE11-201ENST00000323929 RELNP78509 3460 aa3.55□□□□□ -1.84
MRE11-201ENST00000323929 AKAP9Q99996 3911 aa3.55□□□□□ -1.84
MRE11-201ENST00000323929 DNAH9Q9NYC9 4486 aa3.54□□□□□ -1.84
MRE11-201ENST00000323929 CELSR1Q9NYQ6 3014 aa3.52□□□□□ -1.85
MRE11-201ENST00000323929 FBN1P35555 2871 aaKnown RBP3.51□□□□□ -1.85
MRE11-201ENST00000323929 TENM3Q9P273 2699 aa3.51□□□□□ -1.85
MRE11-201ENST00000323929 ZFHX4Q86UP3 3567 aa3.51□□□□□ -1.85
MRE11-201ENST00000323929 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
MRE11-201ENST00000323929 KRTAP4-5Q9BYR2 181 aa3.5□□□□□ -1.85
MRE11-201ENST00000323929 FLG2Q5D862 2391 aaPredicted RBP3.48□□□□□ -1.85
MRE11-201ENST00000323929 LAMA5O15230 3695 aa3.48□□□□□ -1.85
MRE11-201ENST00000323929 DNAH2Q9P225 4427 aa3.47□□□□□ -1.85
MRE11-201ENST00000323929 SMG1Q96Q15 3661 aaKnown RBP3.45□□□□□ -1.86
MRE11-201ENST00000323929 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
MRE11-201ENST00000323929 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
MRE11-201ENST00000323929 SPENQ96T58 3664 aaKnown RBP3.44□□□□□ -1.86
MRE11-201ENST00000323929 DNAH1Q9P2D7 4330 aa3.44□□□□□ -1.86
MRE11-201ENST00000323929 DCHS1Q96JQ0 3298 aa3.43□□□□□ -1.86
MRE11-201ENST00000323929 DNAH6Q9C0G6 4158 aa3.43□□□□□ -1.86
MRE11-201ENST00000323929 TENM1Q9UKZ4 2725 aa3.42□□□□□ -1.86
MRE11-201ENST00000323929 DNAH3Q8TD57 4116 aa3.42□□□□□ -1.86
MRE11-201ENST00000323929 KRTAP3-2Q9BYR7 98 aa3.41□□□□□ -1.86
MRE11-201ENST00000323929 DNAH17Q9UFH2 4485 aa3.41□□□□□ -1.86
MRE11-201ENST00000323929 VWFP04275 2813 aa3.41□□□□□ -1.86
MRE11-201ENST00000323929 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.86
MRE11-201ENST00000323929 SVEP1Q4LDE5 3571 aa3.4□□□□□ -1.87
MRE11-201ENST00000323929 CSMD1Q96PZ7 3565 aa3.38□□□□□ -1.87
MRE11-201ENST00000323929 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
MRE11-201ENST00000323929 TGP01266 2768 aa3.37□□□□□ -1.87
MRE11-201ENST00000323929 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
MRE11-201ENST00000323929 TRRAPQ9Y4A5 3859 aa3.35□□□□□ -1.87
MRE11-201ENST00000323929 CUBNO60494 3623 aa3.34□□□□□ -1.88
MRE11-201ENST00000323929 DYNC2H1Q8NCM8 4307 aaKnown RBP3.33□□□□□ -1.88
MRE11-201ENST00000323929 ANK2Q01484 3957 aa3.33□□□□□ -1.88
MRE11-201ENST00000323929 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
MRE11-201ENST00000323929 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms