RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 SPINK6Q6UWN8 80 aa5.44□□□□□ -1.54
CD46-202ENST00000322918 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
CD46-202ENST00000322918 A0A087X002 238 aa5.43□□□□□ -1.54
CD46-202ENST00000322918 DSCR10P59022 87 aa5.43□□□□□ -1.54
CD46-202ENST00000322918 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
CD46-202ENST00000322918 RYR2Q92736 4967 aa5.43□□□□□ -1.54
CD46-202ENST00000322918 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
CD46-202ENST00000322918 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
CD46-202ENST00000322918 IGLV8-61A0A075B6I0 122 aa5.42□□□□□ -1.54
CD46-202ENST00000322918 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
CD46-202ENST00000322918 RYR3Q15413 4870 aa5.41□□□□□ -1.54
CD46-202ENST00000322918 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
CD46-202ENST00000322918 LINC00483Q53H64 154 aa5.4□□□□□ -1.54
CD46-202ENST00000322918 Q8N9P0 234 aaPredicted RBP5.4□□□□□ -1.54
CD46-202ENST00000322918 NDUFB1O75438 58 aa5.4□□□□□ -1.55
CD46-202ENST00000322918 PLA2G1BP04054 148 aaKnown RBP5.39□□□□□ -1.55
CD46-202ENST00000322918 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
CD46-202ENST00000322918 LCA10Q71F78 164 aa5.39□□□□□ -1.55
CD46-202ENST00000322918 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
CD46-202ENST00000322918 MP68P56378 58 aa5.38□□□□□ -1.55
CD46-202ENST00000322918 A6NED7 52 aa5.37□□□□□ -1.55
CD46-202ENST00000322918 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
CD46-202ENST00000322918 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
CD46-202ENST00000322918 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
CD46-202ENST00000322918 IGHV6-1A0A0B4J1U7 121 aa5.36□□□□□ -1.55
CD46-202ENST00000322918 A0A1B0GW54 56 aa5.35□□□□□ -1.55
CD46-202ENST00000322918 ATP11AUNQ6ZP68 121 aa5.35□□□□□ -1.55
CD46-202ENST00000322918 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
CD46-202ENST00000322918 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
CD46-202ENST00000322918 A6NN06 94 aa5.34□□□□□ -1.56
CD46-202ENST00000322918 NDUFS5O43920 106 aa5.33□□□□□ -1.56
CD46-202ENST00000322918 CDK2AP2O75956 126 aa5.33□□□□□ -1.56
CD46-202ENST00000322918 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
CD46-202ENST00000322918 APOBP04114 4563 aaKnown RBP5.33□□□□□ -1.56
CD46-202ENST00000322918 H0Y9P7 68 aa5.32□□□□□ -1.56
CD46-202ENST00000322918 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
CD46-202ENST00000322918 Q75L30 129 aa5.32□□□□□ -1.56
CD46-202ENST00000322918 Q96NJ1 140 aa5.31□□□□□ -1.56
CD46-202ENST00000322918 A8MWP4 228 aa5.31□□□□□ -1.56
CD46-202ENST00000322918 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
CD46-202ENST00000322918 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
CD46-202ENST00000322918 SPANXA2-OT1Q8N9U9 137 aa5.31□□□□□ -1.56
CD46-202ENST00000322918 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
CD46-202ENST00000322918 COA5Q86WW8 74 aa5.3□□□□□ -1.56
CD46-202ENST00000322918 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
CD46-202ENST00000322918 SSBP3-AS1Q7Z2R9 100 aa5.29□□□□□ -1.56
CD46-202ENST00000322918 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
CD46-202ENST00000322918 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
CD46-202ENST00000322918 DMBT1Q9UGM3 2413 aaPredicted RBP5.28□□□□□ -1.56
CD46-202ENST00000322918 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
CD46-202ENST00000322918 KIAA1109Q2LD37 5005 aa5.27□□□□□ -1.57
CD46-202ENST00000322918 KRTAP29-1A8MX34 341 aaPredicted RBP5.27□□□□□ -1.57
CD46-202ENST00000322918 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
CD46-202ENST00000322918 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
CD46-202ENST00000322918 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
CD46-202ENST00000322918 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
CD46-202ENST00000322918 PCOTHQ58A44 107 aa5.25□□□□□ -1.57
CD46-202ENST00000322918 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
CD46-202ENST00000322918 H3BPC8 53 aa5.24□□□□□ -1.57
CD46-202ENST00000322918 FAM229AH3BQW9 127 aa5.24□□□□□ -1.57
CD46-202ENST00000322918 C8orf17Q9NRJ1 99 aa5.24□□□□□ -1.57
CD46-202ENST00000322918 C8orf87E5RJ46 101 aa5.23□□□□□ -1.57
CD46-202ENST00000322918 SPINK7P58062 85 aa5.23□□□□□ -1.57
CD46-202ENST00000322918 Q5VSD8 79 aa5.23□□□□□ -1.57
CD46-202ENST00000322918 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
CD46-202ENST00000322918 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
CD46-202ENST00000322918 KRTAP10-4P60372 401 aaPredicted RBP5.22□□□□□ -1.57
CD46-202ENST00000322918 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.57
CD46-202ENST00000322918 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
CD46-202ENST00000322918 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
CD46-202ENST00000322918 HSPG2P98160 4391 aa5.21□□□□□ -1.58
CD46-202ENST00000322918 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
CD46-202ENST00000322918 LINC00313P59037 77 aa5.19□□□□□ -1.58
CD46-202ENST00000322918 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
CD46-202ENST00000322918 MRPL34Q9BQ48 92 aaKnown RBP5.17□□□□□ -1.58
CD46-202ENST00000322918 SPINK1P00995 79 aa5.17□□□□□ -1.58
CD46-202ENST00000322918 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
CD46-202ENST00000322918 HRES1P13985 223 aa5.15□□□□□ -1.59
CD46-202ENST00000322918 H3BS24 57 aa5.13□□□□□ -1.59
CD46-202ENST00000322918 Q8N1X5 172 aa5.13□□□□□ -1.59
CD46-202ENST00000322918 RYR1P21817 5038 aa5.13□□□□□ -1.59
CD46-202ENST00000322918 Q5W150 140 aa5.13□□□□□ -1.59
CD46-202ENST00000322918 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
CD46-202ENST00000322918 ASB16-AS1Q495Z4 193 aa5.1□□□□□ -1.59
CD46-202ENST00000322918 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
CD46-202ENST00000322918 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
CD46-202ENST00000322918 TP53AIP1Q9HCN2 124 aa5.08□□□□□ -1.6
CD46-202ENST00000322918 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
CD46-202ENST00000322918 IGKV2D-30A0A075B6S6 120 aa5.06□□□□□ -1.6
CD46-202ENST00000322918 IGKV2-30P06310 120 aa5.06□□□□□ -1.6
CD46-202ENST00000322918 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
CD46-202ENST00000322918 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
CD46-202ENST00000322918 TNXBP22105 4242 aa5.02□□□□□ -1.61
CD46-202ENST00000322918 A0A1B0GU69 56 aa4.99□□□□□ -1.61
CD46-202ENST00000322918 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
CD46-202ENST00000322918 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
CD46-202ENST00000322918 ACYP2P14621 99 aa4.98□□□□□ -1.61
CD46-202ENST00000322918 MT1HL1P0DM35 61 aa4.97□□□□□ -1.61
CD46-202ENST00000322918 KRTAP13-3Q3SY46 172 aa4.97□□□□□ -1.61
CD46-202ENST00000322918 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms