RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 MRPL34Q9BQ48 92 aaKnown RBP8.12□□□□□ -1.11
VAMP2-201ENST00000316509 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
VAMP2-201ENST00000316509 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
VAMP2-201ENST00000316509 TRAV22A0A0B4J277 110 aa8.11□□□□□ -1.11
VAMP2-201ENST00000316509 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
VAMP2-201ENST00000316509 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
VAMP2-201ENST00000316509 HYDINQ4G0P3 5121 aa8.08□□□□□ -1.12
VAMP2-201ENST00000316509 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
VAMP2-201ENST00000316509 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
VAMP2-201ENST00000316509 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
VAMP2-201ENST00000316509 C1orf64Q8NEQ6 169 aa8.07□□□□□ -1.12
VAMP2-201ENST00000316509 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
VAMP2-201ENST00000316509 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
VAMP2-201ENST00000316509 SPINK1P00995 79 aa8.05□□□□□ -1.12
VAMP2-201ENST00000316509 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
VAMP2-201ENST00000316509 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
VAMP2-201ENST00000316509 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
VAMP2-201ENST00000316509 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
VAMP2-201ENST00000316509 PRO0628Q9UI54 55 aa8.04□□□□□ -1.12
VAMP2-201ENST00000316509 NDUFS5O43920 106 aa8.03□□□□□ -1.12
VAMP2-201ENST00000316509 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
VAMP2-201ENST00000316509 LRP1BQ9NZR2 4599 aa8.02□□□□□ -1.13
VAMP2-201ENST00000316509 LINC00313P59037 77 aa8.02□□□□□ -1.13
VAMP2-201ENST00000316509 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
VAMP2-201ENST00000316509 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
VAMP2-201ENST00000316509 LOC101927531A0A1B0GV80 90 aa7.96□□□□□ -1.14
VAMP2-201ENST00000316509 Q8N9P0 234 aaPredicted RBP7.95□□□□□ -1.14
VAMP2-201ENST00000316509 IGLV7-46A0A075B6I9 117 aa7.95□□□□□ -1.14
VAMP2-201ENST00000316509 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
VAMP2-201ENST00000316509 RYR2Q92736 4967 aa7.94□□□□□ -1.14
VAMP2-201ENST00000316509 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
VAMP2-201ENST00000316509 KRTAP10-4P60372 401 aaPredicted RBP7.93□□□□□ -1.14
VAMP2-201ENST00000316509 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
VAMP2-201ENST00000316509 KRTAP13-3Q3SY46 172 aa7.92□□□□□ -1.14
VAMP2-201ENST00000316509 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
VAMP2-201ENST00000316509 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
VAMP2-201ENST00000316509 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.14
VAMP2-201ENST00000316509 BRK1Q8WUW1 75 aa7.9□□□□□ -1.15
VAMP2-201ENST00000316509 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
VAMP2-201ENST00000316509 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
VAMP2-201ENST00000316509 Q5W150 140 aa7.88□□□□□ -1.15
VAMP2-201ENST00000316509 PRR4Q16378 134 aa7.87□□□□□ -1.15
VAMP2-201ENST00000316509 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
VAMP2-201ENST00000316509 Q1T7F1 81 aa7.83□□□□□ -1.16
VAMP2-201ENST00000316509 V9GYY9 64 aa7.83□□□□□ -1.16
VAMP2-201ENST00000316509 RYR3Q15413 4870 aa7.81□□□□□ -1.16
VAMP2-201ENST00000316509 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
VAMP2-201ENST00000316509 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
VAMP2-201ENST00000316509 APOBP04114 4563 aaKnown RBP7.78□□□□□ -1.16
VAMP2-201ENST00000316509 COA5Q86WW8 74 aa7.77□□□□□ -1.17
VAMP2-201ENST00000316509 ACYP2P14621 99 aa7.72□□□□□ -1.17
VAMP2-201ENST00000316509 HRES1P13985 223 aa7.71□□□□□ -1.17
VAMP2-201ENST00000316509 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
VAMP2-201ENST00000316509 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
VAMP2-201ENST00000316509 Q5VSD8 79 aa7.69□□□□□ -1.18
VAMP2-201ENST00000316509 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
VAMP2-201ENST00000316509 C20orf166-AS1Q96NR2 134 aa7.69□□□□□ -1.18
VAMP2-201ENST00000316509 A8MUU9 505 aa7.68□□□□□ -1.18
VAMP2-201ENST00000316509 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
VAMP2-201ENST00000316509 PSPHP1O15172 72 aa7.67□□□□□ -1.18
VAMP2-201ENST00000316509 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
VAMP2-201ENST00000316509 FAT1Q14517 4588 aa7.64□□□□□ -1.19
VAMP2-201ENST00000316509 IGKV2D-30A0A075B6S6 120 aa7.63□□□□□ -1.19
VAMP2-201ENST00000316509 SEC61GP60059 68 aa7.61□□□□□ -1.19
VAMP2-201ENST00000316509 Q8N1X5 172 aa7.61□□□□□ -1.19
VAMP2-201ENST00000316509 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
VAMP2-201ENST00000316509 A8MUN3 132 aa7.6□□□□□ -1.19
VAMP2-201ENST00000316509 C9orf92A6NGG3 77 aa7.59□□□□□ -1.2
VAMP2-201ENST00000316509 A8MU10 97 aa7.59□□□□□ -1.2
VAMP2-201ENST00000316509 Q75L30 129 aa7.58□□□□□ -1.2
VAMP2-201ENST00000316509 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
VAMP2-201ENST00000316509 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
VAMP2-201ENST00000316509 Q5VV11 94 aa7.56□□□□□ -1.2
VAMP2-201ENST00000316509 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
VAMP2-201ENST00000316509 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
VAMP2-201ENST00000316509 RYR1P21817 5038 aa7.52□□□□□ -1.21
VAMP2-201ENST00000316509 HSPG2P98160 4391 aa7.5□□□□□ -1.21
VAMP2-201ENST00000316509 KRTAP17-1Q9BYP8 105 aa7.49□□□□□ -1.21
VAMP2-201ENST00000316509 FLG2Q5D862 2391 aaPredicted RBP7.48□□□□□ -1.21
VAMP2-201ENST00000316509 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.22
VAMP2-201ENST00000316509 SPINK7P58062 85 aa7.45□□□□□ -1.22
VAMP2-201ENST00000316509 MT1HL1P0DM35 61 aa7.44□□□□□ -1.22
VAMP2-201ENST00000316509 ATP11AUNQ6ZP68 121 aa7.44□□□□□ -1.22
VAMP2-201ENST00000316509 TNXBP22105 4242 aa7.43□□□□□ -1.22
VAMP2-201ENST00000316509 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
VAMP2-201ENST00000316509 RPL37P61927 97 aaKnown RBP7.42□□□□□ -1.22
VAMP2-201ENST00000316509 LCA10Q71F78 164 aa7.42□□□□□ -1.22
VAMP2-201ENST00000316509 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.23
VAMP2-201ENST00000316509 A6NED7 52 aa7.39□□□□□ -1.23
VAMP2-201ENST00000316509 A0A1B0GU69 56 aa7.36□□□□□ -1.23
VAMP2-201ENST00000316509 XP32Q5T750 250 aa7.36□□□□□ -1.23
VAMP2-201ENST00000316509 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
VAMP2-201ENST00000316509 KRTAP4-5Q9BYR2 181 aa7.35□□□□□ -1.23
VAMP2-201ENST00000316509 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
VAMP2-201ENST00000316509 CDC42SE1Q9NRR8 79 aa7.34□□□□□ -1.23
VAMP2-201ENST00000316509 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
VAMP2-201ENST00000316509 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
VAMP2-201ENST00000316509 A6NN06 94 aa7.32□□□□□ -1.24
VAMP2-201ENST00000316509 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
VAMP2-201ENST00000316509 TPRXLQ17RH7 258 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms