RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 KRTAP10-1P60331 282 aa8.86□□□□□ -0.99
CHFR-202ENST00000315585 NDUFS5O43920 106 aa8.85□□□□□ -0.99
CHFR-202ENST00000315585 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
CHFR-202ENST00000315585 IGLV7-46A0A075B6I9 117 aa8.84□□□□□ -0.99
CHFR-202ENST00000315585 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
CHFR-202ENST00000315585 C1orf195Q5TG92 126 aa8.81□□□□□ -1
CHFR-202ENST00000315585 C8orf87E5RJ46 101 aa8.8□□□□□ -1
CHFR-202ENST00000315585 BRK1Q8WUW1 75 aa8.79□□□□□ -1
CHFR-202ENST00000315585 LIMD2Q9BT23 127 aa8.76□□□□□ -1.01
CHFR-202ENST00000315585 SPINK6Q6UWN8 80 aa8.76□□□□□ -1.01
CHFR-202ENST00000315585 LOC101927531A0A1B0GV80 90 aa8.75□□□□□ -1.01
CHFR-202ENST00000315585 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
CHFR-202ENST00000315585 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
CHFR-202ENST00000315585 COA5Q86WW8 74 aa8.71□□□□□ -1.02
CHFR-202ENST00000315585 A0A087X002 238 aa8.69□□□□□ -1.02
CHFR-202ENST00000315585 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
CHFR-202ENST00000315585 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
CHFR-202ENST00000315585 PSPHP1O15172 72 aa8.68□□□□□ -1.02
CHFR-202ENST00000315585 LINC00313P59037 77 aa8.68□□□□□ -1.02
CHFR-202ENST00000315585 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
CHFR-202ENST00000315585 DNAH11Q96DT5 4516 aa8.67□□□□□ -1.02
CHFR-202ENST00000315585 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
CHFR-202ENST00000315585 FAM229AH3BQW9 127 aa8.64□□□□□ -1.03
CHFR-202ENST00000315585 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
CHFR-202ENST00000315585 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
CHFR-202ENST00000315585 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
CHFR-202ENST00000315585 PKD1P98161 4303 aa8.64□□□□□ -1.03
CHFR-202ENST00000315585 A8MUN3 132 aa8.62□□□□□ -1.03
CHFR-202ENST00000315585 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
CHFR-202ENST00000315585 KRTAP13-2Q52LG2 175 aa8.61□□□□□ -1.03
CHFR-202ENST00000315585 KRTAP13-3Q3SY46 172 aa8.6□□□□□ -1.03
CHFR-202ENST00000315585 Q5W150 140 aa8.59□□□□□ -1.03
CHFR-202ENST00000315585 Q5VV11 94 aa8.58□□□□□ -1.04
CHFR-202ENST00000315585 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
CHFR-202ENST00000315585 ACYP2P14621 99 aa8.57□□□□□ -1.04
CHFR-202ENST00000315585 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
CHFR-202ENST00000315585 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
CHFR-202ENST00000315585 SPINK1P00995 79 aa8.56□□□□□ -1.04
CHFR-202ENST00000315585 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
CHFR-202ENST00000315585 HRES1P13985 223 aa8.55□□□□□ -1.04
CHFR-202ENST00000315585 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
CHFR-202ENST00000315585 Q75L30 129 aa8.55□□□□□ -1.04
CHFR-202ENST00000315585 LINC01558Q9Y6Z2 57 aa8.55□□□□□ -1.04
CHFR-202ENST00000315585 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
CHFR-202ENST00000315585 SMR3BP02814 79 aaPredicted RBP8.51□□□□□ -1.05
CHFR-202ENST00000315585 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
CHFR-202ENST00000315585 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
CHFR-202ENST00000315585 IGKV2-30P06310 120 aa8.49□□□□□ -1.05
CHFR-202ENST00000315585 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
CHFR-202ENST00000315585 A6NED7 52 aa8.46□□□□□ -1.05
CHFR-202ENST00000315585 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.05
CHFR-202ENST00000315585 LRP1BQ9NZR2 4599 aa8.45□□□□□ -1.06
CHFR-202ENST00000315585 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
CHFR-202ENST00000315585 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
CHFR-202ENST00000315585 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
CHFR-202ENST00000315585 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
CHFR-202ENST00000315585 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
CHFR-202ENST00000315585 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
CHFR-202ENST00000315585 RYR2Q92736 4967 aa8.38□□□□□ -1.07
CHFR-202ENST00000315585 PKHD1P08F94 4074 aa8.36□□□□□ -1.07
CHFR-202ENST00000315585 IGKV2D-30A0A075B6S6 120 aa8.35□□□□□ -1.07
CHFR-202ENST00000315585 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
CHFR-202ENST00000315585 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
CHFR-202ENST00000315585 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
CHFR-202ENST00000315585 LCA10Q71F78 164 aa8.32□□□□□ -1.08
CHFR-202ENST00000315585 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
CHFR-202ENST00000315585 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
CHFR-202ENST00000315585 A0A1B0GU69 56 aa8.28□□□□□ -1.08
CHFR-202ENST00000315585 Q5VSD8 79 aa8.27□□□□□ -1.09
CHFR-202ENST00000315585 KMT2CQ8NEZ4 4911 aaKnown RBP8.27□□□□□ -1.09
CHFR-202ENST00000315585 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
CHFR-202ENST00000315585 A8MU10 97 aa8.25□□□□□ -1.09
CHFR-202ENST00000315585 SPINK7P58062 85 aa8.24□□□□□ -1.09
CHFR-202ENST00000315585 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
CHFR-202ENST00000315585 A8MUU9 505 aa8.19□□□□□ -1.1
CHFR-202ENST00000315585 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
CHFR-202ENST00000315585 UQCR11O14957 56 aa8.15□□□□□ -1.1
CHFR-202ENST00000315585 A6NN06 94 aa8.14□□□□□ -1.11
CHFR-202ENST00000315585 SEC61GP60059 68 aa8.13□□□□□ -1.11
CHFR-202ENST00000315585 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
CHFR-202ENST00000315585 Q8N1X5 172 aa8.13□□□□□ -1.11
CHFR-202ENST00000315585 FAT1Q14517 4588 aa8.12□□□□□ -1.11
CHFR-202ENST00000315585 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
CHFR-202ENST00000315585 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CHFR-202ENST00000315585 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
CHFR-202ENST00000315585 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
CHFR-202ENST00000315585 RYR3Q15413 4870 aa8.05□□□□□ -1.12
CHFR-202ENST00000315585 HSPG2P98160 4391 aa8.02□□□□□ -1.13
CHFR-202ENST00000315585 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
CHFR-202ENST00000315585 FLG2Q5D862 2391 aaPredicted RBP7.97□□□□□ -1.13
CHFR-202ENST00000315585 RYR1P21817 5038 aa7.95□□□□□ -1.14
CHFR-202ENST00000315585 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
CHFR-202ENST00000315585 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
CHFR-202ENST00000315585 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.15
CHFR-202ENST00000315585 TNXBP22105 4242 aa7.85□□□□□ -1.15
CHFR-202ENST00000315585 RBM12B-AS1Q9P1G2 102 aa7.84□□□□□ -1.15
CHFR-202ENST00000315585 KIAA1109Q2LD37 5005 aa7.83□□□□□ -1.16
CHFR-202ENST00000315585 A0A1B0GU33 70 aa7.83□□□□□ -1.16
CHFR-202ENST00000315585 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
CHFR-202ENST00000315585 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms