RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
EBF1-201ENST00000313708 CFAP46Q8IYW2 2715 aa7.11□□□□□ -1.27
EBF1-201ENST00000313708 A0A087WTM6 91 aa7.1□□□□□ -1.27
EBF1-201ENST00000313708 UBR5O95071 2799 aaPredicted RBP7.07□□□□□ -1.28
EBF1-201ENST00000313708 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
EBF1-201ENST00000313708 DMBT1Q9UGM3 2413 aaPredicted RBP7.06□□□□□ -1.28
EBF1-201ENST00000313708 Q6ZSA8 131 aa7.05□□□□□ -1.28
EBF1-201ENST00000313708 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
EBF1-201ENST00000313708 H0YAA0 97 aa7.04□□□□□ -1.28
EBF1-201ENST00000313708 CRYBG3Q68DQ2 2970 aa7.02□□□□□ -1.29
EBF1-201ENST00000313708 NBEAL1Q6ZS30 2694 aa7.02□□□□□ -1.29
EBF1-201ENST00000313708 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
EBF1-201ENST00000313708 NF1P21359 2839 aa6.99□□□□□ -1.29
EBF1-201ENST00000313708 KRTAP24-1Q3LI83 254 aa6.99□□□□□ -1.29
EBF1-201ENST00000313708 COL6A5A8TX70 2615 aa6.99□□□□□ -1.29
EBF1-201ENST00000313708 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
EBF1-201ENST00000313708 HIVEP1P15822 2718 aa6.98□□□□□ -1.29
EBF1-201ENST00000313708 MUC3AQ02505 3323 aa6.97□□□□□ -1.29
EBF1-201ENST00000313708 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
EBF1-201ENST00000313708 FLNCQ14315 2725 aa6.97□□□□□ -1.29
EBF1-201ENST00000313708 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
EBF1-201ENST00000313708 TEP1Q99973 2627 aaKnown RBP6.94□□□□□ -1.3
EBF1-201ENST00000313708 P0C880 135 aa6.92□□□□□ -1.3
EBF1-201ENST00000313708 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
EBF1-201ENST00000313708 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
EBF1-201ENST00000313708 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
EBF1-201ENST00000313708 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
EBF1-201ENST00000313708 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
EBF1-201ENST00000313708 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
EBF1-201ENST00000313708 J3QL48 77 aa6.85□□□□□ -1.31
EBF1-201ENST00000313708 STAB1Q9NY15 2570 aa6.83□□□□□ -1.32
EBF1-201ENST00000313708 HECTD1Q9ULT8 2610 aa6.82□□□□□ -1.32
EBF1-201ENST00000313708 NIPBLQ6KC79 2804 aaeCLIP6.81□□□□□ -1.32
EBF1-201ENST00000313708 MAST4O15021 2626 aa6.81□□□□□ -1.32
EBF1-201ENST00000313708 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
EBF1-201ENST00000313708 IGSF10Q6WRI0 2623 aa6.79□□□□□ -1.32
EBF1-201ENST00000313708 S4R3F8 94 aa6.78□□□□□ -1.32
EBF1-201ENST00000313708 BSNQ9UPA5 3926 aa6.76□□□□□ -1.33
EBF1-201ENST00000313708 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
EBF1-201ENST00000313708 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
EBF1-201ENST00000313708 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
EBF1-201ENST00000313708 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
EBF1-201ENST00000313708 TPRXLQ17RH7 258 aa6.68□□□□□ -1.34
EBF1-201ENST00000313708 TGP01266 2768 aa6.66□□□□□ -1.34
EBF1-201ENST00000313708 SRRM2Q9UQ35 2752 aaKnown RBP6.65□□□□□ -1.34
EBF1-201ENST00000313708 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
EBF1-201ENST00000313708 TENM3Q9P273 2699 aa6.62□□□□□ -1.35
EBF1-201ENST00000313708 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
EBF1-201ENST00000313708 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
EBF1-201ENST00000313708 CAMK2N1Q7Z7J9 78 aa6.56□□□□□ -1.36
EBF1-201ENST00000313708 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
EBF1-201ENST00000313708 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
EBF1-201ENST00000313708 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
EBF1-201ENST00000313708 R4GN34 69 aa6.55□□□□□ -1.36
EBF1-201ENST00000313708 M0QZ58 72 aa6.55□□□□□ -1.36
EBF1-201ENST00000313708 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
EBF1-201ENST00000313708 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
EBF1-201ENST00000313708 VWFP04275 2813 aa6.53□□□□□ -1.36
EBF1-201ENST00000313708 PDZD2O15018 2839 aa6.53□□□□□ -1.36
EBF1-201ENST00000313708 KMT2BQ9UMN6 2715 aaPredicted RBP6.49□□□□□ -1.37
EBF1-201ENST00000313708 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.38
EBF1-201ENST00000313708 TENM2Q9NT68 2774 aa6.46□□□□□ -1.38
EBF1-201ENST00000313708 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
EBF1-201ENST00000313708 RPS29P62273 56 aaKnown RBP6.41□□□□□ -1.38
EBF1-201ENST00000313708 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.38
EBF1-201ENST00000313708 FBN1P35555 2871 aaKnown RBP6.4□□□□□ -1.38
EBF1-201ENST00000313708 TENM1Q9UKZ4 2725 aa6.4□□□□□ -1.39
EBF1-201ENST00000313708 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
EBF1-201ENST00000313708 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
EBF1-201ENST00000313708 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
EBF1-201ENST00000313708 AKAP9Q99996 3911 aa6.36□□□□□ -1.39
EBF1-201ENST00000313708 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
EBF1-201ENST00000313708 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
EBF1-201ENST00000313708 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
EBF1-201ENST00000313708 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
EBF1-201ENST00000313708 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
EBF1-201ENST00000313708 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
EBF1-201ENST00000313708 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
EBF1-201ENST00000313708 TENM4Q6N022 2769 aa6.22□□□□□ -1.41
EBF1-201ENST00000313708 ANK3Q12955 4377 aaKnown RBP6.21□□□□□ -1.42
EBF1-201ENST00000313708 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
EBF1-201ENST00000313708 XP32Q5T750 250 aa6.17□□□□□ -1.42
EBF1-201ENST00000313708 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
EBF1-201ENST00000313708 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
EBF1-201ENST00000313708 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
EBF1-201ENST00000313708 TNP1P09430 55 aa6.06□□□□□ -1.44
EBF1-201ENST00000313708 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
EBF1-201ENST00000313708 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
EBF1-201ENST00000313708 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
EBF1-201ENST00000313708 Q5VSD8 79 aa5.94□□□□□ -1.46
EBF1-201ENST00000313708 HUWE1Q7Z6Z7 4374 aaKnown RBP5.89□□□□□ -1.47
EBF1-201ENST00000313708 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
EBF1-201ENST00000313708 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
EBF1-201ENST00000313708 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
EBF1-201ENST00000313708 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
EBF1-201ENST00000313708 INE1O15225 51 aa5.71□□□□□ -1.5
EBF1-201ENST00000313708 DNAH1Q9P2D7 4330 aa5.7□□□□□ -1.5
EBF1-201ENST00000313708 M0R2T5 61 aa5.7□□□□□ -1.5
EBF1-201ENST00000313708 DNAH9Q9NYC9 4486 aa5.66□□□□□ -1.5
EBF1-201ENST00000313708 DNAH17Q9UFH2 4485 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms