RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 M0R2T5 61 aa5.16□□□□□ -1.58
COL6A5-202ENST00000312481 KRTAP21-3Q3LHN1 58 aa5.15□□□□□ -1.58
COL6A5-202ENST00000312481 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
COL6A5-202ENST00000312481 DMXL1Q9Y485 3027 aa5.15□□□□□ -1.59
COL6A5-202ENST00000312481 R4GN34 69 aa5.13□□□□□ -1.59
COL6A5-202ENST00000312481 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
COL6A5-202ENST00000312481 XIRP2A4UGR9 3374 aa5.12□□□□□ -1.59
COL6A5-202ENST00000312481 A0A0G2JQZ4 141 aa5.11□□□□□ -1.59
COL6A5-202ENST00000312481 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
COL6A5-202ENST00000312481 Q6ZRN7 208 aaPredicted RBP5.1□□□□□ -1.59
COL6A5-202ENST00000312481 TENM4Q6N022 2769 aa5.1□□□□□ -1.59
COL6A5-202ENST00000312481 A8MUU9 505 aa5.09□□□□□ -1.59
COL6A5-202ENST00000312481 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.59
COL6A5-202ENST00000312481 FREM2Q5SZK8 3169 aa5.09□□□□□ -1.59
COL6A5-202ENST00000312481 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
COL6A5-202ENST00000312481 BRCA2P51587 3418 aa5.05□□□□□ -1.6
COL6A5-202ENST00000312481 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
COL6A5-202ENST00000312481 COL6A3P12111 3177 aa5.02□□□□□ -1.61
COL6A5-202ENST00000312481 CDH23Q9H251 3354 aa5.01□□□□□ -1.61
COL6A5-202ENST00000312481 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
COL6A5-202ENST00000312481 VCANP13611 3396 aa5□□□□□ -1.61
COL6A5-202ENST00000312481 DNAH14Q0VDD8 3507 aa4.98□□□□□ -1.61
COL6A5-202ENST00000312481 CELSR3Q9NYQ7 3312 aa4.97□□□□□ -1.61
COL6A5-202ENST00000312481 UNC80Q8N2C7 3258 aa4.97□□□□□ -1.61
COL6A5-202ENST00000312481 PKD1L1Q8TDX9 2849 aa4.96□□□□□ -1.62
COL6A5-202ENST00000312481 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
COL6A5-202ENST00000312481 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
COL6A5-202ENST00000312481 TENM2Q9NT68 2774 aa4.94□□□□□ -1.62
COL6A5-202ENST00000312481 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
COL6A5-202ENST00000312481 SPTBN5Q9NRC6 3674 aaKnown RBP4.93□□□□□ -1.62
COL6A5-202ENST00000312481 REV3LO60673 3130 aa4.93□□□□□ -1.62
COL6A5-202ENST00000312481 KRTAP10-1P60331 282 aa4.92□□□□□ -1.62
COL6A5-202ENST00000312481 Q5VSD8 79 aa4.92□□□□□ -1.62
COL6A5-202ENST00000312481 KRTAP11-1Q8IUC1 163 aa4.92□□□□□ -1.62
COL6A5-202ENST00000312481 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
COL6A5-202ENST00000312481 TNP1P09430 55 aa4.9□□□□□ -1.63
COL6A5-202ENST00000312481 CFAP47Q6ZTR5 3102 aa4.86□□□□□ -1.63
COL6A5-202ENST00000312481 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
COL6A5-202ENST00000312481 KRTAP10-2P60368 255 aa4.84□□□□□ -1.64
COL6A5-202ENST00000312481 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
COL6A5-202ENST00000312481 H0YAA0 97 aa4.82□□□□□ -1.64
COL6A5-202ENST00000312481 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
COL6A5-202ENST00000312481 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
COL6A5-202ENST00000312481 LOC400499M0QZD8 3231 aa4.8□□□□□ -1.64
COL6A5-202ENST00000312481 EYSQ5T1H1 3165 aa4.8□□□□□ -1.64
COL6A5-202ENST00000312481 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
COL6A5-202ENST00000312481 MEGF8Q7Z7M0 2845 aa4.8□□□□□ -1.64
COL6A5-202ENST00000312481 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
COL6A5-202ENST00000312481 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
COL6A5-202ENST00000312481 P0C880 135 aa4.7□□□□□ -1.66
COL6A5-202ENST00000312481 FBN3Q75N90 2809 aa4.68□□□□□ -1.66
COL6A5-202ENST00000312481 SPENQ96T58 3664 aaKnown RBP4.67□□□□□ -1.66
COL6A5-202ENST00000312481 AKAP9Q99996 3911 aa4.66□□□□□ -1.66
COL6A5-202ENST00000312481 NDUFAF8A1L188 74 aa4.65□□□□□ -1.66
COL6A5-202ENST00000312481 SPEGQ15772 3267 aa4.63□□□□□ -1.67
COL6A5-202ENST00000312481 XP32Q5T750 250 aa4.63□□□□□ -1.67
COL6A5-202ENST00000312481 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
COL6A5-202ENST00000312481 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
COL6A5-202ENST00000312481 OTOGQ6ZRI0 2925 aa4.6□□□□□ -1.67
COL6A5-202ENST00000312481 A8MU10 97 aa4.6□□□□□ -1.67
COL6A5-202ENST00000312481 NBPF19A0A087WUL8 3843 aa4.6□□□□□ -1.67
COL6A5-202ENST00000312481 MYO15AQ9UKN7 3530 aa4.59□□□□□ -1.67
COL6A5-202ENST00000312481 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
COL6A5-202ENST00000312481 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
COL6A5-202ENST00000312481 WDFY3Q8IZQ1 3526 aa4.53□□□□□ -1.68
COL6A5-202ENST00000312481 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
COL6A5-202ENST00000312481 TRRAPQ9Y4A5 3859 aa4.49□□□□□ -1.69
COL6A5-202ENST00000312481 ZFHX4Q86UP3 3567 aa4.47□□□□□ -1.69
COL6A5-202ENST00000312481 KRTAP10-8P60410 259 aa4.46□□□□□ -1.69
COL6A5-202ENST00000312481 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
COL6A5-202ENST00000312481 LAMA5O15230 3695 aa4.46□□□□□ -1.7
COL6A5-202ENST00000312481 BSNQ9UPA5 3926 aa4.44□□□□□ -1.7
COL6A5-202ENST00000312481 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
COL6A5-202ENST00000312481 INE1O15225 51 aa4.42□□□□□ -1.7
COL6A5-202ENST00000312481 DCHS1Q96JQ0 3298 aa4.4□□□□□ -1.71
COL6A5-202ENST00000312481 RELNP78509 3460 aa4.37□□□□□ -1.71
COL6A5-202ENST00000312481 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
COL6A5-202ENST00000312481 SMG1Q96Q15 3661 aaKnown RBP4.34□□□□□ -1.72
COL6A5-202ENST00000312481 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
COL6A5-202ENST00000312481 DMDP11532 3685 aa4.33□□□□□ -1.72
COL6A5-202ENST00000312481 ASPMQ8IZT6 3477 aa4.29□□□□□ -1.72
COL6A5-202ENST00000312481 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
COL6A5-202ENST00000312481 KRTAP10-6P60371 365 aaPredicted RBP4.25□□□□□ -1.73
COL6A5-202ENST00000312481 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
COL6A5-202ENST00000312481 CSMD1Q96PZ7 3565 aa4.22□□□□□ -1.73
COL6A5-202ENST00000312481 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
COL6A5-202ENST00000312481 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
COL6A5-202ENST00000312481 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
COL6A5-202ENST00000312481 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
COL6A5-202ENST00000312481 HECTD4Q9Y4D8 3996 aa4.19□□□□□ -1.74
COL6A5-202ENST00000312481 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
COL6A5-202ENST00000312481 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.74
COL6A5-202ENST00000312481 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
COL6A5-202ENST00000312481 MUC3AQ02505 3323 aa4.13□□□□□ -1.75
COL6A5-202ENST00000312481 DNAH6Q9C0G6 4158 aa4.11□□□□□ -1.75
COL6A5-202ENST00000312481 SVEP1Q4LDE5 3571 aa4.1□□□□□ -1.75
COL6A5-202ENST00000312481 ZNF469Q96JG9 3925 aaPredicted RBP4.09□□□□□ -1.75
COL6A5-202ENST00000312481 CUBNO60494 3623 aa4.09□□□□□ -1.75
COL6A5-202ENST00000312481 KRTAP3-2Q9BYR7 98 aa4.09□□□□□ -1.76
COL6A5-202ENST00000312481 DNAH1Q9P2D7 4330 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms