RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
RTP1-201ENST00000312295 FAM229BQ4G0N7 80 aa8.84□□□□□ -0.99
RTP1-201ENST00000312295 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
RTP1-201ENST00000312295 Q96NJ1 140 aa8.83□□□□□ -1
RTP1-201ENST00000312295 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
RTP1-201ENST00000312295 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
RTP1-201ENST00000312295 PKHD1L1Q86WI1 4243 aa8.79□□□□□ -1
RTP1-201ENST00000312295 Q5VSD8 79 aa8.79□□□□□ -1
RTP1-201ENST00000312295 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
RTP1-201ENST00000312295 LRP1Q07954 4544 aaKnown RBP8.77□□□□□ -1.01
RTP1-201ENST00000312295 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
RTP1-201ENST00000312295 WFDC13Q8IUB5 93 aa8.77□□□□□ -1.01
RTP1-201ENST00000312295 CDK2AP2O75956 126 aa8.76□□□□□ -1.01
RTP1-201ENST00000312295 A8MWP4 228 aa8.76□□□□□ -1.01
RTP1-201ENST00000312295 LCE2BO14633 110 aa8.75□□□□□ -1.01
RTP1-201ENST00000312295 CD164Q04900 197 aa8.74□□□□□ -1.01
RTP1-201ENST00000312295 HCG22E2RYF7 251 aa8.73□□□□□ -1.01
RTP1-201ENST00000312295 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
RTP1-201ENST00000312295 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
RTP1-201ENST00000312295 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
RTP1-201ENST00000312295 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
RTP1-201ENST00000312295 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
RTP1-201ENST00000312295 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
RTP1-201ENST00000312295 NDUFB1O75438 58 aa8.68□□□□□ -1.02
RTP1-201ENST00000312295 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
RTP1-201ENST00000312295 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 C1orf195Q5TG92 126 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 TNXBP22105 4242 aa8.66□□□□□ -1.02
RTP1-201ENST00000312295 MPLKIPQ8TAP9 179 aa8.65□□□□□ -1.02
RTP1-201ENST00000312295 LIMD2Q9BT23 127 aa8.65□□□□□ -1.03
RTP1-201ENST00000312295 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
RTP1-201ENST00000312295 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
RTP1-201ENST00000312295 SPINK1P00995 79 aa8.63□□□□□ -1.03
RTP1-201ENST00000312295 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
RTP1-201ENST00000312295 C8orf17Q9NRJ1 99 aa8.62□□□□□ -1.03
RTP1-201ENST00000312295 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
RTP1-201ENST00000312295 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
RTP1-201ENST00000312295 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
RTP1-201ENST00000312295 Q1T7F1 81 aa8.6□□□□□ -1.03
RTP1-201ENST00000312295 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
RTP1-201ENST00000312295 Q8N1X5 172 aa8.58□□□□□ -1.04
RTP1-201ENST00000312295 J3QL48 77 aa8.58□□□□□ -1.04
RTP1-201ENST00000312295 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
RTP1-201ENST00000312295 NDUFS5O43920 106 aa8.55□□□□□ -1.04
RTP1-201ENST00000312295 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
RTP1-201ENST00000312295 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
RTP1-201ENST00000312295 MP68P56378 58 aa8.51□□□□□ -1.05
RTP1-201ENST00000312295 TRAV22A0A0B4J277 110 aa8.5□□□□□ -1.05
RTP1-201ENST00000312295 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
RTP1-201ENST00000312295 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
RTP1-201ENST00000312295 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
RTP1-201ENST00000312295 LINC00313P59037 77 aa8.49□□□□□ -1.05
RTP1-201ENST00000312295 H3BPC8 53 aa8.49□□□□□ -1.05
RTP1-201ENST00000312295 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
RTP1-201ENST00000312295 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
RTP1-201ENST00000312295 BIRC6Q9NR09 4857 aa8.47□□□□□ -1.05
RTP1-201ENST00000312295 C8orf87E5RJ46 101 aa8.46□□□□□ -1.06
RTP1-201ENST00000312295 V9GYY9 64 aa8.46□□□□□ -1.06
RTP1-201ENST00000312295 H0Y9P7 68 aa8.45□□□□□ -1.06
RTP1-201ENST00000312295 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
RTP1-201ENST00000312295 PRR4Q16378 134 aa8.44□□□□□ -1.06
RTP1-201ENST00000312295 LINC00208Q96KT6 92 aa8.44□□□□□ -1.06
RTP1-201ENST00000312295 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
RTP1-201ENST00000312295 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
RTP1-201ENST00000312295 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
RTP1-201ENST00000312295 PSPHP1O15172 72 aa8.4□□□□□ -1.06
RTP1-201ENST00000312295 HERC2O95714 4834 aa8.39□□□□□ -1.07
RTP1-201ENST00000312295 Q5W150 140 aa8.38□□□□□ -1.07
RTP1-201ENST00000312295 TP53AIP1Q9HCN2 124 aa8.38□□□□□ -1.07
RTP1-201ENST00000312295 A8MUN3 132 aa8.35□□□□□ -1.07
RTP1-201ENST00000312295 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
RTP1-201ENST00000312295 Q5VV11 94 aa8.34□□□□□ -1.07
RTP1-201ENST00000312295 PMAIP1Q13794 54 aa8.3□□□□□ -1.08
RTP1-201ENST00000312295 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
RTP1-201ENST00000312295 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
RTP1-201ENST00000312295 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
RTP1-201ENST00000312295 LOC101927531A0A1B0GV80 90 aa8.25□□□□□ -1.09
RTP1-201ENST00000312295 COA5Q86WW8 74 aa8.25□□□□□ -1.09
RTP1-201ENST00000312295 SEC61GP60059 68 aa8.24□□□□□ -1.09
RTP1-201ENST00000312295 LCE2AQ5TA79 106 aaPredicted RBP8.23□□□□□ -1.09
RTP1-201ENST00000312295 Q75L30 129 aa8.23□□□□□ -1.09
RTP1-201ENST00000312295 CHKB-CPT1BH3BT56 60 aa8.23□□□□□ -1.09
RTP1-201ENST00000312295 PCLOQ9Y6V0 5065 aa8.22□□□□□ -1.09
RTP1-201ENST00000312295 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
RTP1-201ENST00000312295 LPAP08519 4548 aa8.2□□□□□ -1.1
RTP1-201ENST00000312295 IGKV2D-30A0A075B6S6 120 aa8.2□□□□□ -1.1
RTP1-201ENST00000312295 A8MU10 97 aa8.2□□□□□ -1.1
RTP1-201ENST00000312295 IGKV2-30P06310 120 aa8.2□□□□□ -1.1
RTP1-201ENST00000312295 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
RTP1-201ENST00000312295 A8MUU9 505 aa8.18□□□□□ -1.1
RTP1-201ENST00000312295 LCE2CQ5TA81 110 aa8.17□□□□□ -1.1
RTP1-201ENST00000312295 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
RTP1-201ENST00000312295 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.1
RTP1-201ENST00000312295 LCA10Q71F78 164 aa8.14□□□□□ -1.11
RTP1-201ENST00000312295 XP32Q5T750 250 aa8.13□□□□□ -1.11
RTP1-201ENST00000312295 A6NED7 52 aa8.11□□□□□ -1.11
RTP1-201ENST00000312295 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms