RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
CCS-201ENST00000310190 K7EP34 96 aa9.42□□□□□ -0.9
CCS-201ENST00000310190 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
CCS-201ENST00000310190 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
CCS-201ENST00000310190 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
CCS-201ENST00000310190 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
CCS-201ENST00000310190 DSCR10P59022 87 aa9.4□□□□□ -0.9
CCS-201ENST00000310190 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
CCS-201ENST00000310190 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
CCS-201ENST00000310190 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
CCS-201ENST00000310190 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
CCS-201ENST00000310190 NOTCH2NLQ7Z3S9 236 aa9.36□□□□□ -0.91
CCS-201ENST00000310190 GTF2H5Q6ZYL4 71 aa9.35□□□□□ -0.91
CCS-201ENST00000310190 IGHV6-1A0A0B4J1U7 121 aa9.34□□□□□ -0.91
CCS-201ENST00000310190 A8MWP4 228 aa9.34□□□□□ -0.91
CCS-201ENST00000310190 NREPQ16612 68 aa9.34□□□□□ -0.91
CCS-201ENST00000310190 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
CCS-201ENST00000310190 NDUFB1O75438 58 aa9.33□□□□□ -0.92
CCS-201ENST00000310190 F8W1H4 67 aa9.3□□□□□ -0.92
CCS-201ENST00000310190 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
CCS-201ENST00000310190 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
CCS-201ENST00000310190 PRR15Q8IV56 129 aa9.28□□□□□ -0.92
CCS-201ENST00000310190 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
CCS-201ENST00000310190 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
CCS-201ENST00000310190 Q6ZVQ6 151 aa9.22□□□□□ -0.93
CCS-201ENST00000310190 BPY2O14599 106 aa9.18□□□□□ -0.94
CCS-201ENST00000310190 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
CCS-201ENST00000310190 MT1HP80294 61 aa9.16□□□□□ -0.94
CCS-201ENST00000310190 TMEM254Q8TBM7 123 aa9.16□□□□□ -0.94
CCS-201ENST00000310190 LINC00846Q9NV44 126 aa9.16□□□□□ -0.94
CCS-201ENST00000310190 K7EQZ3 153 aa9.15□□□□□ -0.94
CCS-201ENST00000310190 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
CCS-201ENST00000310190 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
CCS-201ENST00000310190 UBL5Q9BZL1 73 aa9.14□□□□□ -0.95
CCS-201ENST00000310190 A0A1B0GV90 55 aa9.13□□□□□ -0.95
CCS-201ENST00000310190 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
CCS-201ENST00000310190 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
CCS-201ENST00000310190 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
CCS-201ENST00000310190 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
CCS-201ENST00000310190 HRES1P13985 223 aa9.07□□□□□ -0.96
CCS-201ENST00000310190 FAM240AA0A1B0GVK7 77 aa9.03□□□□□ -0.96
CCS-201ENST00000310190 ACYP1P07311 99 aa9.03□□□□□ -0.96
CCS-201ENST00000310190 CXCL6P80162 114 aa9.03□□□□□ -0.96
CCS-201ENST00000310190 SPINK7P58062 85 aa9□□□□□ -0.97
CCS-201ENST00000310190 Q8N9L7 120 aa9□□□□□ -0.97
CCS-201ENST00000310190 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
CCS-201ENST00000310190 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
CCS-201ENST00000310190 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
CCS-201ENST00000310190 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.97
CCS-201ENST00000310190 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
CCS-201ENST00000310190 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
CCS-201ENST00000310190 WFDC13Q8IUB5 93 aa8.93□□□□□ -0.98
CCS-201ENST00000310190 NDUFS5O43920 106 aa8.91□□□□□ -0.98
CCS-201ENST00000310190 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
CCS-201ENST00000310190 M0R2T5 61 aa8.89□□□□□ -0.99
CCS-201ENST00000310190 ATP5EP2Q5VTU8 51 aa8.89□□□□□ -0.99
CCS-201ENST00000310190 Q5W150 140 aa8.89□□□□□ -0.99
CCS-201ENST00000310190 CRCT1Q9UGL9 99 aa8.88□□□□□ -0.99
CCS-201ENST00000310190 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
CCS-201ENST00000310190 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
CCS-201ENST00000310190 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
CCS-201ENST00000310190 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
CCS-201ENST00000310190 J3QR89 54 aa8.79□□□□□ -1
CCS-201ENST00000310190 LINC00643Q86TS7 51 aa8.79□□□□□ -1
CCS-201ENST00000310190 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
CCS-201ENST00000310190 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
CCS-201ENST00000310190 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
CCS-201ENST00000310190 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
CCS-201ENST00000310190 HIST1H4AP62805 103 aaKnown RBP8.68□□□□□ -1.02
CCS-201ENST00000310190 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
CCS-201ENST00000310190 K7ERU9 68 aa8.61□□□□□ -1.03
CCS-201ENST00000310190 UQCRQO14949 82 aa8.61□□□□□ -1.03
CCS-201ENST00000310190 MT2AP02795 61 aa8.61□□□□□ -1.03
CCS-201ENST00000310190 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
CCS-201ENST00000310190 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
CCS-201ENST00000310190 A0A087WVE0 104 aa8.58□□□□□ -1.04
CCS-201ENST00000310190 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
CCS-201ENST00000310190 ATOX1O00244 68 aa8.56□□□□□ -1.04
CCS-201ENST00000310190 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
CCS-201ENST00000310190 MT1FP04733 61 aa8.52□□□□□ -1.05
CCS-201ENST00000310190 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
CCS-201ENST00000310190 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
CCS-201ENST00000310190 IMUPQ9GZP8 106 aa8.49□□□□□ -1.05
CCS-201ENST00000310190 H0Y9P7 68 aa8.48□□□□□ -1.05
CCS-201ENST00000310190 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
CCS-201ENST00000310190 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
CCS-201ENST00000310190 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
CCS-201ENST00000310190 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
CCS-201ENST00000310190 H3BPC8 53 aa8.4□□□□□ -1.06
CCS-201ENST00000310190 S4R3F8 94 aa8.39□□□□□ -1.07
CCS-201ENST00000310190 USH2AO75445 5202 aa8.38□□□□□ -1.07
CCS-201ENST00000310190 MP68P56378 58 aa8.38□□□□□ -1.07
CCS-201ENST00000310190 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
CCS-201ENST00000310190 SCGB1A1P11684 91 aa8.37□□□□□ -1.07
CCS-201ENST00000310190 LINC00208Q96KT6 92 aa8.36□□□□□ -1.07
CCS-201ENST00000310190 LCA10Q71F78 164 aa8.35□□□□□ -1.07
CCS-201ENST00000310190 A8MUN3 132 aa8.34□□□□□ -1.07
CCS-201ENST00000310190 LCE2BO14633 110 aa8.34□□□□□ -1.07
CCS-201ENST00000310190 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
CCS-201ENST00000310190 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms