RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 TNP1P09430 55 aa4.25□□□□□ -1.73
RSF1-201ENST00000308488 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
RSF1-201ENST00000308488 LAMA2P24043 3122 aaKnown RBP4.25□□□□□ -1.73
RSF1-201ENST00000308488 ALMS1Q8TCU4 4167 aa4.23□□□□□ -1.73
RSF1-201ENST00000308488 TNRC18O15417 2968 aaPredicted RBP4.23□□□□□ -1.73
RSF1-201ENST00000308488 TENM2Q9NT68 2774 aa4.22□□□□□ -1.73
RSF1-201ENST00000308488 DMXL2Q8TDJ6 3036 aa4.22□□□□□ -1.73
RSF1-201ENST00000308488 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
RSF1-201ENST00000308488 INE1O15225 51 aa4.18□□□□□ -1.74
RSF1-201ENST00000308488 KRTAP1-3Q8IUG1 177 aa4.17□□□□□ -1.74
RSF1-201ENST00000308488 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
RSF1-201ENST00000308488 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
RSF1-201ENST00000308488 SMR3BP02814 79 aaPredicted RBP4.14□□□□□ -1.75
RSF1-201ENST00000308488 KRTAP13-2Q52LG2 175 aa4.14□□□□□ -1.75
RSF1-201ENST00000308488 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
RSF1-201ENST00000308488 ATMQ13315 3056 aa4.14□□□□□ -1.75
RSF1-201ENST00000308488 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
RSF1-201ENST00000308488 PCNTO95613 3336 aa4.12□□□□□ -1.75
RSF1-201ENST00000308488 VPS13AQ96RL7 3174 aa4.1□□□□□ -1.75
RSF1-201ENST00000308488 DMXL1Q9Y485 3027 aa4.09□□□□□ -1.75
RSF1-201ENST00000308488 C5orf42Q9H799 3197 aa4.08□□□□□ -1.76
RSF1-201ENST00000308488 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
RSF1-201ENST00000308488 KRTAP10-1P60331 282 aa4.05□□□□□ -1.76
RSF1-201ENST00000308488 COL7A1Q02388 2944 aa4.05□□□□□ -1.76
RSF1-201ENST00000308488 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
RSF1-201ENST00000308488 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
RSF1-201ENST00000308488 EP400Q96L91 3159 aa4.02□□□□□ -1.77
RSF1-201ENST00000308488 FREM2Q5SZK8 3169 aa4.02□□□□□ -1.77
RSF1-201ENST00000308488 LAMA1P25391 3075 aa4.01□□□□□ -1.77
RSF1-201ENST00000308488 OTOGQ6ZRI0 2925 aa4.01□□□□□ -1.77
RSF1-201ENST00000308488 CELSR1Q9NYQ6 3014 aa4□□□□□ -1.77
RSF1-201ENST00000308488 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
RSF1-201ENST00000308488 XP32Q5T750 250 aa3.99□□□□□ -1.77
RSF1-201ENST00000308488 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
RSF1-201ENST00000308488 Q5VSD8 79 aa3.96□□□□□ -1.78
RSF1-201ENST00000308488 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
RSF1-201ENST00000308488 ADGRG4Q8IZF6 3080 aa3.95□□□□□ -1.78
RSF1-201ENST00000308488 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
RSF1-201ENST00000308488 M0R2T5 61 aa3.95□□□□□ -1.78
RSF1-201ENST00000308488 HTTP42858 3142 aa3.94□□□□□ -1.78
RSF1-201ENST00000308488 AKAP9Q99996 3911 aa3.87□□□□□ -1.79
RSF1-201ENST00000308488 WDFY4Q6ZS81 3184 aa3.86□□□□□ -1.79
RSF1-201ENST00000308488 NBPF19A0A087WUL8 3843 aa3.86□□□□□ -1.79
RSF1-201ENST00000308488 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
RSF1-201ENST00000308488 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
RSF1-201ENST00000308488 BOD1L1Q8NFC6 3051 aa3.81□□□□□ -1.8
RSF1-201ENST00000308488 FBN1P35555 2871 aaKnown RBP3.8□□□□□ -1.8
RSF1-201ENST00000308488 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
RSF1-201ENST00000308488 DNAH3Q8TD57 4116 aa3.77□□□□□ -1.81
RSF1-201ENST00000308488 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
RSF1-201ENST00000308488 RANBP2P49792 3224 aaKnown RBP3.75□□□□□ -1.81
RSF1-201ENST00000308488 KRTAP3-2Q9BYR7 98 aa3.71□□□□□ -1.82
RSF1-201ENST00000308488 MKI67P46013 3256 aaKnown RBP3.66□□□□□ -1.82
RSF1-201ENST00000308488 BSNQ9UPA5 3926 aa3.64□□□□□ -1.83
RSF1-201ENST00000308488 REV3LO60673 3130 aa3.61□□□□□ -1.83
RSF1-201ENST00000308488 XIRP2A4UGR9 3374 aa3.61□□□□□ -1.83
RSF1-201ENST00000308488 COL6A3P12111 3177 aa3.59□□□□□ -1.83
RSF1-201ENST00000308488 GOLGB1Q14789 3259 aaKnown RBP3.59□□□□□ -1.84
RSF1-201ENST00000308488 CFAP47Q6ZTR5 3102 aa3.58□□□□□ -1.84
RSF1-201ENST00000308488 KRTAP3-3Q9BYR6 98 aa3.56□□□□□ -1.84
RSF1-201ENST00000308488 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
RSF1-201ENST00000308488 LYSTQ99698 3801 aa3.53□□□□□ -1.84
RSF1-201ENST00000308488 UTRNP46939 3433 aa3.52□□□□□ -1.85
RSF1-201ENST00000308488 ANK2Q01484 3957 aa3.51□□□□□ -1.85
RSF1-201ENST00000308488 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
RSF1-201ENST00000308488 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
RSF1-201ENST00000308488 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
RSF1-201ENST00000308488 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
RSF1-201ENST00000308488 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
RSF1-201ENST00000308488 KRTAP10-10P60014 251 aa3.42□□□□□ -1.86
RSF1-201ENST00000308488 DNAH10Q8IVF4 4471 aa3.38□□□□□ -1.87
RSF1-201ENST00000308488 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
RSF1-201ENST00000308488 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
RSF1-201ENST00000308488 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
RSF1-201ENST00000308488 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
RSF1-201ENST00000308488 VCANP13611 3396 aa3.35□□□□□ -1.87
RSF1-201ENST00000308488 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
RSF1-201ENST00000308488 DNAH1Q9P2D7 4330 aa3.34□□□□□ -1.87
RSF1-201ENST00000308488 SPENQ96T58 3664 aaKnown RBP3.34□□□□□ -1.88
RSF1-201ENST00000308488 CELSR3Q9NYQ7 3312 aa3.34□□□□□ -1.88
RSF1-201ENST00000308488 UNC80Q8N2C7 3258 aa3.33□□□□□ -1.88
RSF1-201ENST00000308488 DNAH6Q9C0G6 4158 aa3.32□□□□□ -1.88
RSF1-201ENST00000308488 DNAH14Q0VDD8 3507 aa3.31□□□□□ -1.88
RSF1-201ENST00000308488 DMDP11532 3685 aa3.31□□□□□ -1.88
RSF1-201ENST00000308488 VPS13CQ709C8 3753 aa3.31□□□□□ -1.88
RSF1-201ENST00000308488 LAMA5O15230 3695 aa3.3□□□□□ -1.88
RSF1-201ENST00000308488 SMG1Q96Q15 3661 aaKnown RBP3.27□□□□□ -1.89
RSF1-201ENST00000308488 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
RSF1-201ENST00000308488 MYO15AQ9UKN7 3530 aa3.26□□□□□ -1.89
RSF1-201ENST00000308488 USP34Q70CQ2 3546 aa3.25□□□□□ -1.89
RSF1-201ENST00000308488 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
RSF1-201ENST00000308488 SPEGQ15772 3267 aa3.21□□□□□ -1.9
RSF1-201ENST00000308488 DCHS1Q96JQ0 3298 aa3.18□□□□□ -1.9
RSF1-201ENST00000308488 FRAS1Q86XX4 4008 aa3.18□□□□□ -1.9
RSF1-201ENST00000308488 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
RSF1-201ENST00000308488 BRCA2P51587 3418 aa3.15□□□□□ -1.9
RSF1-201ENST00000308488 ZFHX4Q86UP3 3567 aa3.15□□□□□ -1.91
RSF1-201ENST00000308488 EYSQ5T1H1 3165 aa3.13□□□□□ -1.91
RSF1-201ENST00000308488 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
RSF1-201ENST00000308488 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms