RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
PTCD2-201ENST00000308077 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
PTCD2-201ENST00000308077 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
PTCD2-201ENST00000308077 FAM236AA0A1B0GUQ0 79 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 FAM236BA0A1B0GV22 79 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 IMUPQ9GZP8 106 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 ATP5EP2Q5VTU8 51 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 Q8N9L7 120 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
PTCD2-201ENST00000308077 HIST1H4AP62805 103 aaKnown RBP4.03□□□□□ -1.76
PTCD2-201ENST00000308077 CD164Q04900 197 aa4.03□□□□□ -1.76
PTCD2-201ENST00000308077 CXCL6P80162 114 aa4.03□□□□□ -1.76
PTCD2-201ENST00000308077 DEFB116Q30KQ4 102 aa4.03□□□□□ -1.76
PTCD2-201ENST00000308077 Q96NJ1 140 aa4.03□□□□□ -1.76
PTCD2-201ENST00000308077 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
PTCD2-201ENST00000308077 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
PTCD2-201ENST00000308077 BPY2O14599 106 aa4.02□□□□□ -1.77
PTCD2-201ENST00000308077 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
PTCD2-201ENST00000308077 LRP1Q07954 4544 aaKnown RBP4.01□□□□□ -1.77
PTCD2-201ENST00000308077 DSCR10P59022 87 aa4.01□□□□□ -1.77
PTCD2-201ENST00000308077 ANAPC13Q9BS18 74 aa4.01□□□□□ -1.77
PTCD2-201ENST00000308077 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
PTCD2-201ENST00000308077 IGKV4-1P06312 121 aa4□□□□□ -1.77
PTCD2-201ENST00000308077 TNXBP22105 4242 aa4□□□□□ -1.77
PTCD2-201ENST00000308077 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
PTCD2-201ENST00000308077 NEBP20929 6669 aa4□□□□□ -1.77
PTCD2-201ENST00000308077 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
PTCD2-201ENST00000308077 K7EQZ3 153 aa3.99□□□□□ -1.77
PTCD2-201ENST00000308077 Q5XG85 94 aa3.99□□□□□ -1.77
PTCD2-201ENST00000308077 ASB16-AS1Q495Z4 193 aa3.98□□□□□ -1.77
PTCD2-201ENST00000308077 SPINK1P00995 79 aa3.97□□□□□ -1.77
PTCD2-201ENST00000308077 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
PTCD2-201ENST00000308077 A8MWP4 228 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 J3KT08 172 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 LIMD2Q9BT23 127 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 RPS29P62273 56 aaKnown RBP3.96□□□□□ -1.78
PTCD2-201ENST00000308077 SPAG11AQ6PDA7 123 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
PTCD2-201ENST00000308077 PRR15Q8IV56 129 aa3.95□□□□□ -1.78
PTCD2-201ENST00000308077 ATOX1O00244 68 aa3.95□□□□□ -1.78
PTCD2-201ENST00000308077 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
PTCD2-201ENST00000308077 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
PTCD2-201ENST00000308077 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
PTCD2-201ENST00000308077 IGHV6-1A0A0B4J1U7 121 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 MMP24-AS1A0A0U1RRL7 71 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 HCG22E2RYF7 251 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 NDUFB1O75438 58 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 COX7CP15954 63 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 LRP2P98164 4655 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
PTCD2-201ENST00000308077 WFDC13Q8IUB5 93 aa3.91□□□□□ -1.78
PTCD2-201ENST00000308077 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
PTCD2-201ENST00000308077 RETNLBQ9BQ08 111 aa3.9□□□□□ -1.78
PTCD2-201ENST00000308077 UQCRQO14949 82 aa3.9□□□□□ -1.79
PTCD2-201ENST00000308077 OXTP01178 125 aa3.9□□□□□ -1.79
PTCD2-201ENST00000308077 CASC2Q6XLA1 102 aa3.89□□□□□ -1.79
PTCD2-201ENST00000308077 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
PTCD2-201ENST00000308077 TRAV7A0A075B6U4 112 aa3.89□□□□□ -1.79
PTCD2-201ENST00000308077 hDV103S1A0JD37 113 aa3.88□□□□□ -1.79
PTCD2-201ENST00000308077 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
PTCD2-201ENST00000308077 C8orf87E5RJ46 101 aa3.87□□□□□ -1.79
PTCD2-201ENST00000308077 C20orf197Q8N268 126 aa3.86□□□□□ -1.79
PTCD2-201ENST00000308077 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
PTCD2-201ENST00000308077 LINC00313P59037 77 aa3.86□□□□□ -1.79
PTCD2-201ENST00000308077 TMEM254Q8TBM7 123 aa3.86□□□□□ -1.79
PTCD2-201ENST00000308077 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
PTCD2-201ENST00000308077 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
PTCD2-201ENST00000308077 SMIM20Q8N5G0 67 aa3.85□□□□□ -1.79
PTCD2-201ENST00000308077 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
PTCD2-201ENST00000308077 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
PTCD2-201ENST00000308077 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
PTCD2-201ENST00000308077 NDUFS5O43920 106 aa3.82□□□□□ -1.8
PTCD2-201ENST00000308077 FP248Q71RG6 208 aaPredicted RBP3.82□□□□□ -1.8
PTCD2-201ENST00000308077 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
PTCD2-201ENST00000308077 KLKP1Q107X0 134 aa3.8□□□□□ -1.8
PTCD2-201ENST00000308077 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
PTCD2-201ENST00000308077 H7BZZ5 65 aa3.8□□□□□ -1.8
PTCD2-201ENST00000308077 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
PTCD2-201ENST00000308077 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
PTCD2-201ENST00000308077 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
PTCD2-201ENST00000308077 TP53AIP1Q9HCN2 124 aa3.79□□□□□ -1.8
PTCD2-201ENST00000308077 SYNE2Q8WXH0 6885 aaKnown RBP3.79□□□□□ -1.8
PTCD2-201ENST00000308077 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
PTCD2-201ENST00000308077 Q5W150 140 aa3.79□□□□□ -1.8
PTCD2-201ENST00000308077 PRR4Q16378 134 aa3.78□□□□□ -1.8
PTCD2-201ENST00000308077 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.81
PTCD2-201ENST00000308077 H0Y9P7 68 aa3.78□□□□□ -1.81
PTCD2-201ENST00000308077 C5orf47Q569G3 176 aa3.78□□□□□ -1.81
PTCD2-201ENST00000308077 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.81
PTCD2-201ENST00000308077 A8MUU9 505 aa3.77□□□□□ -1.81
PTCD2-201ENST00000308077 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
PTCD2-201ENST00000308077 LINC00208Q96KT6 92 aa3.75□□□□□ -1.81
PTCD2-201ENST00000308077 MP68P56378 58 aa3.75□□□□□ -1.81
PTCD2-201ENST00000308077 TMEM258P61165 79 aa3.75□□□□□ -1.81
PTCD2-201ENST00000308077 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
PTCD2-201ENST00000308077 Q75L30 129 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms