RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 FAM229BQ4G0N7 80 aa9.57□□□□□ -0.88
TVP23B-201ENST00000307767 TRAV22A0A0B4J277 110 aa9.56□□□□□ -0.88
TVP23B-201ENST00000307767 MP68P56378 58 aa9.56□□□□□ -0.88
TVP23B-201ENST00000307767 SPINK6Q6UWN8 80 aa9.54□□□□□ -0.88
TVP23B-201ENST00000307767 A0A1B0GVY2 172 aa9.54□□□□□ -0.88
TVP23B-201ENST00000307767 H3BPC8 53 aa9.52□□□□□ -0.88
TVP23B-201ENST00000307767 CDK2AP2O75956 126 aa9.51□□□□□ -0.89
TVP23B-201ENST00000307767 FP248Q71RG6 208 aaPredicted RBP9.51□□□□□ -0.89
TVP23B-201ENST00000307767 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
TVP23B-201ENST00000307767 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
TVP23B-201ENST00000307767 C1orf64Q8NEQ6 169 aa9.49□□□□□ -0.89
TVP23B-201ENST00000307767 LINC00336Q6ZUF6 198 aa9.49□□□□□ -0.89
TVP23B-201ENST00000307767 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
TVP23B-201ENST00000307767 C1orf195Q5TG92 126 aa9.48□□□□□ -0.89
TVP23B-201ENST00000307767 KMT2CQ8NEZ4 4911 aaKnown RBP9.48□□□□□ -0.89
TVP23B-201ENST00000307767 CYP4F30PQ9H0H9 118 aa9.47□□□□□ -0.89
TVP23B-201ENST00000307767 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
TVP23B-201ENST00000307767 PRR4Q16378 134 aa9.46□□□□□ -0.89
TVP23B-201ENST00000307767 SMIM26A0A096LP01 95 aa9.46□□□□□ -0.9
TVP23B-201ENST00000307767 FAT1Q14517 4588 aa9.46□□□□□ -0.9
TVP23B-201ENST00000307767 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
TVP23B-201ENST00000307767 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
TVP23B-201ENST00000307767 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
TVP23B-201ENST00000307767 NDUFS5O43920 106 aa9.42□□□□□ -0.9
TVP23B-201ENST00000307767 Q5W150 140 aa9.41□□□□□ -0.9
TVP23B-201ENST00000307767 SPANXA2-OT1Q8N9U9 137 aa9.41□□□□□ -0.9
TVP23B-201ENST00000307767 SMR3BP02814 79 aaPredicted RBP9.41□□□□□ -0.9
TVP23B-201ENST00000307767 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
TVP23B-201ENST00000307767 TYMSOSQ8TAI1 123 aa9.37□□□□□ -0.91
TVP23B-201ENST00000307767 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
TVP23B-201ENST00000307767 PRR26Q8N8Z3 221 aa9.36□□□□□ -0.91
TVP23B-201ENST00000307767 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
TVP23B-201ENST00000307767 LINC00313P59037 77 aa9.35□□□□□ -0.91
TVP23B-201ENST00000307767 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
TVP23B-201ENST00000307767 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
TVP23B-201ENST00000307767 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
TVP23B-201ENST00000307767 LIMD2Q9BT23 127 aa9.33□□□□□ -0.92
TVP23B-201ENST00000307767 SPINK1P00995 79 aa9.32□□□□□ -0.92
TVP23B-201ENST00000307767 MPLKIPQ8TAP9 179 aa9.28□□□□□ -0.92
TVP23B-201ENST00000307767 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
TVP23B-201ENST00000307767 LINC00304Q8N9R0 145 aa9.26□□□□□ -0.93
TVP23B-201ENST00000307767 LOC101927531A0A1B0GV80 90 aa9.25□□□□□ -0.93
TVP23B-201ENST00000307767 RYR3Q15413 4870 aa9.25□□□□□ -0.93
TVP23B-201ENST00000307767 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
TVP23B-201ENST00000307767 Q1T7F1 81 aa9.21□□□□□ -0.93
TVP23B-201ENST00000307767 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
TVP23B-201ENST00000307767 SPAG11AQ6PDA7 123 aa9.19□□□□□ -0.94
TVP23B-201ENST00000307767 RETNLBQ9BQ08 111 aa9.19□□□□□ -0.94
TVP23B-201ENST00000307767 COA5Q86WW8 74 aa9.19□□□□□ -0.94
TVP23B-201ENST00000307767 HSPG2P98160 4391 aa9.16□□□□□ -0.94
TVP23B-201ENST00000307767 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
TVP23B-201ENST00000307767 HRES1P13985 223 aa9.14□□□□□ -0.95
TVP23B-201ENST00000307767 RYR1P21817 5038 aa9.13□□□□□ -0.95
TVP23B-201ENST00000307767 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
TVP23B-201ENST00000307767 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
TVP23B-201ENST00000307767 TNXBP22105 4242 aa9.09□□□□□ -0.95
TVP23B-201ENST00000307767 PSPHP1O15172 72 aa9.06□□□□□ -0.96
TVP23B-201ENST00000307767 A8MUN3 132 aa9.04□□□□□ -0.96
TVP23B-201ENST00000307767 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
TVP23B-201ENST00000307767 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.96
TVP23B-201ENST00000307767 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
TVP23B-201ENST00000307767 V9GYY9 64 aa9.01□□□□□ -0.97
TVP23B-201ENST00000307767 Q8N1X5 172 aa9.01□□□□□ -0.97
TVP23B-201ENST00000307767 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
TVP23B-201ENST00000307767 KRTAP10-8P60410 259 aa9□□□□□ -0.97
TVP23B-201ENST00000307767 Q5VV11 94 aa9□□□□□ -0.97
TVP23B-201ENST00000307767 C9orf92A6NGG3 77 aa9□□□□□ -0.97
TVP23B-201ENST00000307767 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
TVP23B-201ENST00000307767 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
TVP23B-201ENST00000307767 A8MUU9 505 aa8.98□□□□□ -0.97
TVP23B-201ENST00000307767 Q5VSD8 79 aa8.98□□□□□ -0.97
TVP23B-201ENST00000307767 ACYP2P14621 99 aa8.96□□□□□ -0.98
TVP23B-201ENST00000307767 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
TVP23B-201ENST00000307767 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
TVP23B-201ENST00000307767 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
TVP23B-201ENST00000307767 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
TVP23B-201ENST00000307767 EPPK1P58107 5090 aaKnown RBP8.9□□□□□ -0.98
TVP23B-201ENST00000307767 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
TVP23B-201ENST00000307767 Q75L30 129 aa8.86□□□□□ -0.99
TVP23B-201ENST00000307767 A8MU10 97 aa8.85□□□□□ -0.99
TVP23B-201ENST00000307767 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
TVP23B-201ENST00000307767 MYCBP2O75592 4640 aa8.82□□□□□ -1
TVP23B-201ENST00000307767 MT1HL1P0DM35 61 aa8.81□□□□□ -1
TVP23B-201ENST00000307767 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1
TVP23B-201ENST00000307767 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1.01
TVP23B-201ENST00000307767 SPINK7P58062 85 aa8.76□□□□□ -1.01
TVP23B-201ENST00000307767 LCA10Q71F78 164 aa8.76□□□□□ -1.01
TVP23B-201ENST00000307767 A6NED7 52 aa8.69□□□□□ -1.02
TVP23B-201ENST00000307767 XP32Q5T750 250 aa8.67□□□□□ -1.02
TVP23B-201ENST00000307767 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
TVP23B-201ENST00000307767 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
TVP23B-201ENST00000307767 CDC42SE1Q9NRR8 79 aa8.63□□□□□ -1.03
TVP23B-201ENST00000307767 A0A1B0GU69 56 aa8.61□□□□□ -1.03
TVP23B-201ENST00000307767 ATP11AUNQ6ZP68 121 aa8.59□□□□□ -1.03
TVP23B-201ENST00000307767 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
TVP23B-201ENST00000307767 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
TVP23B-201ENST00000307767 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
TVP23B-201ENST00000307767 LRP2P98164 4655 aa8.49□□□□□ -1.05
TVP23B-201ENST00000307767 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
TVP23B-201ENST00000307767 LPAP08519 4548 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms