RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
PCDHB1-201ENST00000306549 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
PCDHB1-201ENST00000306549 M0QZ58 72 aa5.05□□□□□ -1.6
PCDHB1-201ENST00000306549 KRTAP26-1Q6PEX3 210 aa5.05□□□□□ -1.6
PCDHB1-201ENST00000306549 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
PCDHB1-201ENST00000306549 RPL37P61927 97 aaKnown RBP5.03□□□□□ -1.6
PCDHB1-201ENST00000306549 KRTAP10-1P60331 282 aa5.03□□□□□ -1.6
PCDHB1-201ENST00000306549 MYO15AQ9UKN7 3530 aa5.02□□□□□ -1.61
PCDHB1-201ENST00000306549 LINC01558Q9Y6Z2 57 aa5.01□□□□□ -1.61
PCDHB1-201ENST00000306549 Q5W150 140 aa5.01□□□□□ -1.61
PCDHB1-201ENST00000306549 MMP24-AS1A0A0U1RRL7 71 aa5.01□□□□□ -1.61
PCDHB1-201ENST00000306549 ASB16-AS1Q495Z4 193 aa5□□□□□ -1.61
PCDHB1-201ENST00000306549 ROMO1P60602 79 aa5□□□□□ -1.61
PCDHB1-201ENST00000306549 ZFHX3Q15911 3703 aa4.99□□□□□ -1.61
PCDHB1-201ENST00000306549 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
PCDHB1-201ENST00000306549 KRTAP10-2P60368 255 aa4.98□□□□□ -1.61
PCDHB1-201ENST00000306549 Q6ZRN7 208 aaPredicted RBP4.97□□□□□ -1.61
PCDHB1-201ENST00000306549 Q5XG85 94 aa4.96□□□□□ -1.62
PCDHB1-201ENST00000306549 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
PCDHB1-201ENST00000306549 VWFP04275 2813 aa4.94□□□□□ -1.62
PCDHB1-201ENST00000306549 ADM2Q7Z4H4 148 aa4.94□□□□□ -1.62
PCDHB1-201ENST00000306549 TENM2Q9NT68 2774 aa4.93□□□□□ -1.62
PCDHB1-201ENST00000306549 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
PCDHB1-201ENST00000306549 LAMA5O15230 3695 aa4.9□□□□□ -1.63
PCDHB1-201ENST00000306549 DCHS1Q96JQ0 3298 aa4.89□□□□□ -1.63
PCDHB1-201ENST00000306549 PANO1I0J062 215 aa4.88□□□□□ -1.63
PCDHB1-201ENST00000306549 MUC3AQ02505 3323 aa4.87□□□□□ -1.63
PCDHB1-201ENST00000306549 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
PCDHB1-201ENST00000306549 DMDP11532 3685 aa4.85□□□□□ -1.63
PCDHB1-201ENST00000306549 WDFY3Q8IZQ1 3526 aa4.84□□□□□ -1.63
PCDHB1-201ENST00000306549 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
PCDHB1-201ENST00000306549 OTOGQ6ZRI0 2925 aa4.84□□□□□ -1.64
PCDHB1-201ENST00000306549 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
PCDHB1-201ENST00000306549 Q5VV11 94 aa4.83□□□□□ -1.64
PCDHB1-201ENST00000306549 Q8NDZ9 215 aa4.82□□□□□ -1.64
PCDHB1-201ENST00000306549 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
PCDHB1-201ENST00000306549 H3BS24 57 aa4.82□□□□□ -1.64
PCDHB1-201ENST00000306549 A8MUU9 505 aa4.81□□□□□ -1.64
PCDHB1-201ENST00000306549 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
PCDHB1-201ENST00000306549 A0A087X002 238 aa4.79□□□□□ -1.64
PCDHB1-201ENST00000306549 RELNP78509 3460 aa4.78□□□□□ -1.64
PCDHB1-201ENST00000306549 KRTAP13-1Q8IUC0 172 aa4.77□□□□□ -1.65
PCDHB1-201ENST00000306549 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
PCDHB1-201ENST00000306549 TNP1P09430 55 aa4.76□□□□□ -1.65
PCDHB1-201ENST00000306549 ASPMQ8IZT6 3477 aa4.76□□□□□ -1.65
PCDHB1-201ENST00000306549 ZFHX4Q86UP3 3567 aa4.75□□□□□ -1.65
PCDHB1-201ENST00000306549 KRTAP16-1A8MUX0 517 aa4.74□□□□□ -1.65
PCDHB1-201ENST00000306549 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
PCDHB1-201ENST00000306549 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
PCDHB1-201ENST00000306549 BSNQ9UPA5 3926 aa4.68□□□□□ -1.66
PCDHB1-201ENST00000306549 TPRXLQ17RH7 258 aa4.68□□□□□ -1.66
PCDHB1-201ENST00000306549 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
PCDHB1-201ENST00000306549 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.66
PCDHB1-201ENST00000306549 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
PCDHB1-201ENST00000306549 TRRAPQ9Y4A5 3859 aa4.62□□□□□ -1.67
PCDHB1-201ENST00000306549 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
PCDHB1-201ENST00000306549 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
PCDHB1-201ENST00000306549 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
PCDHB1-201ENST00000306549 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
PCDHB1-201ENST00000306549 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
PCDHB1-201ENST00000306549 KRTAP11-1Q8IUC1 163 aa4.6□□□□□ -1.67
PCDHB1-201ENST00000306549 KRTAP10-8P60410 259 aa4.59□□□□□ -1.68
PCDHB1-201ENST00000306549 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
PCDHB1-201ENST00000306549 A8MU10 97 aa4.56□□□□□ -1.68
PCDHB1-201ENST00000306549 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
PCDHB1-201ENST00000306549 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
PCDHB1-201ENST00000306549 A0A1B0GVY2 172 aa4.54□□□□□ -1.68
PCDHB1-201ENST00000306549 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
PCDHB1-201ENST00000306549 P0C880 135 aa4.52□□□□□ -1.69
PCDHB1-201ENST00000306549 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
PCDHB1-201ENST00000306549 XP32Q5T750 250 aa4.5□□□□□ -1.69
PCDHB1-201ENST00000306549 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
PCDHB1-201ENST00000306549 CSMD1Q96PZ7 3565 aa4.46□□□□□ -1.7
PCDHB1-201ENST00000306549 AKAP9Q99996 3911 aa4.45□□□□□ -1.7
PCDHB1-201ENST00000306549 A6NN06 94 aa4.44□□□□□ -1.7
PCDHB1-201ENST00000306549 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
PCDHB1-201ENST00000306549 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
PCDHB1-201ENST00000306549 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
PCDHB1-201ENST00000306549 ZNF469Q96JG9 3925 aaPredicted RBP4.35□□□□□ -1.71
PCDHB1-201ENST00000306549 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
PCDHB1-201ENST00000306549 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.72
PCDHB1-201ENST00000306549 H0YAA0 97 aa4.23□□□□□ -1.73
PCDHB1-201ENST00000306549 CUBNO60494 3623 aa4.19□□□□□ -1.74
PCDHB1-201ENST00000306549 ALMS1Q8TCU4 4167 aa4.18□□□□□ -1.74
PCDHB1-201ENST00000306549 DNAH1Q9P2D7 4330 aa4.12□□□□□ -1.75
PCDHB1-201ENST00000306549 ANK2Q01484 3957 aa4.08□□□□□ -1.76
PCDHB1-201ENST00000306549 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
PCDHB1-201ENST00000306549 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
PCDHB1-201ENST00000306549 HUWE1Q7Z6Z7 4374 aaKnown RBP4.06□□□□□ -1.76
PCDHB1-201ENST00000306549 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
PCDHB1-201ENST00000306549 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
PCDHB1-201ENST00000306549 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
PCDHB1-201ENST00000306549 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
PCDHB1-201ENST00000306549 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
PCDHB1-201ENST00000306549 DNAH9Q9NYC9 4486 aa3.92□□□□□ -1.78
PCDHB1-201ENST00000306549 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
PCDHB1-201ENST00000306549 CMYA5Q8N3K9 4069 aa3.92□□□□□ -1.78
PCDHB1-201ENST00000306549 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
PCDHB1-201ENST00000306549 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
PCDHB1-201ENST00000306549 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms