RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 A6NN06 94 aa8.7□□□□□ -1.02
LRP8-201ENST00000306052 SEC61BP60468 96 aaKnown RBP8.69□□□□□ -1.02
LRP8-201ENST00000306052 TENM4Q6N022 2769 aa8.65□□□□□ -1.03
LRP8-201ENST00000306052 A8MU10 97 aa8.64□□□□□ -1.03
LRP8-201ENST00000306052 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
LRP8-201ENST00000306052 SPRR1BP22528 89 aa8.64□□□□□ -1.03
LRP8-201ENST00000306052 Q6ZR54 194 aa8.63□□□□□ -1.03
LRP8-201ENST00000306052 STAB2Q8WWQ8 2551 aa8.62□□□□□ -1.03
LRP8-201ENST00000306052 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
LRP8-201ENST00000306052 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
LRP8-201ENST00000306052 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
LRP8-201ENST00000306052 CELSR2Q9HCU4 2923 aa8.6□□□□□ -1.03
LRP8-201ENST00000306052 WDFY3Q8IZQ1 3526 aa8.59□□□□□ -1.03
LRP8-201ENST00000306052 LAMA5O15230 3695 aa8.59□□□□□ -1.03
LRP8-201ENST00000306052 DMBT1Q9UGM3 2413 aaPredicted RBP8.58□□□□□ -1.04
LRP8-201ENST00000306052 DMDP11532 3685 aa8.58□□□□□ -1.04
LRP8-201ENST00000306052 RELNP78509 3460 aa8.57□□□□□ -1.04
LRP8-201ENST00000306052 MUC3AQ02505 3323 aa8.57□□□□□ -1.04
LRP8-201ENST00000306052 KRTAP16-1A8MUX0 517 aa8.56□□□□□ -1.04
LRP8-201ENST00000306052 ZANQ9Y493 2812 aa8.55□□□□□ -1.04
LRP8-201ENST00000306052 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
LRP8-201ENST00000306052 KRTAP25-1Q3LHN0 102 aa8.52□□□□□ -1.05
LRP8-201ENST00000306052 PANO1I0J062 215 aa8.52□□□□□ -1.05
LRP8-201ENST00000306052 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.053e-6■■■■■ 31.4
LRP8-201ENST00000306052 ASH1LQ9NR48 2969 aaKnown RBP8.5□□□□□ -1.05
LRP8-201ENST00000306052 NBPF19A0A087WUL8 3843 aa8.5□□□□□ -1.05
LRP8-201ENST00000306052 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
LRP8-201ENST00000306052 A0A087X002 238 aa8.47□□□□□ -1.05
LRP8-201ENST00000306052 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
LRP8-201ENST00000306052 DCHS1Q96JQ0 3298 aa8.46□□□□□ -1.06
LRP8-201ENST00000306052 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
LRP8-201ENST00000306052 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.07
LRP8-201ENST00000306052 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
LRP8-201ENST00000306052 A8MUU9 505 aa8.36□□□□□ -1.07
LRP8-201ENST00000306052 NF1P21359 2839 aa8.36□□□□□ -1.07
LRP8-201ENST00000306052 FBN2P35556 2912 aa8.34□□□□□ -1.07
LRP8-201ENST00000306052 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
LRP8-201ENST00000306052 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
LRP8-201ENST00000306052 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
LRP8-201ENST00000306052 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
LRP8-201ENST00000306052 ZFHX3Q15911 3703 aa8.21□□□□□ -1.09
LRP8-201ENST00000306052 MXRA5Q9NR99 2828 aa8.18□□□□□ -1.1
LRP8-201ENST00000306052 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
LRP8-201ENST00000306052 SMG1Q96Q15 3661 aaKnown RBP8.18□□□□□ -1.1
LRP8-201ENST00000306052 TNP1P09430 55 aa8.14□□□□□ -1.11
LRP8-201ENST00000306052 PDZD2O15018 2839 aa8.11□□□□□ -1.11
LRP8-201ENST00000306052 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
LRP8-201ENST00000306052 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
LRP8-201ENST00000306052 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
LRP8-201ENST00000306052 KRTAP10-8P60410 259 aa8□□□□□ -1.13
LRP8-201ENST00000306052 SPENQ96T58 3664 aaKnown RBP8□□□□□ -1.13
LRP8-201ENST00000306052 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
LRP8-201ENST00000306052 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
LRP8-201ENST00000306052 PKD1L1Q8TDX9 2849 aa7.99□□□□□ -1.13
LRP8-201ENST00000306052 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
LRP8-201ENST00000306052 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
LRP8-201ENST00000306052 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.13
LRP8-201ENST00000306052 TENM3Q9P273 2699 aa7.95□□□□□ -1.14
LRP8-201ENST00000306052 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
LRP8-201ENST00000306052 H0YAA0 97 aa7.9□□□□□ -1.14
LRP8-201ENST00000306052 BSNQ9UPA5 3926 aa7.89□□□□□ -1.15
LRP8-201ENST00000306052 SVEP1Q4LDE5 3571 aa7.84□□□□□ -1.15
LRP8-201ENST00000306052 VWFP04275 2813 aa7.81□□□□□ -1.16
LRP8-201ENST00000306052 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
LRP8-201ENST00000306052 ANK3Q12955 4377 aaKnown RBP7.75□□□□□ -1.17
LRP8-201ENST00000306052 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
LRP8-201ENST00000306052 P0C880 135 aa7.7□□□□□ -1.18
LRP8-201ENST00000306052 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
LRP8-201ENST00000306052 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
LRP8-201ENST00000306052 TGP01266 2768 aa7.67□□□□□ -1.18
LRP8-201ENST00000306052 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
LRP8-201ENST00000306052 XP32Q5T750 250 aa7.64□□□□□ -1.19
LRP8-201ENST00000306052 CUBNO60494 3623 aa7.61□□□□□ -1.19
LRP8-201ENST00000306052 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
LRP8-201ENST00000306052 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
LRP8-201ENST00000306052 KRTAP13-3Q3SY46 172 aa7.44□□□□□ -1.22
LRP8-201ENST00000306052 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
LRP8-201ENST00000306052 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
LRP8-201ENST00000306052 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
LRP8-201ENST00000306052 ZNF469Q96JG9 3925 aaPredicted RBP7.35□□□□□ -1.23
LRP8-201ENST00000306052 AKAP9Q99996 3911 aa7.32□□□□□ -1.24
LRP8-201ENST00000306052 SRRM2Q9UQ35 2752 aaKnown RBP7.32□□□□□ -1.24
LRP8-201ENST00000306052 HUWE1Q7Z6Z7 4374 aaKnown RBP7.22□□□□□ -1.25
LRP8-201ENST00000306052 FBN3Q75N90 2809 aa7.18□□□□□ -1.26
LRP8-201ENST00000306052 KRTAP12-1P59990 96 aa7.15□□□□□ -1.27
LRP8-201ENST00000306052 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
LRP8-201ENST00000306052 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
LRP8-201ENST00000306052 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
LRP8-201ENST00000306052 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
LRP8-201ENST00000306052 KRTAP3-1Q9BYR8 98 aa7.06□□□□□ -1.28
LRP8-201ENST00000306052 ALMS1Q8TCU4 4167 aa7.01□□□□□ -1.29
LRP8-201ENST00000306052 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
LRP8-201ENST00000306052 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
LRP8-201ENST00000306052 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
LRP8-201ENST00000306052 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
LRP8-201ENST00000306052 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.31
LRP8-201ENST00000306052 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
LRP8-201ENST00000306052 INE1O15225 51 aa6.68□□□□□ -1.34
LRP8-201ENST00000306052 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
LRP8-201ENST00000306052 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms